BLASTX nr result

ID: Lithospermum22_contig00006725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006725
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511173.1| sec61 gamma subunit, putative [Ricinus commu...   105   4e-21
ref|NP_194222.1| protein transport protein sec61 subunit gamma-1...   105   5e-21
ref|XP_002270423.1| PREDICTED: protein transport protein Sec61 s...   103   1e-20
ref|XP_004145664.1| PREDICTED: protein transport protein Sec61 s...   103   1e-20
ref|XP_002318732.1| predicted protein [Populus trichocarpa] gi|1...   102   2e-20

>ref|XP_002511173.1| sec61 gamma subunit, putative [Ricinus communis]
           gi|223550288|gb|EEF51775.1| sec61 gamma subunit,
           putative [Ricinus communis]
          Length = 69

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/68 (79%), Positives = 56/68 (82%)
 Frame = -2

Query: 368 MDAIDNVFDPLRDFAKDSVRLVKRCHKPDRKEFTKVATRTAIXXXXXXXXXXXVKLIFIP 189
           MDA+DNVFDPLRDFAKDSVRLVKRCHKPDRKEFTKVA RTAI           VKLIFIP
Sbjct: 1   MDALDNVFDPLRDFAKDSVRLVKRCHKPDRKEFTKVAFRTAIGFVVMGFVGFFVKLIFIP 60

Query: 188 INNIIVGA 165
           INNIIVG+
Sbjct: 61  INNIIVGS 68


>ref|NP_194222.1| protein transport protein sec61 subunit gamma-1 [Arabidopsis
           thaliana] gi|18423153|ref|NP_568728.1| protein transport
           protein sec61 subunit gamma-1 [Arabidopsis thaliana]
           gi|297795847|ref|XP_002865808.1| hypothetical protein
           ARALYDRAFT_495113 [Arabidopsis lyrata subsp. lyrata]
           gi|297799504|ref|XP_002867636.1| hypothetical protein
           ARALYDRAFT_492346 [Arabidopsis lyrata subsp. lyrata]
           gi|408407792|sp|P0DI74.1|S61G1_ARATH RecName:
           Full=Protein transport protein Sec61 subunit gamma-1
           gi|408407793|sp|P0DI75.1|S61G2_ARATH RecName:
           Full=Protein transport protein Sec61 subunit gamma-2
           gi|13877813|gb|AAK43984.1|AF370169_1 putative protein
           translocation complex Sec61 gamma chain [Arabidopsis
           thaliana] gi|4455235|emb|CAB36734.1| PROTEIN TRANSPORT
           PROTEIN SEC61 GAMMA SUBUNIT-like [Arabidopsis thaliana]
           gi|7269342|emb|CAB79401.1| PROTEIN TRANSPORT PROTEIN
           SEC61 GAMMA SUBUNIT-like [Arabidopsis thaliana]
           gi|9758755|dbj|BAB09131.1| protein translocation complex
           Sec61 gamma chain [Arabidopsis thaliana]
           gi|16323486|gb|AAL15237.1| putative protein
           translocation complex Sec61 gamma chain [Arabidopsis
           thaliana] gi|20466392|gb|AAM20513.1| protein transport
           protein SEC61 gamma subunit-like [Arabidopsis thaliana]
           gi|22136344|gb|AAM91250.1| protein transport protein
           SEC61 gamma subunit-like [Arabidopsis thaliana]
           gi|297311643|gb|EFH42067.1| hypothetical protein
           ARALYDRAFT_495113 [Arabidopsis lyrata subsp. lyrata]
           gi|297313472|gb|EFH43895.1| hypothetical protein
           ARALYDRAFT_492346 [Arabidopsis lyrata subsp. lyrata]
           gi|332008565|gb|AED95948.1| protein transport protein
           sec61 subunit gamma-1 [Arabidopsis thaliana]
           gi|332659576|gb|AEE84976.1| protein transport protein
           sec61 subunit gamma-1 [Arabidopsis thaliana]
          Length = 69

