BLASTX nr result

ID: Lithospermum22_contig00005888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005888
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531587.1| Cofactor required for Sp1 transcriptional ac...   208   1e-51
ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|2...   203   4e-50
ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II tra...   200   4e-49
ref|XP_004170343.1| PREDICTED: mediator of RNA polymerase II tra...   198   1e-48
ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra...   198   1e-48

>ref|XP_002531587.1| Cofactor required for Sp1 transcriptional activation subunit,
           putative [Ricinus communis] gi|223528783|gb|EEF30790.1|
           Cofactor required for Sp1 transcriptional activation
           subunit, putative [Ricinus communis]
          Length = 168

 Score =  208 bits (530), Expect = 1e-51
 Identities = 105/122 (86%), Positives = 114/122 (93%)
 Frame = +2

Query: 173 EEVLPSLEDQGVRPLYQTTPNLDFKKELSSLNRELQLNILELSDIIIERPHQYGRRVEEI 352
           E VLPSLE+QGVR LY   PN+DFKKEL SLNRELQL+ILELSD+++ERP QY RRVE+I
Sbjct: 47  EYVLPSLEEQGVRQLYPKGPNVDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDI 106

Query: 353 SLLFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKESLGTLD 532
           SL+FKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKE+LGTLD
Sbjct: 107 SLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKEALGTLD 166

Query: 533 GQ 538
           GQ
Sbjct: 167 GQ 168


>ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|222867982|gb|EEF05113.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  203 bits (516), Expect = 4e-50
 Identities = 101/122 (82%), Positives = 114/122 (93%)
 Frame = +2

Query: 173 EEVLPSLEDQGVRPLYQTTPNLDFKKELSSLNRELQLNILELSDIIIERPHQYGRRVEEI 352
           ++VLPSLE+QGVR LY   PN+DFKKEL SLNRELQL+ILEL+D+++ERP QY RRVE+I
Sbjct: 47  DDVLPSLEEQGVRQLYPKGPNVDFKKELRSLNRELQLHILELADVLVERPSQYARRVEDI 106

Query: 353 SLLFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKESLGTLD 532
           SL+FKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKR+REEAQKLLKE+LGTL 
Sbjct: 107 SLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRQREEAQKLLKEALGTLA 166

Query: 533 GQ 538
           GQ
Sbjct: 167 GQ 168


>ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7
           [Vitis vinifera] gi|297739781|emb|CBI29963.3| unnamed
           protein product [Vitis vinifera]
          Length = 168

 Score =  200 bits (508), Expect = 4e-49
 Identities = 98/122 (80%), Positives = 114/122 (93%)
 Frame = +2

Query: 173 EEVLPSLEDQGVRPLYQTTPNLDFKKELSSLNRELQLNILELSDIIIERPHQYGRRVEEI 352
           ++VLPSLE+QGVR LY    N+DFKKEL SLNRELQL++LEL+D+++ERP QY RRVE+I
Sbjct: 47  DDVLPSLEEQGVRQLYPKGSNVDFKKELRSLNRELQLHLLELADVLVERPSQYARRVEDI 106

Query: 353 SLLFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKESLGTLD 532
           SL+FKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ+LLKE++GTL+
Sbjct: 107 SLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRLLKEAVGTLE 166

Query: 533 GQ 538
           GQ
Sbjct: 167 GQ 168


>ref|XP_004170343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like, partial [Cucumis sativus]
          Length = 123

 Score =  198 bits (504), Expect = 1e-48
 Identities = 99/121 (81%), Positives = 112/121 (92%)
 Frame = +2

Query: 173 EEVLPSLEDQGVRPLYQTTPNLDFKKELSSLNRELQLNILELSDIIIERPHQYGRRVEEI 352
           ++VLPSLE+QGVR LY   PN+D+KKEL SLNRELQL+ILEL+DI++ERP QY RRVEEI
Sbjct: 2   DDVLPSLEEQGVRQLYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEI 61

Query: 353 SLLFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKESLGTLD 532
           SL+FKNLHHLLNSLRPHQARATLIHILELQI+RR+QAVEDIKRRREEAQ+LL ESL TLD
Sbjct: 62  SLIFKNLHHLLNSLRPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLD 121

Query: 533 G 535
           G
Sbjct: 122 G 122


>ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Cucumis sativus]
          Length = 168

 Score =  198 bits (504), Expect = 1e-48
 Identities = 99/121 (81%), Positives = 112/121 (92%)
 Frame = +2

Query: 173 EEVLPSLEDQGVRPLYQTTPNLDFKKELSSLNRELQLNILELSDIIIERPHQYGRRVEEI 352
           ++VLPSLE+QGVR LY   PN+D+KKEL SLNRELQL+ILEL+DI++ERP QY RRVEEI
Sbjct: 47  DDVLPSLEEQGVRQLYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEI 106

Query: 353 SLLFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKESLGTLD 532
           SL+FKNLHHLLNSLRPHQARATLIHILELQI+RR+QAVEDIKRRREEAQ+LL ESL TLD
Sbjct: 107 SLIFKNLHHLLNSLRPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLD 166

Query: 533 G 535
           G
Sbjct: 167 G 167


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