BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005688
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40126.1| unknown [Medicago truncatula]                          591   e-166
ref|XP_002509739.1| replication factor C / DNA polymerase III ga...   591   e-166
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li...   587   e-165
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V...   584   e-164
ref|XP_002304476.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164

>gb|AFK40126.1| unknown [Medicago truncatula]
          Length = 333

 Score =  591 bits (1524), Expect = e-166
 Identities = 289/330 (87%), Positives = 314/330 (95%)
 Frame = -2

Query: 1268 AGSSSSIVLPDIPWVEKFRPSKVSDIVGNRDAVARLQVISRDGNMPNLILAGPPGTGKTT 1089
            + SSS+    D+PWVEK+RPSKV DIVGN DAV+RLQVI+RDGNMPNLIL+GPPGTGKTT
Sbjct: 4    SSSSSNTASYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 63

Query: 1088 SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPAGRHKIIILDEAD 909
            SILALAHELLGPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLP GRHK++ILDEAD
Sbjct: 64   SILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 123

Query: 908  SMTSGAQQALRRTMEIYSSSTRFALACNTSSKVIEPIQSRCALVRFTRLSDEEILGRLMV 729
            SMTSGAQQALRRTMEIYS+STRFALACNTSSK+IEPIQSRCA+VRF+RLSD+EILGRLMV
Sbjct: 124  SMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMV 183

Query: 728  VVDAEKVPYIPEGLEAIIFTADGDMRQALNNLQATVSGFGFVNQENVFKVCDQPHPLHVK 549
            VV AEKVPY+PEGLEAIIFTADGDMRQ LNNLQAT SGF FVNQ NVFKVCDQPHPLHVK
Sbjct: 184  VVQAEKVPYVPEGLEAIIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLHVK 243

Query: 548  NMIRNILEGNFDEACSGLKQLYDLGYSPTDIITTIFRIIKNYEMAEYIKLEFMKETGFAH 369
            NM+RN++EGNFDEACSGLKQLYDLGYSPTDIITT+FRIIK+Y+MAEY+KLEFMKETGFAH
Sbjct: 244  NMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGFAH 303

Query: 368  MRICDGVGSYLQMCGLLAKLAVARETAKAA 279
            MRICDGVGSYLQMCGLLAK A+ R+TA AA
Sbjct: 304  MRICDGVGSYLQMCGLLAKFALVRDTANAA 333


>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223549638|gb|EEF51126.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 333

 Score =  591 bits (1523), Expect = e-166
 Identities = 290/333 (87%), Positives = 318/333 (95%), Gaps = 2/333 (0%)
 Frame = -2

Query: 1271 MAGSSSSIVLP--DIPWVEKFRPSKVSDIVGNRDAVARLQVISRDGNMPNLILAGPPGTG 1098
            MA SSSS      D+PWVEK+RPSK+ DIVGN DAV+RLQVI+RDGNMPNLIL+GPPGTG
Sbjct: 1    MATSSSSSATQNYDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG 60

Query: 1097 KTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPAGRHKIIILD 918
            KTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLP GRHK++ILD
Sbjct: 61   KTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 120

Query: 917  EADSMTSGAQQALRRTMEIYSSSTRFALACNTSSKVIEPIQSRCALVRFTRLSDEEILGR 738
            EADSMTSGAQQALRRTMEIYS+STRFALACNTSSK+IEPIQSRCALVRF+RLSD+EILGR
Sbjct: 121  EADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGR 180

Query: 737  LMVVVDAEKVPYIPEGLEAIIFTADGDMRQALNNLQATVSGFGFVNQENVFKVCDQPHPL 558
            L++VV AEKVPY+PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPL
Sbjct: 181  LIIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPL 240

Query: 557  HVKNMIRNILEGNFDEACSGLKQLYDLGYSPTDIITTIFRIIKNYEMAEYIKLEFMKETG 378
            HVKNM+R+++EG +D+ACSGLKQLYDLGYSPTDIITT+FRIIKNY+MAEY+KLEFMKETG
Sbjct: 241  HVKNMVRHVMEGKYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG 300

Query: 377  FAHMRICDGVGSYLQMCGLLAKLAVARETAKAA 279
            FAHMRICDGVGSYLQ+CGLLAKLA+ R+TA+AA
Sbjct: 301  FAHMRICDGVGSYLQLCGLLAKLALVRDTARAA 333


>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
            gi|449494241|ref|XP_004159490.1| PREDICTED: replication
            factor C subunit 2-like [Cucumis sativus]
          Length = 331

 Score =  587 bits (1512), Expect = e-165
 Identities = 285/330 (86%), Positives = 316/330 (95%)
 Frame = -2

Query: 1271 MAGSSSSIVLPDIPWVEKFRPSKVSDIVGNRDAVARLQVISRDGNMPNLILAGPPGTGKT 1092
            MA SS S    DIPWVEK+RP+KV+DIVGN DAV+RLQVI+RDGNMPNLIL+GPPGTGKT
Sbjct: 1    MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 1091 TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPAGRHKIIILDEA 912
            TSILALAHELLGPNYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLP GRHK++ILDEA
Sbjct: 61   TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120

