BLASTX nr result

ID: Lithospermum22_contig00006798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006798
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146177.1| PREDICTED: rab proteins geranylgeranyltransf...    60   2e-07
gb|AAG51329.1|AC020580_9 Rab escort protein, putative; 48705-511...    60   2e-07
ref|XP_002884589.1| gdp dissociation inhibitor family protein [A...    60   2e-07
gb|AAM19852.1| AT3g06540/F5E6_13 [Arabidopsis thaliana] gi|23463...    60   2e-07
ref|NP_187306.2| Rab escort protein [Arabidopsis thaliana] gi|51...    60   2e-07

>ref|XP_004146177.1| PREDICTED: rab proteins geranylgeranyltransferase component A
           1-like [Cucumis sativus]
          Length = 543

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 36/65 (55%)
 Frame = -3

Query: 285 MEDISSYPPIEPSNFDXXXXXXXXXXXXXXXXXXXANKTVLHLDPNPFYGLHFTSLPLQH 106
           M D+S +P I+PS FD                   + KTVLHLDPNP+YG HF +LPL  
Sbjct: 1   MSDLSQHPLIDPSTFDLIVVGTGLPQSILAAAASASGKTVLHLDPNPYYGGHFATLPLHD 60

Query: 105 LVAFL 91
           L +FL
Sbjct: 61  LTSFL 65


>gb|AAG51329.1|AC020580_9 Rab escort protein, putative; 48705-51166 [Arabidopsis thaliana]
          Length = 536

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 35/65 (53%)
 Frame = -3

Query: 285 MEDISSYPPIEPSNFDXXXXXXXXXXXXXXXXXXXANKTVLHLDPNPFYGLHFTSLPLQH 106
           M DI  YPP++PSN+D                   +  +VLHLDPNPFYG HF SL L  
Sbjct: 1   MIDIPPYPPLDPSNYDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPD 60

Query: 105 LVAFL 91
           L +FL
Sbjct: 61  LTSFL 65


>ref|XP_002884589.1| gdp dissociation inhibitor family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330429|gb|EFH60848.1| gdp
           dissociation inhibitor family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 561

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 35/65 (53%)
 Frame = -3

Query: 285 MEDISSYPPIEPSNFDXXXXXXXXXXXXXXXXXXXANKTVLHLDPNPFYGLHFTSLPLQH 106
           M DI  YPP++PSN+D                   +  +VLHLDPNPFYG HF SL L  
Sbjct: 1   MIDIPPYPPLDPSNYDLIIVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPD 60

Query: 105 LVAFL 91
           L +FL
Sbjct: 61  LTSFL 65


>gb|AAM19852.1| AT3g06540/F5E6_13 [Arabidopsis thaliana] gi|23463085|gb|AAN33212.1|
           At3g06540/F5E6_13 [Arabidopsis thaliana]
          Length = 563

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 35/65 (53%)
 Frame = -3

Query: 285 MEDISSYPPIEPSNFDXXXXXXXXXXXXXXXXXXXANKTVLHLDPNPFYGLHFTSLPLQH 106
           M DI  YPP++PSN+D                   +  +VLHLDPNPFYG HF SL L  
Sbjct: 1   MIDIPPYPPLDPSNYDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPD 60

Query: 105 LVAFL 91
           L +FL
Sbjct: 61  LTSFL 65


>ref|NP_187306.2| Rab escort protein [Arabidopsis thaliana]
           gi|51317418|gb|AAN03631.2|AF409086_1 Rab escort protein
           [Arabidopsis thaliana] gi|332640889|gb|AEE74410.1| Rab
           escort protein [Arabidopsis thaliana]
          Length = 563

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 35/65 (53%)
 Frame = -3

Query: 285 MEDISSYPPIEPSNFDXXXXXXXXXXXXXXXXXXXANKTVLHLDPNPFYGLHFTSLPLQH 106
           M DI  YPP++PSN+D                   +  +VLHLDPNPFYG HF SL L  
Sbjct: 1   MIDIPPYPPLDPSNYDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPD 60

Query: 105 LVAFL 91
           L +FL
Sbjct: 61  LTSFL 65


Top