BLASTX nr result

ID: Lithospermum22_contig00006551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006551
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]      172   2e-40
dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylv...   169   1e-39
ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-38
emb|CBI15119.3| unnamed protein product [Vitis vinifera]              165   2e-38
ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256...   165   2e-38

>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
          Length = 277

 Score =  172 bits (435), Expect = 2e-40
 Identities = 85/121 (70%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
 Frame = +2

Query: 62  MAFLNRVSGVLRQTTSNRMPVELSASSTSLFQAIRNMSS-KLFIGGLSYGTDEMSLREAF 238
           MAF NRV  +L+Q+ S    +ELSAS+ SLFQAIR+MSS KLF+GGLSYGTDE SL+EAF
Sbjct: 1   MAFFNRVGSILKQSVSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAF 60

Query: 239 SQHGEVVEARIIMDRETGRSRGFGFVTFTSSEEASSAIGALDGQELHGRRIKVNLATERP 418
           SQ+G+V+EAR+IMDR+TGRSRGFGF++F SSEEA+SA+ A+DGQ+LHGRRI+VN ATE+ 
Sbjct: 61  SQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYATEKR 120

Query: 419 R 421
           R
Sbjct: 121 R 121


>dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
           gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich
           protein [Nicotiana tabacum]
          Length = 259

 Score =  169 bits (428), Expect = 1e-39
 Identities = 84/121 (69%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
 Frame = +2

Query: 62  MAFLNRVSGVLRQTTSNRMPVELSASSTSLFQAIRNMSS-KLFIGGLSYGTDEMSLREAF 238
           MAF+N++  +L+Q  S    +EL AS TSL+QAIR+MSS KLF+GGLS+GTDE SL+EAF
Sbjct: 1   MAFVNKIGNMLKQIVSRHANLELCASRTSLYQAIRSMSSSKLFVGGLSWGTDETSLKEAF 60

Query: 239 SQHGEVVEARIIMDRETGRSRGFGFVTFTSSEEASSAIGALDGQELHGRRIKVNLATERP 418
           SQHGEV+EAR+IMDR+TGRSRGFGFV+FTS+EEA+SA+ ALDGQ+LHGR+I+VN ATE+ 
Sbjct: 61  SQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEKL 120

Query: 419 R 421
           R
Sbjct: 121 R 121


>ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|222859243|gb|EEE96790.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  166 bits (419), Expect = 1e-38
 Identities = 84/121 (69%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
 Frame = +2

Query: 62  MAFLNRVSGVLRQTTSNRMPVELSASSTSLFQAIRNMSS-KLFIGGLSYGTDEMSLREAF 238
           MAFL ++  +LRQT S +M  E+SAS  S++QA+R MSS KLF+GG+S+ TD+ SL+EAF
Sbjct: 1   MAFLTKMGNMLRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAF 60

Query: 239 SQHGEVVEARIIMDRETGRSRGFGFVTFTSSEEASSAIGALDGQELHGRRIKVNLATERP 418
            ++G VVEARIIMDRETGRSRGFGFVT+TSSEEASSAI ALDGQ+LHGRR++VN ATERP
Sbjct: 61  DKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATERP 120

Query: 419 R 421
           +
Sbjct: 121 Q 121


>emb|CBI15119.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  165 bits (418), Expect = 2e-38
 Identities = 84/121 (69%), Positives = 102/121 (84%), Gaps = 1/121 (0%)
 Frame = +2

Query: 62  MAFLNRVSGVLRQTTSNRMPVELSASSTSLFQAIRNMSS-KLFIGGLSYGTDEMSLREAF 238
           MAF  +V  +LRQT S ++  + S S+ S++QAIR MSS KLFIGGLSY TD+ SLREAF
Sbjct: 1   MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 239 SQHGEVVEARIIMDRETGRSRGFGFVTFTSSEEASSAIGALDGQELHGRRIKVNLATERP 418
            ++GEV+EAR+I+DRETGRSRGFGFVTFTSSEEASSAI ALDGQ+LHGRR++VN AT+R 
Sbjct: 61  HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120

Query: 419 R 421
           R
Sbjct: 121 R 121


>ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
          Length = 277

 Score =  165 bits (418), Expect = 2e-38
 Identities = 84/121 (69%), Positives = 102/121 (84%), Gaps = 1/121 (0%)
 Frame = +2

Query: 62  MAFLNRVSGVLRQTTSNRMPVELSASSTSLFQAIRNMSS-KLFIGGLSYGTDEMSLREAF 238
           MAF  +V  +LRQT S ++  + S S+ S++QAIR MSS KLFIGGLSY TD+ SLREAF
Sbjct: 1   MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 239 SQHGEVVEARIIMDRETGRSRGFGFVTFTSSEEASSAIGALDGQELHGRRIKVNLATERP 418
            ++GEV+EAR+I+DRETGRSRGFGFVTFTSSEEASSAI ALDGQ+LHGRR++VN AT+R 
Sbjct: 61  HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120

Query: 419 R 421
           R
Sbjct: 121 R 121


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