BLASTX nr result

ID: Lithospermum22_contig00005814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005814
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   353   2e-95
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   353   2e-95
gb|AFK47538.1| unknown [Medicago truncatula]                          350   2e-94
emb|CBI36012.3| unnamed protein product [Vitis vinifera]              349   4e-94
ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|2...   347   2e-93

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  353 bits (907), Expect = 2e-95
 Identities = 175/227 (77%), Positives = 194/227 (85%), Gaps = 2/227 (0%)
 Frame = +1

Query: 157 TDMSGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNENIRMQSIHPLDHSHLDKMT 336
           TDM+GICFRDQLWLN+YPLDRNLVFDYFALSPFYDWTCNNE +R++SIHPLD SHL KMT
Sbjct: 31  TDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMT 90

Query: 337 GVEYVVSDVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLSNVFSARIGRALY 516
           G EY++++VMEPHLFVIRKQKRD PEKVTPMLTYY+LDGSIYQAPQL NVF+ARIGRALY
Sbjct: 91  GTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALY 150

Query: 517 YISKAFTTASSNLEKIGYVDAENESAASEPKATKETIDFKELKRVDHILASLQRKXXXXX 696
           +ISKAFTTA+S LEKIGYVDAENE+ A E K  KETIDFKE+ RVD ILASLQRK     
Sbjct: 151 HISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAP 210

Query: 697 XXXXXXEGYMPPTTAEGENGTENQE-AELQ-PSVDPIIDQGPSKRIK 831
                 EGY PP TAEGE G E Q+ AE Q P++DPIIDQGPSKR+K
Sbjct: 211 PPPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMK 257


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  353 bits (907), Expect = 2e-95
 Identities = 175/227 (77%), Positives = 194/227 (85%), Gaps = 2/227 (0%)
 Frame = +1

Query: 157 TDMSGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNENIRMQSIHPLDHSHLDKMT 336
           TDM+GICFRDQLWLN+YPLDRNLVFDYFALSPFYDWTCNNE +R++SIHPLD SHL KMT
Sbjct: 26  TDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMT 85

Query: 337 GVEYVVSDVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLSNVFSARIGRALY 516
           G EY++++VMEPHLFVIRKQKRD PEKVTPMLTYY+LDGSIYQAPQL NVF+ARIGRALY
Sbjct: 86  GTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALY 145

Query: 517 YISKAFTTASSNLEKIGYVDAENESAASEPKATKETIDFKELKRVDHILASLQRKXXXXX 696
           +ISKAFTTA+S LEKIGYVDAENE+ A E K  KETIDFKE+ RVD ILASLQRK     
Sbjct: 146 HISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAP 205

Query: 697 XXXXXXEGYMPPTTAEGENGTENQE-AELQ-PSVDPIIDQGPSKRIK 831
                 EGY PP TAEGE G E Q+ AE Q P++DPIIDQGPSKR+K
Sbjct: 206 PAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMK 252


>gb|AFK47538.1| unknown [Medicago truncatula]
          Length = 248

 Score =  350 bits (899), Expect = 2e-94
 Identities = 169/227 (74%), Positives = 192/227 (84%), Gaps = 2/227 (0%)
 Frame = +1

Query: 157 TDMSGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNENIRMQSIHPLDHSHLDKMT 336
           TDM+GICFRDQLWLNTYPLDR+LVFDYFALSPFYDWT NNE +RM+S HPLD S L KM 
Sbjct: 21  TDMTGICFRDQLWLNTYPLDRDLVFDYFALSPFYDWTSNNEQLRMRSHHPLDSSQLTKMI 80

Query: 337 GVEYVVSDVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLSNVFSARIGRALY 516
           G+EYV+S+VMEPHLF+++KQKRDSP+KVTPML YY+LDGSIYQAPQLSNVF+ARIGRALY
Sbjct: 81  GIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGSIYQAPQLSNVFAARIGRALY 140

Query: 517 YISKAFTTASSNLEKIGYVDAENESAASEPKATKETIDFKELKRVDHILASLQRKXXXXX 696
           YI KAFTTA+S LEKIGYVD+ENE+   EPK  KETID KE+KRVDHILASLQRK     
Sbjct: 141 YIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKETIDLKEIKRVDHILASLQRKLPPAP 200

Query: 697 XXXXXXEGYMPPTTAEGENGTENQEA--ELQPSVDPIIDQGPSKRIK 831
                 EGY+PP+TAE E G E QEA   L P+VDPI+DQGP+KR+K
Sbjct: 201 PPPPFPEGYVPPSTAETEKGPETQEAAESLAPTVDPILDQGPAKRMK 247


>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  349 bits (896), Expect = 4e-94
 Identities = 173/225 (76%), Positives = 192/225 (85%), Gaps = 2/225 (0%)
 Frame = +1

Query: 163 MSGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNENIRMQSIHPLDHSHLDKMTGV 342
           M+GICFRDQLWLN+YPLDRNLVFDYFALSPFYDWTCNNE +R++SIHPLD SHL KMTG 
Sbjct: 1   MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60

Query: 343 EYVVSDVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLSNVFSARIGRALYYI 522
           EY++++VMEPHLFVIRKQKRD PEKVTPMLTYY+LDGSIYQAPQL NVF+ARIGRALY+I
Sbjct: 61  EYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHI 120

Query: 523 SKAFTTASSNLEKIGYVDAENESAASEPKATKETIDFKELKRVDHILASLQRKXXXXXXX 702
           SKAFTTA+S LEKIGYVDAENE+ A E K  KETIDFKE+ RVD ILASLQRK       
Sbjct: 121 SKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPP 180

Query: 703 XXXXEGYMPPTTAEGENGTENQE-AELQ-PSVDPIIDQGPSKRIK 831
               EGY PP TAEGE G E Q+ AE Q P++DPIIDQGPSKR+K
Sbjct: 181 PQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMK 225


>ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|222874599|gb|EEF11730.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  347 bits (891), Expect = 2e-93
 Identities = 174/227 (76%), Positives = 190/227 (83%), Gaps = 2/227 (0%)
 Frame = +1

Query: 157 TDMSGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNENIRMQSIHPLDHSHLDKMT 336
           TDM+GICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNE +R QSIHPLD SHL KMT
Sbjct: 8   TDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLKMT 67

Query: 337 GVEYVVSDVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLSNVFSARIGRALY 516
           G EY++S+VMEPHLFV RKQKRDS EKVTPMLTYYVLDGSIYQAPQL +VF+AR+GRALY
Sbjct: 68  GTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAARVGRALY 127

Query: 517 YISKAFTTASSNLEKIGYVDAENESAASEPKATKETIDFKELKRVDHILASLQRKXXXXX 696
           YISKAF TA+S LEKIGYVD+ENE AASE K  KE IDFKE+KR+DHILASLQRK     
Sbjct: 128 YISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKLPPAP 187

Query: 697 XXXXXXEGYMPPTTAEGENGTENQE-AELQ-PSVDPIIDQGPSKRIK 831
                 EGY+P  T E E G E Q+  E Q PSVDPIIDQGP+KR+K
Sbjct: 188 PPPSFPEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMK 234


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