BLASTX nr result

ID: Lithospermum22_contig00006680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006680
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   429   e-118
ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent R...   419   e-115
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   408   e-111
ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...   405   e-111

>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
            [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
            protein product [Vitis vinifera]
          Length = 754

 Score =  429 bits (1102), Expect = e-118
 Identities = 205/274 (74%), Positives = 247/274 (90%)
 Frame = -1

Query: 864  VIKGSKNNRNMRISPAYVLIICPTRELASQIAAEVTVLLKYHDGVGVQMLVGGTRFKVDQ 685
            V+K + +NR  R+ P  VLI+CPTRE+ASQIAAE  V+LKYHDG+GVQ L+GGTRFK DQ
Sbjct: 347  VLKATSSNRIQRVPPILVLILCPTREIASQIAAEANVMLKYHDGIGVQTLIGGTRFKFDQ 406

Query: 684  KRLESDPCQMIVATPGRLLDHIENKSGFSLRLMGLRMLILDEADHLLDLGFRKDIEKILD 505
            KRLESDPCQ+IVATPGRLLDHIENK  FS+RLMGL+ML+LDEADHLLDLGFRKD+EKI+D
Sbjct: 407  KRLESDPCQIIVATPGRLLDHIENKGSFSVRLMGLKMLVLDEADHLLDLGFRKDMEKIVD 466

Query: 504  CLPRQRQSLLFSATIPKEVRRVSQVVLKRDHAYIDTVGLHGLETNAKVRQAYFVAPHVEH 325
            CLPRQRQSLLFSAT+PKEVRR+SQ+VLK++HA++DTVGL   ET+AKVRQ+Y VAPH  H
Sbjct: 467  CLPRQRQSLLFSATVPKEVRRISQLVLKKEHAFVDTVGLGNAETHAKVRQSYLVAPHKLH 526

Query: 324  FQIVHHLLEKHILEVVDYKVVIFCNTSMMSTLMFSLFREMKLNVREMHSRKPQIARTRTS 145
            FQIV+HLL+ HIL+V DYKV++FC T+M+++L+F L +EMK+NVRE+HSRKPQI RTR S
Sbjct: 527  FQIVYHLLKDHILQVPDYKVIVFCTTAMVTSLVFLLLQEMKVNVREIHSRKPQIYRTRIS 586

Query: 144  DEFKESKRLVLITSDVSARGINYPNVTLVIQVNV 43
            +EF+ESKRLVLITSDVSARGINYP+VTLVIQ+ +
Sbjct: 587  EEFRESKRLVLITSDVSARGINYPDVTLVIQMGI 620


>ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
            [Glycine max]
          Length = 707

 Score =  419 bits (1076), Expect = e-115
 Identities = 198/274 (72%), Positives = 243/274 (88%)
 Frame = -1

Query: 864  VIKGSKNNRNMRISPAYVLIICPTRELASQIAAEVTVLLKYHDGVGVQMLVGGTRFKVDQ 685
            V+K   +N + R+ P YVLI+CPTRELASQIAA   VLLKYH+ +GVQ LVGG RFKVDQ
Sbjct: 300  VLKAMSSNTSQRVPPIYVLILCPTRELASQIAAVAKVLLKYHETIGVQTLVGGIRFKVDQ 359

Query: 684  KRLESDPCQMIVATPGRLLDHIENKSGFSLRLMGLRMLILDEADHLLDLGFRKDIEKILD 505
            KRLESDPCQ++VATPGRLLDHIENKSG SLRLMGLRML+LDEADHLLDLGFRKD+EKI+D
Sbjct: 360  KRLESDPCQILVATPGRLLDHIENKSGISLRLMGLRMLVLDEADHLLDLGFRKDVEKIVD 419

Query: 504  CLPRQRQSLLFSATIPKEVRRVSQVVLKRDHAYIDTVGLHGLETNAKVRQAYFVAPHVEH 325
            CLPRQRQSLLFSAT+PKEVRRVSQ+VLKR+H Y+DTVG+  +ET  KV+Q+Y +APH  H
Sbjct: 420  CLPRQRQSLLFSATMPKEVRRVSQLVLKREHKYVDTVGMGCVETPVKVKQSYLIAPHESH 479

