BLASTX nr result

ID: Lithospermum22_contig00006536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006536
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152624.1| PREDICTED: cytochrome c oxidase subunit 6b-1...    85   5e-15
ref|XP_002513958.1| cytochrome C oxidase polypeptide vib, putati...    82   3e-14
gb|AFK42242.1| unknown [Lotus japonicus]                               76   3e-12
ref|XP_003544809.1| PREDICTED: cytochrome c oxidase subunit 6b-1...    75   4e-12
gb|ABK95863.1| unknown [Populus trichocarpa]                           75   7e-12

>ref|XP_004152624.1| PREDICTED: cytochrome c oxidase subunit 6b-1-like [Cucumis sativus]
           gi|449503913|ref|XP_004162224.1| PREDICTED: cytochrome c
           oxidase subunit 6b-1-like [Cucumis sativus]
          Length = 195

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 55/139 (39%), Positives = 74/139 (53%), Gaps = 33/139 (23%)
 Frame = -1

Query: 319 MAAADTPVTPSLSQEYLLPENDEKLDV----SAKPVDESPTNAAA-----SNEPSVQEIG 167
           MA A +  TPSLS++Y L E +EK+D+      K V+ S   A A     ++EP V+ + 
Sbjct: 1   MAEAQSQQTPSLSEQYSLKEKEEKVDIPQPSEVKEVENSENAAPAEVVVKNDEPPVEAVA 60

Query: 166 EK-----PIVESS-------------------DAPANDSPNEVAATEETSGDQDPTDETP 59
           ++     P  ES+                   D+ A +  +  A  EE SGDQ+ TDE P
Sbjct: 61  DQSSDIPPAEESNGDSSAAAVEDSETSPAAENDSGAAEEESSGAGEEENSGDQESTDERP 120

Query: 58  EVKLETAPADFRFPTTNQT 2
           E+KLETAP DFRFPTTNQT
Sbjct: 121 EIKLETAPVDFRFPTTNQT 139


>ref|XP_002513958.1| cytochrome C oxidase polypeptide vib, putative [Ricinus communis]
           gi|223547044|gb|EEF48541.1| cytochrome C oxidase
           polypeptide vib, putative [Ricinus communis]
          Length = 191

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 56/136 (41%), Positives = 71/136 (52%), Gaps = 33/136 (24%)
 Frame = -1

Query: 310 ADTPV-TPSLSQEYLLPENDEKLDVSAKPVD---------------------ESPTNAAA 197
           ADT   TPSLS++YLL + +EK DV  KPV+                     E P  AAA
Sbjct: 2   ADTTAGTPSLSEQYLLKDKEEKPDVGPKPVEVKEDVKPETIVSVDAAVVKAEEEP--AAA 59

Query: 196 SNEPSVQEIG---------EKPIVESS--DAPANDSPNEVAATEETSGDQDPTDETPEVK 50
           + E +    G           P  ESS  D PA D+ +     E+ S +Q+  +ETP++K
Sbjct: 60  AEEKAEDTAGGGATEESTITNPAAESSSEDTPAVDTESSETTEEQNSTEQEAAEETPKIK 119

Query: 49  LETAPADFRFPTTNQT 2
           LETAPADFRFPTTNQT
Sbjct: 120 LETAPADFRFPTTNQT 135


>gb|AFK42242.1| unknown [Lotus japonicus]
          Length = 177

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 15/121 (12%)
 Frame = -1

Query: 319 MAAADTPVTPSLSQEYLLPENDEKLDVSAKPVD----ESPTNAAASN---EPSVQE---I 170
           MA      +P+L+++Y + +  E+  V  KPV+    E+P   A      E +V+E   +
Sbjct: 1   MAEPAVENSPTLAEQYYVKDKQEEKVVVEKPVEVKEVETPKEVAPEETVVEKTVEETTPV 60

Query: 169 GEKPIVESSDAPANDSPNEVAAT-----EETSGDQDPTDETPEVKLETAPADFRFPTTNQ 5
               + ESS+ P +   +    T     EE SGDQ+  +ETPE+KLETAP DFRFPTTNQ
Sbjct: 61  APAVVEESSEVPPSAEESTEVQTSESVEEENSGDQEAAEETPEIKLETAPVDFRFPTTNQ 120

Query: 4   T 2
           T
Sbjct: 121 T 121


>ref|XP_003544809.1| PREDICTED: cytochrome c oxidase subunit 6b-1-like [Glycine max]
          Length = 175

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
 Frame = -1

Query: 319 MAAADTPVTPSLSQEYLLPENDEKLDVSAKPVD----ESPTNAAASNEPSVQEIGEK--- 161
           MA      + SL++EY +   D++  V  KPV+    E+P  AA S EP  ++  E+   
Sbjct: 1   MAETAVDKSQSLAEEYYV--KDKQTAVVEKPVEVKEVENPEEAA-SEEPVAEKTVEETTP 57

Query: 160 --PIV--ESSDA---PANDSPNEVAA--TEETSGDQDPTDETPEVKLETAPADFRFPTTN 8
             P V  ESS+    PA +S  E ++   EE SG++D  +ETPE+KLETAPADFRFPTTN
Sbjct: 58  VAPAVAQESSEVTPPPAEESTEEQSSGNVEENSGNEDAAEETPEIKLETAPADFRFPTTN 117

Query: 7   QT 2
           QT
Sbjct: 118 QT 119


>gb|ABK95863.1| unknown [Populus trichocarpa]
          Length = 183

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 25/123 (20%)
 Frame = -1

Query: 295 TPSLSQEYLLPENDEKLDVSAKPVD--ESPTNAAASNEPSVQEIGEKPIV---------- 152
           TP+LS+ Y L   +EK DV +KPV+  E    A A +E +V++  E P +          
Sbjct: 5   TPTLSERYELKGKEEKTDVVSKPVEVKEEEKPATAVSEEAVEKAEETPPLAAEEKTEDTP 64

Query: 151 ----ESSDAPAND---SPNEVAATEETS------GDQDPTDETPEVKLETAPADFRFPTT 11
               ES++AP  D   S +  AA EETS        ++  +E  E+KLETAPAD+RFPTT
Sbjct: 65  AAAEESTEAPTTDESSSEDAPAAAEETSEGTEENSGEEAAEEKKEIKLETAPADYRFPTT 124

Query: 10  NQT 2
           NQT
Sbjct: 125 NQT 127


Top