Query: 911  DSMTSGAQQALRRTMEIYSSSTRFALACNTSSKVIEPIQSRCALVRFTRLSDEEILGRLM 732
            DSMT+GAQQALRRTMEIYS++TRFALACNTSSK+IEPIQSRCA+VRF+RL+D+EILGRLM
Sbjct: 121  DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 731  VVVDAEKVPYIPEGLEAIIFTADGDMRQALNNLQATVSGFGFVNQENVFKVCDQPHPLHV 552
            VV+ AEKVPY+PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQ+NVFKVCDQPHPLHV
Sbjct: 181  VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 551  KNMIRNILEGNFDEACSGLKQLYDLGYSPTDIITTIFRIIKNYEMAEYIKLEFMKETGFA 372
            KN++RN+LEG FD+AC+GL+QLYDLGYSPTDIITT+FRIIKNY+MAEY+KLEFMKETGFA
Sbjct: 241  KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 371  HMRICDGVGSYLQMCGLLAKLAVARETAKA 282
            HMRICDGVGSYLQ+CGLLAKL++ RETAKA
Sbjct: 301  HMRICDGVGSYLQLCGLLAKLSMVRETAKA 330


>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
            gi|297742576|emb|CBI34725.3| unnamed protein product
            [Vitis vinifera]
          Length = 330

 Score =  584 bits (1506), Expect = e-164
 Identities = 286/327 (87%), Positives = 314/327 (96%)
 Frame = -2

Query: 1262 SSSSIVLPDIPWVEKFRPSKVSDIVGNRDAVARLQVISRDGNMPNLILAGPPGTGKTTSI 1083
            SSSS+   D+PWVEK+RP+KV+DIVGN D V+RLQVI+RDGNMPNLIL+GPPGTGKTTS+
Sbjct: 3    SSSSMSNYDMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSV 62

Query: 1082 LALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPAGRHKIIILDEADSM 903
            LALAHELLG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLP+G HKI+ILDEADSM
Sbjct: 63   LALAHELLGANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSM 122

Query: 902  TSGAQQALRRTMEIYSSSTRFALACNTSSKVIEPIQSRCALVRFTRLSDEEILGRLMVVV 723
            T+GAQQALRRTMEIYS+STRFALACN SSK+IEPIQSRCA+VRF+RLSD+EILGRLMVVV
Sbjct: 123  TTGAQQALRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVV 182

Query: 722  DAEKVPYIPEGLEAIIFTADGDMRQALNNLQATVSGFGFVNQENVFKVCDQPHPLHVKNM 543
            +AEKVP++PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNM
Sbjct: 183  EAEKVPFVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNM 242

Query: 542  IRNILEGNFDEACSGLKQLYDLGYSPTDIITTIFRIIKNYEMAEYIKLEFMKETGFAHMR 363
            +RN+LEG FD+AC GLKQLYDLGYSPTDIITT+FRIIKNY+MAEY+KLEFMKETGFAHMR
Sbjct: 243  VRNVLEGKFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMR 302

Query: 362  ICDGVGSYLQMCGLLAKLAVARETAKA 282
            ICDGVGSYLQ+CGLLAKLAV RETAKA
Sbjct: 303  ICDGVGSYLQLCGLLAKLAVVRETAKA 329


>ref|XP_002304476.1| predicted protein [Populus trichocarpa] gi|222841908|gb|EEE79455.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  584 bits (1506), Expect = e-164
 Identities = 290/331 (87%), Positives = 317/331 (95%)
 Frame = -2

Query: 1271 MAGSSSSIVLPDIPWVEKFRPSKVSDIVGNRDAVARLQVISRDGNMPNLILAGPPGTGKT 1092
            MA SS+S    DIPWVEK+RP+KV+DIVGN+DAV+RLQVI+RDGNMPNLILAGPPGTGKT
Sbjct: 1    MASSSNSSNY-DIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKT 59

Query: 1091 TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPAGRHKIIILDEA 912
            TSILALAHELLGPN KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLP G+HKI+ILDEA
Sbjct: 60   TSILALAHELLGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEA 119

Query: 911  DSMTSGAQQALRRTMEIYSSSTRFALACNTSSKVIEPIQSRCALVRFTRLSDEEILGRLM 732
            DSMTSGAQQALRRTMEIYS+STRFALACNTSSK+IEPIQSRCA+VRF+RLSD+EILGRLM
Sbjct: 120  DSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLM 179

Query: 731  VVVDAEKVPYIPEGLEAIIFTADGDMRQALNNLQATVSGFGFVNQENVFKVCDQPHPLHV 552
            VVV AE+VPY+PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHV
Sbjct: 180  VVVGAEQVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHV 239

Query: 551  KNMIRNILEGNFDEACSGLKQLYDLGYSPTDIITTIFRIIKNYEMAEYIKLEFMKETGFA 372
            KNM+R +LEG FD+ACSGLK LYD+GYSPTDIITT+FRIIKNY+MAEY+KLEFMKETGFA
Sbjct: 240  KNMVRQVLEGKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFA 299

Query: 371  HMRICDGVGSYLQMCGLLAKLAVARETAKAA 279
            HMRICDGVGSYLQ+CGLLAKLA+ R+TA+AA
Sbjct: 300  HMRICDGVGSYLQLCGLLAKLALVRDTARAA 330