BLASTX nr result

ID: Lithospermum22_contig00006574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006574
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284108.1| PREDICTED: dof zinc finger protein DOF3.4 [V...    87   1e-15
gb|ADL36687.1| DOF domain class transcription factor [Malus x do...    86   2e-15
ref|XP_002522358.1| zinc finger protein, putative [Ricinus commu...    86   4e-15
gb|ADL36686.1| DOF domain class transcription factor [Malus x do...    84   9e-15
ref|XP_002302449.1| f-box family protein [Populus trichocarpa] g...    84   9e-15

>ref|XP_002284108.1| PREDICTED: dof zinc finger protein DOF3.4 [Vitis vinifera]
          Length = 226

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 51/112 (45%), Positives = 62/112 (55%)
 Frame = -3

Query: 511 NNYNLSQPRHFCKSCRRYWTRGGTLRNVPIGGGTXXXXXXSNKRPRTDSATSAPSSAQEV 332
           NNYNLSQPRHFCKSCRRYWT+GGTLRN+P+GGGT      ++KR RT  ATS+ SS  E 
Sbjct: 42  NNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGT----RKNSKRSRT--ATSSSSSTLET 95

Query: 331 LNSLPVQEMXXXXXXXXXXXXXXXGFEMNLNEALPENNGSFSSLLNGDMHGG 176
             + P+                     +      P+ NG     LNGD+ GG
Sbjct: 96  TPANPISVSPV----------------LKAETETPQRNG---LSLNGDVSGG 128


>gb|ADL36687.1| DOF domain class transcription factor [Malus x domestica]
          Length = 248

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
 Frame = -3

Query: 511 NNYNLSQPRHFCKSCRRYWTRGGTLRNVPIGGGTXXXXXXSNKRPRTDSATSAPSSA--- 341
           NNYNL+QPRHFCKSCRRYWT GGTLRNVP+GGG+         RP   S++ +PSS+   
Sbjct: 49  NNYNLAQPRHFCKSCRRYWTHGGTLRNVPVGGGS--RKNTKRSRPSCSSSSGSPSSSSLT 106

Query: 340 QEVL-------NSLPVQEMXXXXXXXXXXXXXXXGFEMNLNEALPENNGSFSSLLN 194
           QEV        NS PV+                    M+LNE+    NG F+SLL+
Sbjct: 107 QEVSSVAPDKPNSFPVEPKPETATDHEKL--------MDLNES-AVGNGGFTSLLS 153


>ref|XP_002522358.1| zinc finger protein, putative [Ricinus communis]
           gi|223538436|gb|EEF40042.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 245

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/66 (60%), Positives = 47/66 (71%)
 Frame = -3

Query: 511 NNYNLSQPRHFCKSCRRYWTRGGTLRNVPIGGGTXXXXXXSNKRPRTDSATSAPSSAQEV 332
           NNYN SQPRHFCKSCRRYWT GGTLR++PIGGGT        KR RT SA   P ++  V
Sbjct: 47  NNYNFSQPRHFCKSCRRYWTHGGTLRDIPIGGGTRKNA----KRSRTSSAVVGPITSNPV 102

Query: 331 LNSLPV 314
            ++LP+
Sbjct: 103 DHNLPL 108


>gb|ADL36686.1| DOF domain class transcription factor [Malus x domestica]
          Length = 241

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/118 (40%), Positives = 62/118 (52%)
 Frame = -3

Query: 511 NNYNLSQPRHFCKSCRRYWTRGGTLRNVPIGGGTXXXXXXSNKRPRTDSATSAPSSAQEV 332
           NNYN SQPRHFCKSCRRYWT GGTLR++P+GGGT         R  T + T+  +S    
Sbjct: 51  NNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGT--RKNTKRSRTATSATTTTATSDNNA 108

Query: 331 LNSLPVQEMXXXXXXXXXXXXXXXGFEMNLNEALPENNGSFSSLLNGDMHGGGLFWGG 158
           +++ PV                   ++ N+       +GSF+SLLN    GG L  GG
Sbjct: 109 ISATPV-----FLNPGGGAALQFGDWKGNMGNGC-GGDGSFNSLLNTHGPGGFLALGG 160


>ref|XP_002302449.1| f-box family protein [Populus trichocarpa]
           gi|222844175|gb|EEE81722.1| f-box family protein
           [Populus trichocarpa]
          Length = 306

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 53/138 (38%), Positives = 69/138 (50%), Gaps = 21/138 (15%)
 Frame = -3

Query: 511 NNYNLSQPRHFCKSCRRYWTRGGTLRNVPIGGGTXXXXXXSNKRPRTDSATSAPSSAQEV 332
           NNYNLSQPR+FCKSCRRYWT+GGTLR+VP+GGG+       +KR R+ S  S+PS++   
Sbjct: 46  NNYNLSQPRYFCKSCRRYWTKGGTLRDVPVGGGSRKN----SKRSRSSSNNSSPSTSSSN 101

Query: 331 LN-----------------SLPVQEMXXXXXXXXXXXXXXXGFEMNLNEALPENNGSFSS 203
                              S+PV  +                  +NLNE L EN    S 
Sbjct: 102 STASNPATLTAFTAIHEPESIPVV-VSSTTDSGAAAVKTEMPAGINLNEGLAENGNFISL 160

Query: 202 LLNGDMHG----GGLFWG 161
           + + D HG    GG  +G
Sbjct: 161 ISSNDQHGFNGLGGYGYG 178


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