Query: 324  FQIVHHLLEKHILEVVDYKVVIFCNTSMMSTLMFSLFREMKLNVREMHSRKPQIARTRTS 145
            FQ+VH +L++HIL+  DYKV++FC T M+++LM++L REMK+NVRE+HSRKPQ+ RTR S
Sbjct: 480  FQLVHQILKEHILQTPDYKVIVFCVTGMVTSLMYNLLREMKMNVREIHSRKPQLYRTRIS 539

Query: 144  DEFKESKRLVLITSDVSARGINYPNVTLVIQVNV 43
            DEF+ESK+L+L++SDVS+RG+NYP+VTLVIQV +
Sbjct: 540  DEFRESKQLILVSSDVSSRGMNYPDVTLVIQVGI 573


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  411 bits (1056), Expect = e-112
 Identities = 196/274 (71%), Positives = 241/274 (87%)
 Frame = -1

Query: 864  VIKGSKNNRNMRISPAYVLIICPTRELASQIAAEVTVLLKYHDGVGVQMLVGGTRFKVDQ 685
            V+K + +N   ++SP Y LI+CPTRELASQIAAE   +LKYHDG+GV  LVGGTRFK DQ
Sbjct: 391  VLKATSSNDKPQVSPIYALILCPTRELASQIAAEANAMLKYHDGIGVLTLVGGTRFKDDQ 450

Query: 684  KRLESDPCQMIVATPGRLLDHIENKSGFSLRLMGLRMLILDEADHLLDLGFRKDIEKILD 505
            +RLESDP Q+IVATPGRLLDHIENK G S+ LMGL++LILDEADHLLDLGFRKD+EKILD
Sbjct: 451  RRLESDPYQIIVATPGRLLDHIENKGGLSVHLMGLKVLILDEADHLLDLGFRKDMEKILD 510

Query: 504  CLPRQRQSLLFSATIPKEVRRVSQVVLKRDHAYIDTVGLHGLETNAKVRQAYFVAPHVEH 325
            CLPRQRQSLLFSATIPKEVRR+SQ+VLKR+HA+I+TVG+  +ET AK++Q++ V+PH  H
Sbjct: 511  CLPRQRQSLLFSATIPKEVRRISQLVLKREHAFINTVGVGCVETPAKIKQSFLVSPHRLH 570

Query: 324  FQIVHHLLEKHILEVVDYKVVIFCNTSMMSTLMFSLFREMKLNVREMHSRKPQIARTRTS 145
            FQ+VHHLL++HIL+  DYKV++FC T M+++LM+ L REM +NVREMHSRKPQ+ RTR S
Sbjct: 571  FQVVHHLLKEHILQAPDYKVIVFCTTGMVTSLMYLLLREMNMNVREMHSRKPQLYRTRVS 630

Query: 144  DEFKESKRLVLITSDVSARGINYPNVTLVIQVNV 43
            +EF+ESKRL+L+TSDVSARG+NYP+VTLVIQV +
Sbjct: 631  NEFRESKRLILVTSDVSARGMNYPDVTLVIQVGI 664


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 771

 Score =  408 bits (1048), Expect = e-111
 Identities = 193/274 (70%), Positives = 237/274 (86%)
 Frame = -1

Query: 864  VIKGSKNNRNMRISPAYVLIICPTRELASQIAAEVTVLLKYHDGVGVQMLVGGTRFKVDQ 685
            V+K   +N   R+SP YVLI+CPTRELASQIAAE   +LKYHDG+ VQ LVGGTRFK DQ
Sbjct: 364  VLKAKSSNVKPRVSPIYVLILCPTRELASQIAAEANAMLKYHDGISVQTLVGGTRFKDDQ 423