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/69 (78%), Positives = 56/69 (81%)
 Frame = -2

Query: 368 MDAIDNVFDPLRDFAKDSVRLVKRCHKPDRKEFTKVATRTAIXXXXXXXXXXXVKLIFIP 189
           MDAID+V DPLRDFAKDS+RLVKRCHKPDRKEFTKVA RTAI           VKLIFIP
Sbjct: 1   MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 188 INNIIVGAT 162
           INNIIVGAT
Sbjct: 61  INNIIVGAT 69


>ref|XP_002270423.1| PREDICTED: protein transport protein Sec61 subunit gamma isoform 1
           [Vitis vinifera] gi|359488485|ref|XP_003633765.1|
           PREDICTED: protein transport protein Sec61 subunit gamma
           isoform 2 [Vitis vinifera] gi|147815338|emb|CAN67771.1|
           hypothetical protein VITISV_010522 [Vitis vinifera]
           gi|296082338|emb|CBI21343.3| unnamed protein product
           [Vitis vinifera]
          Length = 69

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/68 (77%), Positives = 56/68 (82%)
 Frame = -2

Query: 368 MDAIDNVFDPLRDFAKDSVRLVKRCHKPDRKEFTKVATRTAIXXXXXXXXXXXVKLIFIP 189
           MDAIDNVFDP+R+FAKDSVRLVKRCHKPDRKEFTKVA RTAI           VKLIFIP
Sbjct: 1   MDAIDNVFDPMREFAKDSVRLVKRCHKPDRKEFTKVAFRTAIGFVVMGFVGFFVKLIFIP 60

Query: 188 INNIIVGA 165
           INNIIVG+
Sbjct: 61  INNIIVGS 68


>ref|XP_004145664.1| PREDICTED: protein transport protein Sec61 subunit gamma-like
           isoform 1 [Cucumis sativus]
           gi|449455854|ref|XP_004145665.1| PREDICTED: protein
           transport protein Sec61 subunit gamma-like isoform 2
           [Cucumis sativus] gi|449502009|ref|XP_004161518.1|
           PREDICTED: protein transport protein Sec61 subunit
           gamma-like isoform 1 [Cucumis sativus]
           gi|449502012|ref|XP_004161519.1| PREDICTED: protein
           transport protein Sec61 subunit gamma-like isoform 2
           [Cucumis sativus]
          Length = 69

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/68 (77%), Positives = 56/68 (82%)
 Frame = -2

Query: 368 MDAIDNVFDPLRDFAKDSVRLVKRCHKPDRKEFTKVATRTAIXXXXXXXXXXXVKLIFIP 189
           MDAID+VFDPLR+FAKDSVRLVKRCHKPDRKEFTKVA RTAI           VKLIFIP
Sbjct: 1   MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 188 INNIIVGA 165
           INNIIVG+
Sbjct: 61  INNIIVGS 68


>ref|XP_002318732.1| predicted protein [Populus trichocarpa] gi|118482351|gb|ABK93099.1|
           unknown [Populus trichocarpa]
           gi|222859405|gb|EEE96952.1| predicted protein [Populus
           trichocarpa]
          Length = 69

 Score =  102 bits (255), Expect = 2e-20
 Identities = 53/69 (76%), Positives = 57/69 (82%)
 Frame = -2

Query: 368 MDAIDNVFDPLRDFAKDSVRLVKRCHKPDRKEFTKVATRTAIXXXXXXXXXXXVKLIFIP 189
           MDAID+V DPLR+FAKDSVRLVKRCHKPD+KEFTKVATRTAI           VKLIFIP
Sbjct: 1   MDAIDSVVDPLREFAKDSVRLVKRCHKPDQKEFTKVATRTAIGFVVMGFVGFFVKLIFIP 60

Query: 188 INNIIVGAT 162
           INNIIVGA+
Sbjct: 61  INNIIVGAS 69


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