BLASTX nr result

ID: Lithospermum22_contig00006783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006783
         (1824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinif...   253   2e-64
emb|CBI25128.3| unnamed protein product [Vitis vinifera]              245   3e-62
ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-57
gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]        222   2e-55
ref|XP_004156873.1| PREDICTED: F-box protein SKIP22-like [Cucumi...   222   3e-55

>ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinifera]
            gi|147804806|emb|CAN73524.1| hypothetical protein
            VITISV_010705 [Vitis vinifera]
          Length = 563

 Score =  253 bits (645), Expect = 2e-64
 Identities = 147/339 (43%), Positives = 196/339 (57%), Gaps = 8/339 (2%)
 Frame = -2

Query: 1235 KSFSVPGFLRKVFTEELGNESGRDHKLLVIAVHAVLLDSELVAYDVVGRKEINGFLFRDE 1056
            KSFS P FLRKV  EE+G++ G +HKLLVIAVHAV+L+S  V +D V    ++ F   +E
Sbjct: 228  KSFSEPCFLRKVLREEVGDD-GNEHKLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEE 286

Query: 1055 WPLDLFNLRLFYTLPKSMNLSSNSAYSIESVCLKFHSLGDCVTVYGSLVNGNKSAVYRVS 876
            +P    ++ L+YTLP+ ++   + + +I+SV LKF  LG  + +YGSL +GN+S V+ VS
Sbjct: 287  YPFAAISMSLWYTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSL-SGNRSTVHWVS 345

Query: 875  FDEGKLVPFLNVVWANCGLNEEISFGVQGSGTNAEKEVFEFWRRVKDELALPMLIDLSEK 696
             DE +  P L+++W +    EE   G   S +  E EVFEFW+ VKD LALP+L DL EK
Sbjct: 346  LDEYRFAPTLDLMWTHSDSAEEKDRG--SSNSYPENEVFEFWKIVKDGLALPLLTDLCEK 403

Query: 695  YGFGLPACFMRLPTEIKLNILELLPGADVARVGCACSELRYLSSSDELWKKKYAEQFGDA 516
             G   P C MRLPTE+KL ILELLPG D+ +VGC CSEL YLSS+++LWK+K+ E+FG+ 
Sbjct: 404  GGLLPPPCLMRLPTELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFTEEFGNV 463

Query: 515  VKAGDEGHWKSKFVRYWETNXXXXXXXXXXXXXRMPPPRMPSIVGGVHDIWPHV--QIIG 342
                    WK KF  +WE                 P    PS      D  P      IG
Sbjct: 464  RVGQGFSLWKDKFATWWENR--KKRKRVSGMCTWFPSLEAPSYFPIRRDPNPFAIPPTIG 521

Query: 341  GDYDR--XXXXXXXXXXXXGRHHQ----ASQVPRCNLGG 243
            GDYD                R+H+     + +PRCNLGG
Sbjct: 522  GDYDHFPALGIPSPFGQPGRRYHRFLAPRNTIPRCNLGG 560



 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = -1

Query: 1818 LHLSLNRKDEIQIDSSTENITITLQSLGITNGDLIFFTFNPLGFN 1684
            ++LSLNRKDE+Q+ SS +    TLQSLG+T+GDLIF++FNP  F+
Sbjct: 46   IYLSLNRKDELQVSSSLD----TLQSLGVTSGDLIFYSFNPTAFS 86


>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score =  245 bits (625), Expect = 3e-62
 Identities = 138/304 (45%), Positives = 183/304 (60%), Gaps = 2/304 (0%)
 Frame = -2

Query: 1235 KSFSVPGFLRKVFTEELGNESGRDHKLLVIAVHAVLLDSELVAYDVVGRKEINGFLFRDE 1056
            KSFS P FLRKV  EE+G++ G +HKLLVIAVHAV+L+S  V +D V    ++ F   +E
Sbjct: 166  KSFSEPCFLRKVLREEVGDD-GNEHKLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEE 224

Query: 1055 WPLDLFNLRLFYTLPKSMNLSSNSAYSIESVCLKFHSLGDCVTVYGSLVNGNKSAVYRVS 876
            +P    ++ L+YTLP+ ++   + + +I+SV LKF  LG  + +YGSL +GN+S V+ VS
Sbjct: 225  YPFAAISMSLWYTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSL-SGNRSTVHWVS 283

Query: 875  FDEGKLVPFLNVVWANCGLNEEISFGVQGSGTNAEKEVFEFWRRVKDELALPMLIDLSEK 696
             DE +  P L+++W +    EE   G   S +  E EVFEFW+ VKD LALP+L DL EK
Sbjct: 284  LDEYRFAPTLDLMWTHSDSAEEKDRG--SSNSYPENEVFEFWKIVKDGLALPLLTDLCEK 341

