BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005970
         (3314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|2...   471   e-130
ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi...   467   e-128
ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi...   465   e-128
ref|XP_003606459.1| Pentatricopeptide repeat-containing protein ...   438   e-120
ref|NP_180348.2| pentatricopeptide repeat-containing protein [Ar...   421   e-115

>ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|222865910|gb|EEF03041.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  471 bits (1213), Expect = e-130
 Identities = 241/388 (62%), Positives = 288/388 (74%)
 Frame = -1

Query: 1169 SIISHHLNKKCDNSYNLALTQMTISAKNANFKTFLQRWYSSYVVRRPIGPPSXXXXXXXX 990
            S+IS +LN       ++ L   T    ++NF TF    YS+         PS        
Sbjct: 49   SVISSYLNPTARKLKDVDLLAQTQILPSSNFSTF----YSTKA-------PSRSFRKRNN 97

Query: 989  XRFIAATKPVLDESQFERAVSKLPPRFSPEELHNVMVLEDDPLVCLELFNWASKQHRFRH 810
             R  A ++P+LDE++F+R+VS+LP RF+ EEL N + LEDDPLVCLELFNWAS+QHRFRH
Sbjct: 98   KRAKANSRPILDEAKFQRSVSQLPSRFTNEELCNNITLEDDPLVCLELFNWASQQHRFRH 157

Query: 809  NELTYHVTIKKLGAAQMYQEMDDVVNQVLGVPSMGSEVLYNSMIYYFTEARKLTRAVIIF 630
            +  TYHVTIKKLG A+MYQEMDDVVNQ+L VP +G+E LYNS+IYYFTEARKLTRAV IF
Sbjct: 158  DASTYHVTIKKLGIAKMYQEMDDVVNQLLAVPHIGNEALYNSIIYYFTEARKLTRAVNIF 217

Query: 629  KHMKDNKKLSCRPTIRTYNILFAALLSRGKNSYVNHMYMETIRCLFKQMVDDGIEPDIFS 450
            K MK ++ L CRP+I+TYNIL  A+LSRG+NSY+NHMYMET+RCLFKQMVDDG+EPDIFS
Sbjct: 218  KRMKSSRNLDCRPSIKTYNILLTAMLSRGRNSYINHMYMETMRCLFKQMVDDGVEPDIFS 277

Query: 449  LNSMIKGYVLSLHVNDALRIFHQMGVVYECPPNSFSYDYLIHGLCAQGRTKNARELCIQM 270
            LNSMIKGY LSLHVNDALR+FHQMGVVY+C PNSFSYDYL+HGLCAQGRT NAREL  +M
Sbjct: 278  LNSMIKGYALSLHVNDALRVFHQMGVVYKCLPNSFSYDYLVHGLCAQGRTNNARELFDEM 337

Query: 269  KNKGFVPSSKSYNSXXXXXXXXXXXXXXVKYLWEMSDNKRLADFITYRTVIDELCRQRSV 90
            K KGFV S+KS+NS              V YLWEM D  R  D ITY+TV+DE+CRQ  +
Sbjct: 338  KEKGFVLSNKSFNSLVNALALGGEVGEAVNYLWEMIDKHRSVDLITYKTVLDEICRQGRI 397

Query: 89   REARCLLEDLQNKGLIDELTYRRLLDEL 6
             EA  LL++ Q K L+D +TYR LL  L
Sbjct: 398  GEATSLLKEWQEKDLVDGITYRELLHVL 425


>ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
            mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  467 bits (1201), Expect = e-128
 Identities = 237/362 (65%), Positives = 277/362 (76%), Gaps = 1/362 (0%)
 Frame = -1

Query: 1097 SAKNANFKTFLQRWYSSYVVRRPIGPPSXXXXXXXXXRFIAATKPVLDESQFERAVSKLP 918
            S  N +F  FL ++YS          PS         R  ++ KP LDE+QF+ AVSK+P
Sbjct: 63   SGPNLSFTNFLLKFYSR-------AAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIP 115

Query: 917  PRFSPEELHNVMVLEDDPLVCLELFNWASKQHRFRHNELTYHVTIKKLGAAQMYQEMDDV 738
            PRF+ EEL NV+ L+ DPLVC ELFNWAS+Q RFRH++ +Y +TIKKLG A+MY+EMD V
Sbjct: 116  PRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHV 175