Query: 684  KRLESDPCQMIVATPGRLLDHIENKSGFSLRLMGLRMLILDEADHLLDLGFRKDIEKILD 505
            KRLE +PCQ+IVATPGRLLDHIENK G S+ LMGL+MLILDEADHLLDLGFRKD+EKI+D
Sbjct: 424  KRLEMNPCQIIVATPGRLLDHIENKGGLSVHLMGLKMLILDEADHLLDLGFRKDVEKIID 483

Query: 504  CLPRQRQSLLFSATIPKEVRRVSQVVLKRDHAYIDTVGLHGLETNAKVRQAYFVAPHVEH 325
            CLPR+R SL+FSATIPKEVRR+SQ+VLKR+HA+IDTVGL  +ET +KV+Q   V PH  H
Sbjct: 484  CLPRERHSLMFSATIPKEVRRISQLVLKREHAFIDTVGLGSVETPSKVKQFSVVVPHELH 543

Query: 324  FQIVHHLLEKHILEVVDYKVVIFCNTSMMSTLMFSLFREMKLNVREMHSRKPQIARTRTS 145
            FQ+VHH L++HIL+  DYKV++FC T M+++LM++L REMK+NV+E+HSRKPQ+ RTR S
Sbjct: 544  FQVVHHFLKEHILQTPDYKVIVFCTTGMVTSLMYTLLREMKMNVKEIHSRKPQLYRTRVS 603

Query: 144  DEFKESKRLVLITSDVSARGINYPNVTLVIQVNV 43
            DEF+ES+R +L++SDVSARG+NYP+VTLVIQV +
Sbjct: 604  DEFRESRRSILVSSDVSARGMNYPDVTLVIQVGL 637


>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  405 bits (1040), Expect = e-111
 Identities = 192/274 (70%), Positives = 238/274 (86%)
 Frame = -1

Query: 864  VIKGSKNNRNMRISPAYVLIICPTRELASQIAAEVTVLLKYHDGVGVQMLVGGTRFKVDQ 685
            V+K   +N  +R+SP YVLI+CPTRELASQIAAE   +LKYHDG+ +Q LVGGTRFK DQ
Sbjct: 377  VLKARSSNAKLRVSPIYVLILCPTRELASQIAAEANAILKYHDGIVMQTLVGGTRFKDDQ 436

Query: 684  KRLESDPCQMIVATPGRLLDHIENKSGFSLRLMGLRMLILDEADHLLDLGFRKDIEKILD 505
            + LESDPCQ++VATPGRLLDHIENKSG S+ L GL+MLILDEADHLLDLGFRKD+EKI+D
Sbjct: 437  RCLESDPCQILVATPGRLLDHIENKSGLSMHLKGLKMLILDEADHLLDLGFRKDVEKIVD 496

Query: 504  CLPRQRQSLLFSATIPKEVRRVSQVVLKRDHAYIDTVGLHGLETNAKVRQAYFVAPHVEH 325
            CLPRQRQSLLFSATIPKEV R+SQ+VLKR+H +++TVG+  +ET AK++Q++ V+PH  H
Sbjct: 497  CLPRQRQSLLFSATIPKEVHRISQLVLKREHDFVNTVGVSCMETPAKIKQSFLVSPHELH 556

Query: 324  FQIVHHLLEKHILEVVDYKVVIFCNTSMMSTLMFSLFREMKLNVREMHSRKPQIARTRTS 145
            FQ+VH+LL++HI +  DYKV++FC T M+++LM+ L REMK+NVREMHSRKPQ+ RTR S
Sbjct: 557  FQVVHYLLKEHIQKAPDYKVIVFCTTGMVTSLMYLLLREMKMNVREMHSRKPQLYRTRVS 616

Query: 144  DEFKESKRLVLITSDVSARGINYPNVTLVIQVNV 43
            DEF+ES RLVL+TSDVSA G+NYP+VTLVIQV +
Sbjct: 617  DEFQESNRLVLVTSDVSACGMNYPDVTLVIQVGI 650


Top