BLASTX nr result

ID: Lithospermum22_contig00005685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005685
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2V9B0.1|MY1R1_SOLTU RecName: Full=Transcription factor MYB1R...    79   7e-20
gb|AAX95766.1| Putative DNA binding protein, identical [Solanum ...    77   2e-19
gb|ACB30361.1| MYB transcription factor [Capsicum annuum]              67   2e-16
gb|ABL63124.1| MYB transcription factor [Catharanthus roseus]          66   7e-16
ref|XP_004152452.1| PREDICTED: transcription factor MYB1R1-like ...    64   4e-15

>sp|Q2V9B0.1|MY1R1_SOLTU RecName: Full=Transcription factor MYB1R1; AltName:
           Full=Myb-related protein R1; Short=StMYB1R-1
           gi|82621140|gb|ABB86258.1| putative DNA binding
           protein-like [Solanum tuberosum]
          Length = 297

 Score = 79.0 bits (193), Expect(2) = 7e-20
 Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
 Frame = +2

Query: 221 KSVSMNNLSEYEHPHIVTNNL--NNEEAKVVAEDNGYASADDVVNTQSSAGRCIKERKRG 394
           KSVS+N+LS+YEHP+   NN   +N E+  VA+D GYASADD V  QS++GR   ERKRG
Sbjct: 38  KSVSLNDLSQYEHPNANNNNNGGDNNESSKVAQDEGYASADDAVQHQSNSGR---ERKRG 94

Query: 395 VPWTEE 412
           VPWTEE
Sbjct: 95  VPWTEE 100



 Score = 43.1 bits (100), Expect(2) = 7e-20
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +1

Query: 85  EIMLFGVRVKVDPMRKSVSMN 147
           EIMLFGVRVKVDPMRKSVS+N
Sbjct: 23  EIMLFGVRVKVDPMRKSVSLN 43


>gb|AAX95766.1| Putative DNA binding protein, identical [Solanum lycopersicum]
          Length = 302

 Score = 77.0 bits (188), Expect(2) = 2e-19
 Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
 Frame = +2

Query: 221 KSVSMNNLSEYEHPHIVTNNLN----NEEAKVVAEDNGYASADDVVNTQSSAGRCIKERK 388
           KSVS+N+LS+YE P+   NN N    N E+  VA+D GYASADD V  QS++GR   ERK
Sbjct: 38  KSVSLNDLSQYEQPNANNNNNNGGGDNNESSKVAQDEGYASADDAVQHQSNSGR---ERK 94

Query: 389 RGVPWTEE 412
           RGVPWTEE
Sbjct: 95  RGVPWTEE 102



 Score = 43.1 bits (100), Expect(2) = 2e-19
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +1

Query: 85  EIMLFGVRVKVDPMRKSVSMN 147
           EIMLFGVRVKVDPMRKSVS+N
Sbjct: 23  EIMLFGVRVKVDPMRKSVSLN 43


>gb|ACB30361.1| MYB transcription factor [Capsicum annuum]
          Length = 281

 Score = 67.0 bits (162), Expect(2) = 2e-16
 Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
 Frame = +2

Query: 221 KSVSMNNLSEYEHPHIVTNNLNN----EEAKVVAEDNGYASADDVVNTQSSAGRCIKERK 388
           KSVS+NNLS+YE P+   NN +N     ++     D GYASADD V   S +GR   ERK
Sbjct: 40  KSVSLNNLSQYEQPNSNDNNNSNGGNTNDSSSKVADEGYASADDAVPHHSGSGR---ERK 96

Query: 389 RGVPWTEE 412
           RGVPWTEE
Sbjct: 97  RGVPWTEE 104



 Score = 43.1 bits (100), Expect(2) = 2e-16
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +1

Query: 85  EIMLFGVRVKVDPMRKSVSMN 147
           EIMLFGVRVKVDPMRKSVS+N
Sbjct: 25  EIMLFGVRVKVDPMRKSVSLN 45


>gb|ABL63124.1| MYB transcription factor [Catharanthus roseus]
          Length = 350

 Score = 65.9 bits (159), Expect(2) = 7e-16
 Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 11/75 (14%)
 Frame = +2

Query: 221 KSVSMNNLSEYEHPHIVTNN------LNNEEAKVVAED-----NGYASADDVVNTQSSAG 367
           KSVSMN+LS+YE P  V  N       +N+  KVVA+D      GY SADD V  QS+ G
Sbjct: 62  KSVSMNDLSQYELPSNVNQNGVDNSKNSNDSDKVVADDVVTAGAGYVSADDAVQHQSTGG 121

Query: 368 RCIKERKRGVPWTEE 412
           R   ERKRG+PWTEE
Sbjct: 122 R---ERKRGIPWTEE 133



 Score = 42.7 bits (99), Expect(2) = 7e-16
 Identities = 20/21 (95%), Positives = 20/21 (95%)
 Frame = +1

Query: 85  EIMLFGVRVKVDPMRKSVSMN 147
           E MLFGVRVKVDPMRKSVSMN
Sbjct: 47  EFMLFGVRVKVDPMRKSVSMN 67


>ref|XP_004152452.1| PREDICTED: transcription factor MYB1R1-like [Cucumis sativus]
           gi|449487797|ref|XP_004157805.1| PREDICTED:
           transcription factor MYB1R1-like [Cucumis sativus]
          Length = 307

 Score = 64.3 bits (155), Expect(2) = 4e-15
 Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
 Frame = +2

Query: 221 KSVSMNNLSEYEHP--HIVTNNLNNEEAKVVAEDN------GYASADDVVNTQSSAGRCI 376
           KSVSMNNLS+YEHP    + +N +N +  V A D       GYASADD V   +S G   
Sbjct: 37  KSVSMNNLSQYEHPLEASIDDNSSNCKTTVSAADRKEDSPAGYASADDAV--PNSGGNRE 94

Query: 377 KERKRGVPWTEE 412
           +ERKRGVPWTEE
Sbjct: 95  RERKRGVPWTEE 106



 Score = 41.6 bits (96), Expect(2) = 4e-15
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +1

Query: 76  LTLEIMLFGVRVKVDPMRKSVSMN 147
           +T E MLFGVRV VDPMRKSVSMN
Sbjct: 19  VTKEFMLFGVRVVVDPMRKSVSMN 42


Top