BLASTX nr result

ID: Lithospermum22_contig00005669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005669
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519118.1| ring finger protein, putative [Ricinus commu...   154   2e-35
ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like...   150   6e-34
ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like...   144   3e-32
ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|2...   136   9e-30
ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like...   127   4e-27

>ref|XP_002519118.1| ring finger protein, putative [Ricinus communis]
            gi|223541781|gb|EEF43329.1| ring finger protein, putative
            [Ricinus communis]
          Length = 402

 Score =  154 bits (390), Expect = 2e-35
 Identities = 77/145 (53%), Positives = 100/145 (68%), Gaps = 7/145 (4%)
 Frame = +1

Query: 592  SSKLPVDFSPPLXXXXXXXXXXXXXXTYSRLISRQFVSIQRQYLRWR--RRYAPSSSSAG 765
            ++KLPVDFSPPL              TYSRLISR  + + R++ RWR  RRY PSS+   
Sbjct: 43   TAKLPVDFSPPLIAMVVVVATAFLLITYSRLISRYLLRLLRRWKRWRLRRRYLPSSNGGD 102

Query: 766  NMESSPQYPFDHSNEAFYLYSPYGLEETAIRTIPLTIYN-----RKSCVLDCAVCLLEFE 930
            ++ES P  P   S E F++YSPYGL+++ I+ +PL ++      ++S + DCAVCLLEFE
Sbjct: 103  DLESPP--PLFDSPEGFHVYSPYGLDDSVIKALPLFLFTTTKNGKQSIIKDCAVCLLEFE 160

Query: 931  DNDYVRTLPSCSHSFHVDCIDIWLR 1005
            +NDYVRTLP CSH+FHVDCIDIWLR
Sbjct: 161  ENDYVRTLPVCSHAFHVDCIDIWLR 185


>ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
            gi|449472703|ref|XP_004153673.1| PREDICTED: RING-H2
            finger protein ATL65-like [Cucumis sativus]
            gi|449532533|ref|XP_004173235.1| PREDICTED: RING-H2
            finger protein ATL65-like [Cucumis sativus]
          Length = 421

 Score =  150 bits (378), Expect = 6e-34
 Identities = 80/165 (48%), Positives = 106/165 (64%), Gaps = 17/165 (10%)
 Frame = +1

Query: 562  SEYQVPTYSTSSKLPVDFSPPLXXXXXXXXXXXXXXTYSRLISRQFVSI--------QRQ 717
            + +  P+    +KLPVDFSPPL              TYSRLISR  +          +R+
Sbjct: 35   ANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRR 94

Query: 718  YLRWRRR-------YAPSSSSAGNMESSPQYP--FDHSNEAFYLYSPYGLEETAIRTIPL 870
            + RWRRR       Y PSSS  G+++S P     F+ + +AF+++SPYGL+E+ I+TIPL
Sbjct: 95   WRRWRRRRRLAARSYIPSSSG-GDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPL 153

Query: 871  TIYNRKSCVLDCAVCLLEFEDNDYVRTLPSCSHSFHVDCIDIWLR 1005
            ++Y  KS   +CAVCLLEFED+DYVRTLP CSH+FHVDCID+WLR
Sbjct: 154  SVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLR 198


>ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like [Vitis vinifera]
          Length = 396

 Score =  144 bits (364), Expect = 3e-32
 Identities = 79/157 (50%), Positives = 97/157 (61%), Gaps = 16/157 (10%)
 Frame = +1

Query: 583  YSTSSKLPVDFSPPLXXXXXXXXXXXXXXTYSRLISRQ----FVSIQRQYLRW----RRR 738
            Y + SK+PVDFSPPL              TYSRLISR     F+ + R + RW    RRR
Sbjct: 32   YQSPSKVPVDFSPPLIAMVVVVATAFLIVTYSRLISRHLLPPFLRLLRSWRRWHRRRRRR 91

Query: 739  YAPSSSSAGNMESSPQYPFDHSNEAFYLYSPYGLEETAIRTIPLTIYNRKSCVL------ 900
             +   SSAG++ES P      + EA+ ++SPYGL+E+ I+TIPL++Y  K          
Sbjct: 92   RSHMPSSAGDIESPPYNGSFDATEAYQVFSPYGLDESVIKTIPLSLYTAKGLSKHGFVDD 151

Query: 901  --DCAVCLLEFEDNDYVRTLPSCSHSFHVDCIDIWLR 1005
              DCAVCLLEFEDND VR LP CSH+FHVDCIDIWLR
Sbjct: 152  SRDCAVCLLEFEDNDCVRVLPVCSHAFHVDCIDIWLR 188


>ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|222850231|gb|EEE87778.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  136 bits (342), Expect = 9e-30
 Identities = 69/122 (56%), Positives = 88/122 (72%), Gaps = 10/122 (8%)
 Frame = +1

Query: 670  TYSRLISRQFVSIQRQYLRWRRR----YAPSSSSAGNMESSPQYPFDHSNEAFYLYSPYG 837
            TYSRLISR  + + R++ RWRRR    Y PSS+  G ++S P  P   S E F++YSPYG
Sbjct: 13   TYSRLISRSLLRVIRRWRRWRRRRRRRYPPSSN--GGLDSPP--PLFDSPEGFHVYSPYG 68

Query: 838  LEETAIRTIPLTIYNRKSC------VLDCAVCLLEFEDNDYVRTLPSCSHSFHVDCIDIW 999
            L++  I+TIPL++Y  K+       + DCAVCLLEFED++YVRTLP CSH+FHVDCIDIW
Sbjct: 69   LDDAVIKTIPLSLYTTKNSNSFHKQIKDCAVCLLEFEDDEYVRTLPVCSHAFHVDCIDIW 128

Query: 1000 LR 1005
            LR
Sbjct: 129  LR 130


>ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
          Length = 393

 Score =  127 bits (319), Expect = 4e-27
 Identities = 72/147 (48%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
 Frame = +1

Query: 589  TSSKLPVDFSPPLXXXXXXXXXXXXXXTYSRLISRQFVSIQRQYLRW--RRRYAPSSSSA 762
            TS+   VDF+PPL              TYSRLI+R       + LR   RRR+ PSS   
Sbjct: 26   TSNSPAVDFTPPLIAMVVVVAAAFLVVTYSRLIARHLRPPVHRLLRRFRRRRFLPSS--V 83

Query: 763  GNMESSPQYPFDHSNEAFYLYSPYGLEETAIRTIPLTIYNRK------SCVLDCAVCLLE 924
            G++ES    P+D   +  +++SPYGL+ET I+TIP ++Y  K          DCAVCLLE
Sbjct: 84   GDLES---LPYDSPFDGPHVFSPYGLDETVIKTIPFSLYTAKYDARFDESRYDCAVCLLE 140

Query: 925  FEDNDYVRTLPSCSHSFHVDCIDIWLR 1005
            FED DYVRTLP CSH+FHVDCID WLR
Sbjct: 141  FEDEDYVRTLPVCSHTFHVDCIDAWLR 167