Query: 737  VNQVLGVPSMGSEVLYNSMIYYFTEARKLTRAVIIFKHMKDNKKLSCRPTIRTYNILFAA 558
            VNQ L V S+GSE LYN+MIY+FTEARKLTRAV IFKHM++N+ L+CRP+IRTYN+LF A
Sbjct: 176  VNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTA 235

Query: 557  LLSRGKNSYVNHMYMETIRCLFKQMV-DDGIEPDIFSLNSMIKGYVLSLHVNDALRIFHQ 381
             LSRG+N+Y+NHMYMETIRCLF+QMV DDGIEPDIFSLN MIKGYVLSLHVNDALRIFHQ
Sbjct: 236  FLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQ 295

Query: 380  MGVVYECPPNSFSYDYLIHGLCAQGRTKNARELCIQMKNKGFVPSSKSYNSXXXXXXXXX 201
            MGVVY C PNS+SYDYLIHGLCAQ RT NA+ELC +MK KGFVPSS SYNS         
Sbjct: 296  MGVVYSCLPNSYSYDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNG 355

Query: 200  XXXXXVKYLWEMSDNKRLADFITYRTVIDELCRQRSVREARCLLEDLQNKGLIDELTYRR 21
                 V YLWEM DN+R  DFITY+TV+DELCRQ  V EA  LL +LQ K L+D  TYR+
Sbjct: 356  EVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRK 415

Query: 20   LL 15
            LL
Sbjct: 416  LL 417


>ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
            mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  465 bits (1197), Expect = e-128
 Identities = 236/362 (65%), Positives = 277/362 (76%), Gaps = 1/362 (0%)
 Frame = -1

Query: 1097 SAKNANFKTFLQRWYSSYVVRRPIGPPSXXXXXXXXXRFIAATKPVLDESQFERAVSKLP 918
            S  N +F  FL ++YS          PS         R  ++ KP LDE+QF+ AVSK+P
Sbjct: 63   SGPNLSFTNFLLKFYSR-------AAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIP 115

Query: 917  PRFSPEELHNVMVLEDDPLVCLELFNWASKQHRFRHNELTYHVTIKKLGAAQMYQEMDDV 738
            PRF+ EEL NV+ L+ DPLVC ELFNWAS+Q RFRH++ +Y +TIKKLG A+MY+EMD V
Sbjct: 116  PRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHV 175

Query: 737  VNQVLGVPSMGSEVLYNSMIYYFTEARKLTRAVIIFKHMKDNKKLSCRPTIRTYNILFAA 558
            VNQ L V S+GSE LYN+MIY+FTEARKLTRAV IFKHM++N+ L+CRP+IRTYN+LF A
Sbjct: 176  VNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTA 235

Query: 557  LLSRGKNSYVNHMYMETIRCLFKQMV-DDGIEPDIFSLNSMIKGYVLSLHVNDALRIFHQ 381
             LSRG+N+Y+NHMYMETIRCLF+QMV DDGIEPDIFSLN MIKGYVLSLHVNDALRIFHQ
Sbjct: 236  FLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQ 295

Query: 380  MGVVYECPPNSFSYDYLIHGLCAQGRTKNARELCIQMKNKGFVPSSKSYNSXXXXXXXXX 201
            MGVVY C PNS+S+DYLIHGLCAQ RT NA+ELC +MK KGFVPSS SYNS         
Sbjct: 296  MGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNG 355

Query: 200  XXXXXVKYLWEMSDNKRLADFITYRTVIDELCRQRSVREARCLLEDLQNKGLIDELTYRR 21
                 V YLWEM DN+R  DFITY+TV+DELCRQ  V EA  LL +LQ K L+D  TYR+
Sbjct: 356  EVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRK 415

Query: 20   LL 15
            LL
Sbjct: 416  LL 417


>ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355507514|gb|AES88656.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  438 bits (1126), Expect = e-120
 Identities = 220/337 (65%), Positives = 265/337 (78%), Gaps = 2/337 (0%)
 Frame = -1

Query: 1019 PSXXXXXXXXXRFIAATKPVLDESQFERAVSKLPPRFSPEELHNVMVLEDDPLVCLELFN 840
            PS         RF+ A KPVLD+ +F+ A S+L PRF+PEEL NV+  + DPLVCLELF+
Sbjct: 59   PSRSYRRRARNRFLKANKPVLDQEKFQFAQSQLLPRFTPEELRNVIANQRDPLVCLELFH 118