Query: 695  YGFGLPACFMRLPTEIKLNILELLPGADVARVGCACSELRYLSSSDELWKKKYAEQFGDA 516
             G   P C MRLPTE+KL ILELLPG D+ +VGC CSEL YLSS+++LWK+K+ E+FG+ 
Sbjct: 342  GGLLPPPCLMRLPTELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFTEEFGNV 401

Query: 515  VKAGDEGHWKSKFVRYWETNXXXXXXXXXXXXXRMPPPRMPSIVGGVHDIWPHV--QIIG 342
                    WK KF  +WE                 P    PS      D  P      IG
Sbjct: 402  RVGQGFSLWKDKFATWWENR--KKRKRVSGMCTWFPSLEAPSYFPIRRDPNPFAIPPTIG 459

Query: 341  GDYD 330
            GDYD
Sbjct: 460  GDYD 463



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = -1

Query: 1818 LHLSLNRKDEIQIDSSTENITITLQSLGITNGDLIFFTFNPLGFNSCFQDSNFMQSGVEN 1639
            ++LSLNRKDE+Q+ SS +    TLQSLG+T+GDLIF++FNP  F+     S  + S  E 
Sbjct: 46   IYLSLNRKDELQVSSSLD----TLQSLGVTSGDLIFYSFNPTAFSQTPIPSETLVSNSER 101

Query: 1638 ELVMEKGAQVTP 1603
            +  + +   + P
Sbjct: 102  KETLLESQTLAP 113


>ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|222836821|gb|EEE75214.1|
            predicted protein [Populus trichocarpa]
          Length = 545

 Score =  229 bits (583), Expect = 2e-57
 Identities = 137/337 (40%), Positives = 190/337 (56%), Gaps = 6/337 (1%)
 Frame = -2

Query: 1235 KSFSVPGFLRKVFTEELGNESGRDHKLLVIAVHAVLLDSELVAYDVVGRKEINGFLFRDE 1056
            K FS P FLR++  +ELG++ G ++KLLVIAVHAV ++S  V ++ +    ++GF   +E
Sbjct: 218  KRFSEPYFLRRLLRKELGDD-GSNYKLLVIAVHAVFIESGFVGFNSISGMRVDGFHLPEE 276

Query: 1055 WPLDLFNLRLFYTLPKSMNLSSNSAYSIESVCLKFHSLGDCVTVYGSLVNGNKSAVYRVS 876
                   + L YTLP+ ++    S    E++ LK  SLG  V VYGSL  G  S +Y   
Sbjct: 277  QSSRNLAVSLCYTLPELLD----SKVIAETIVLKLQSLGHFVNVYGSLSKGG-SGLYHAR 331

Query: 875  FDEGKLVPFLNVVWANCGLNEEISFGVQGSGTNAEKEVFEFWRRVKDELALPMLIDLSEK 696
             D  K VP ++ VW N   N+ ++   + S    E E+FEFW+ VKD LALP+LID+ EK
Sbjct: 332  LDINKFVPAIDFVWEN-DKNDGMNGSDRSSILYPENEIFEFWKIVKDGLALPLLIDICEK 390

Query: 695  YGFGLPACFMRLPTEIKLNILELLPGADVARVGCACSELRYLSSSDELWKKKYAEQFGDA 516
             G  LP+C MRLPTE+KL I ELLP  D+A++ C CSE+RYLSS+++LWK+K+ E+FGD 
Sbjct: 391  AGLVLPSCLMRLPTELKLKIFELLPAIDIAKMECVCSEMRYLSSNNDLWKQKFVEEFGDG 450

Query: 515  VKAGDEGHWKSKFVRYWETNXXXXXXXXXXXXXRMPPPRMPSIVGGVHDIWPHVQIIGGD 336
              A    +WK++F  YWE               +  P  +P I    + +W    IIGGD
Sbjct: 451  TAAHGTLNWKARFASYWENKKRKRDFNAWQEYRQFLPFHVP-IRRDPNPLW-CPSIIGGD 508

Query: 335  YDR------XXXXXXXXXXXXGRHHQASQVPRCNLGG 243
            YDR                   RH+ +   P CNLGG
Sbjct: 509  YDRLPGLGIPPYRRPGIGWPQPRHNFS---PNCNLGG 542


>gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]
          Length = 502

 Score =  222 bits (566), Expect = 2e-55
 Identities = 133/299 (44%), Positives = 172/299 (57%), Gaps = 9/299 (3%)
 Frame = -2

