BLASTX nr result

ID: Lithospermum22_contig00005930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005930
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36004.1| unknown [Lotus japonicus]                              212   8e-53
ref|XP_002309600.1| histone 2 [Populus trichocarpa] gi|224092420...   211   1e-52
gb|AFK48552.1| unknown [Medicago truncatula]                          211   1e-52
ref|XP_003588715.1| Histone H2A [Medicago truncatula] gi|3554777...   211   1e-52
ref|NP_191019.1| histone H2A [Arabidopsis thaliana] gi|297816752...   210   2e-52

>gb|AFK36004.1| unknown [Lotus japonicus]
          Length = 133

 Score =  212 bits (539), Expect = 8e-53
 Identities = 108/115 (93%), Positives = 112/115 (97%)
 Frame = -3

Query: 625 DKQKKMPTSRSSRAGLQFPVGRIHRHLKTRTSAHGRVGATAAVYTAAILEYLTAEVLELA 446
           DK KK PTSRSSRAGLQFPVGRIHR LK+RT+AHGRVGATAAVY+AAILEYLTAEVLELA
Sbjct: 19  DKDKKKPTSRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELA 78

Query: 445 GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 281
           GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK+SKE
Sbjct: 79  GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 133


>ref|XP_002309600.1| histone 2 [Populus trichocarpa] gi|224092420|ref|XP_002309601.1|
           histone 2 [Populus trichocarpa]
           gi|118488791|gb|ABK96206.1| unknown [Populus
           trichocarpa] gi|222855576|gb|EEE93123.1| histone 2
           [Populus trichocarpa] gi|222855577|gb|EEE93124.1|
           histone 2 [Populus trichocarpa]
          Length = 134

 Score =  211 bits (538), Expect = 1e-52
 Identities = 108/115 (93%), Positives = 111/115 (96%)
 Frame = -3

Query: 625 DKQKKMPTSRSSRAGLQFPVGRIHRHLKTRTSAHGRVGATAAVYTAAILEYLTAEVLELA 446
           DK KK PTSRSSRAGLQFPVGRIHR LKTR +AHGRVGATAAVY+AAILEYLTAEVLELA
Sbjct: 20  DKDKKKPTSRSSRAGLQFPVGRIHRLLKTRATAHGRVGATAAVYSAAILEYLTAEVLELA 79

Query: 445 GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 281
           GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK+SKE
Sbjct: 80  GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134


>gb|AFK48552.1| unknown [Medicago truncatula]
          Length = 134

 Score =  211 bits (537), Expect = 1e-52
 Identities = 108/115 (93%), Positives = 111/115 (96%)
 Frame = -3

Query: 625 DKQKKMPTSRSSRAGLQFPVGRIHRHLKTRTSAHGRVGATAAVYTAAILEYLTAEVLELA 446
           DK KK PTSRSSRAGLQFPVGRIHR LK+RT AHGRVGATAAVY+AAILEYLTAEVLELA
Sbjct: 20  DKDKKKPTSRSSRAGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELA 79

Query: 445 GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 281
           GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK+SKE
Sbjct: 80  GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134


>ref|XP_003588715.1| Histone H2A [Medicago truncatula] gi|355477763|gb|AES58966.1|
           Histone H2A [Medicago truncatula]
          Length = 345

 Score =  211 bits (537), Expect = 1e-52
 Identities = 108/115 (93%), Positives = 111/115 (96%)
 Frame = -3

Query: 625 DKQKKMPTSRSSRAGLQFPVGRIHRHLKTRTSAHGRVGATAAVYTAAILEYLTAEVLELA 446
           DK KK PTSRSSRAGLQFPVGRIHR LK+RT AHGRVGATAAVY+AAILEYLTAEVLELA
Sbjct: 231 DKDKKKPTSRSSRAGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELA 290

Query: 445 GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 281
           GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK+SKE
Sbjct: 291 GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 345


>ref|NP_191019.1| histone H2A [Arabidopsis thaliana] gi|297816752|ref|XP_002876259.1|
           histone H2A.F/Z [Arabidopsis lyrata subsp. lyrata]
           gi|75277395|sp|O23628.1|H2AV1_ARATH RecName:
           Full=Histone H2A variant 1; AltName: Full=H2A.F/Z 1;
           AltName: Full=H2AvAt; AltName: Full=HTA11
           gi|2407800|emb|CAA73155.1| histone H2A.F/Z [Arabidopsis
           thaliana] gi|7258359|emb|CAB77576.1| histone H2A.F/Z
           [Arabidopsis thaliana] gi|21592838|gb|AAM64788.1|
           histone H2A.F/Z [Arabidopsis thaliana]
           gi|28950691|gb|AAO63269.1| At3g54560 [Arabidopsis
           thaliana] gi|110736078|dbj|BAF00012.1| histone H2A.F/Z
           [Arabidopsis thaliana] gi|297322097|gb|EFH52518.1|
           histone H2A.F/Z [Arabidopsis lyrata subsp. lyrata]
           gi|332645729|gb|AEE79250.1| histone H2A [Arabidopsis
           thaliana]
          Length = 136

 Score =  210 bits (535), Expect = 2e-52
 Identities = 106/115 (92%), Positives = 110/115 (95%)
 Frame = -3

Query: 625 DKQKKMPTSRSSRAGLQFPVGRIHRHLKTRTSAHGRVGATAAVYTAAILEYLTAEVLELA 446
           DK KK P SRS+RAG+QFPVGRIHR LKTR SAHGRVGATAAVYTA+ILEYLTAEVLELA
Sbjct: 22  DKDKKKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELA 81

Query: 445 GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 281
           GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKT+KE
Sbjct: 82  GNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 136


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