Query: 839  WASKQHRFRHNELTYHVTIKKLGAAQMYQEMDDVVNQVLGVPSMGSEVLYNSMIYYFTEA 660
            WAS Q RFRHNE ++HVTIKKLG A+MYQEMDDVVNQ+L V S+G+E L+N +IYYFTEA
Sbjct: 119  WASHQPRFRHNESSFHVTIKKLGDAKMYQEMDDVVNQLLAVRSIGNEALFNMIIYYFTEA 178

Query: 659  RKLTRAVIIFKHMK--DNKKLSCRPTIRTYNILFAALLSRGKNSYVNHMYMETIRCLFKQ 486
            RKLTRAVI+FKHMK   N     RP+IRTYNILF A LSRG N+++N +YMET+RCLF+Q
Sbjct: 179  RKLTRAVIVFKHMKCSRNPNFGFRPSIRTYNILFGAFLSRGYNTHINLVYMETMRCLFRQ 238

Query: 485  MVDDGIEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYECPPNSFSYDYLIHGLCAQG 306
            MV++ IEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVY+C PNS +YDYLIHGLCA+G
Sbjct: 239  MVNEHIEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYDCKPNSLTYDYLIHGLCAKG 298

Query: 305  RTKNARELCIQMKNKGFVPSSKSYNSXXXXXXXXXXXXXXVKYLWEMSDNKRLADFITYR 126
            RT+NA+EL  +MK KGFVPSSKSYNS              V YLWEM++ ++  DFITYR
Sbjct: 299  RTENAKELYHEMKAKGFVPSSKSYNSLVNSLALVGDVEEAVNYLWEMTEKQKSVDFITYR 358

Query: 125  TVIDELCRQRSVREARCLLEDLQNKGLIDELTYRRLL 15
            TV+DE+CR+  V+EA   L++LQ K L+D  TYR+LL
Sbjct: 359  TVLDEICRRGRVQEAMRFLQELQEKDLVDGHTYRKLL 395


>ref|NP_180348.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|218546772|sp|Q9ZUY1.2|PP173_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g27800, mitochondrial; Flags: Precursor
            gi|330252952|gb|AEC08046.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 442

 Score =  421 bits (1082), Expect = e-115
 Identities = 202/324 (62%), Positives = 251/324 (77%)
 Frame = -1

Query: 977  AATKPVLDESQFERAVSKLPPRFSPEELHNVMVLEDDPLVCLELFNWASKQHRFRHNELT 798
            ++ KP+L+ S+F   +SKLPPRF+PEEL + + LE+DP +C  LFNWAS+Q RF H   +
Sbjct: 115  SSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCS 174

Query: 797  YHVTIKKLGAAQMYQEMDDVVNQVLGVPSMGSEVLYNSMIYYFTEARKLTRAVIIFKHMK 618
            YH+ I+KLGAA+MYQEMDD+VNQVL V  +G+E LYNS+I+YFT+A KL RAV IF+HM 
Sbjct: 175  YHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMV 234

Query: 617  DNKKLSCRPTIRTYNILFAALLSRGKNSYVNHMYMETIRCLFKQMVDDGIEPDIFSLNSM 438
             +K L CRPTIRTY+ILF ALL RG NSY+NH+YMET+R LF+QMVD GIEPD+F+LN +
Sbjct: 235  TSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCL 294

Query: 437  IKGYVLSLHVNDALRIFHQMGVVYECPPNSFSYDYLIHGLCAQGRTKNARELCIQMKNKG 258
            +KGYVLSLHVNDALRIFHQM VVY+C PNSF+YDYLIHGLCAQGRT NAREL  +MK KG
Sbjct: 295  VKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKG 354

Query: 257  FVPSSKSYNSXXXXXXXXXXXXXXVKYLWEMSDNKRLADFITYRTVIDELCRQRSVREAR 78
            FVP+ KSYNS              VK LWEM +N R+ DFI+YRT++DE CR+    EA 
Sbjct: 355  FVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEAT 414

Query: 77   CLLEDLQNKGLIDELTYRRLLDEL 6
             LLE L+ K L+D  +Y +L++ L
Sbjct: 415  RLLEMLREKQLVDRDSYDKLVNVL 438