Query: 1235 KSFSVPGFLRKVFTEELGNESGRDHKLLVIAVHAVLLDSELVAYDVVGRKEINGFLFRDE 1056
            K  S P FLR+V  EELG +    HKLLV AVHAVLL+S  V  +     E + F   ++
Sbjct: 176  KKCSRPIFLRRVLKEELGYDRNA-HKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPED 234

Query: 1055 WPLDLFNLRLFYTLPKSMNLSSNSAYSIESVCLKFHSLGDCVTVYGSLVNGNKSAVYRVS 876
            WP   F + L+YTLP+ +     ++   E V LKF SLG  V VYGSL     S+VYRVS
Sbjct: 235  WPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVS 294

Query: 875  FDEGKLVPFLNVVWANCGLNEEISFGVQGSGTNAEKEVFEFWRRVKDELALPMLIDLSEK 696
             DE K  P L+++W +   N    + +     N EK+VFEFW+ VKD LALP+LID+ EK
Sbjct: 295  LDERKFAPNLDLIWVDSVSN----YIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEK 350

Query: 695  YGFGLPACFMRLPTEIKLNILELLPGADVARVGCACSELRYLSSSDELWKKKYAEQFGDA 516
             G   PA FM LP ++KL ILE LPG D+ARV C C+ELRYL+SS+ELWK K+ ++FG  
Sbjct: 351  TGLPPPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLE 410

Query: 515  VKAGDEGHWKSKFVRYWE---------TNXXXXXXXXXXXXXRMPPPRMPSIVGGVHDI 366
                    WK+KFV Y+E         +N               P P +P I+GG +DI
Sbjct: 411  DGVSGNRVWKTKFVEYYEREKQRNRRTSNMRDAISFGRHRRPPYPFP-VPHIIGGDYDI 468



 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 37/86 (43%), Positives = 49/86 (56%)
 Frame = -1

Query: 1824 ESLHLSLNRKDEIQIDSSTENITITLQSLGITNGDLIFFTFNPLGFNSCFQDSNFMQSGV 1645
            +SLHLSLNRKDE+Q  S  ++    L SLGIT+GDL+FFTF P  F+S    +  +QS  
Sbjct: 42   DSLHLSLNRKDELQASSPEDS----LHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQ 97

Query: 1644 ENELVMEKGAQVTPESSIFEQIRDAQ 1567
               L    G+     SS   Q++  Q
Sbjct: 98   PPPL---SGSSSLVSSSSLPQVKGKQ 120


>ref|XP_004156873.1| PREDICTED: F-box protein SKIP22-like [Cucumis sativus]
          Length = 499

 Score =  222 bits (565), Expect = 3e-55
 Identities = 131/302 (43%), Positives = 174/302 (57%), Gaps = 9/302 (2%)
 Frame = -2

Query: 1226 SVPGFLRKVFTEELGNESGRDHKLLVIAVHAVLLDSELVAYDVVGRKEINGFLFRDEWPL 1047
            S P FLR+V  EELG +    HKLLV AVHAVLL+S  V  +     + + F   ++WP 
Sbjct: 176  SRPIFLRRVLKEELGYDRNA-HKLLVTAVHAVLLESGFVLINPNLGFDDSSFRMPEDWPS 234

Query: 1046 DLFNLRLFYTLPKSMNLSSNSAYSIESVCLKFHSLGDCVTVYGSLVNGNKSAVYRVSFDE 867
              F + L+YTLP+ +     ++   E V LKF SLG  V VYGSL     S+VYRVS DE
Sbjct: 235  PSFTMSLWYTLPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVYRVSLDE 294

Query: 866  GKLVPFLNVVWANCGLNEEISFGVQGSGTNAEKEVFEFWRRVKDELALPMLIDLSEKYGF 687
             K  P L+++W +   N    + +     N EK+VFEFW+ VKD LALP+LID+ EK G 
Sbjct: 295  RKFAPNLDLIWVDSVSN----YIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGL 350

Query: 686  GLPACFMRLPTEIKLNILELLPGADVARVGCACSELRYLSSSDELWKKKYAEQFGDAVKA 507
              PA FM LP ++KL ILE L G D+ARV C C+ELRYL+SS+ELWK K+ ++FG     
Sbjct: 351  PPPASFMLLPADVKLKILEALTGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGV 410

Query: 506  GDEGHWKSKFVRYWE---------TNXXXXXXXXXXXXXRMPPPRMPSIVGGVHDIWPHV 354
                +WK+KFV Y+E         +N               P P +P I+GG  DI P +
Sbjct: 411  SGNRNWKAKFVEYYEKEKQRNRRTSNMRDLINFGRRRRPPYPFP-VPHIIGGDFDIVPGI 469

Query: 353  QI 348
            ++
Sbjct: 470  RL 471


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