BLASTX nr result
ID: Lithospermum22_contig00005662
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00005662
(2347 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containi... 693 0.0
ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containi... 647 0.0
ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containi... 646 0.0
ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containi... 645 0.0
ref|XP_003602247.1| Pentatricopeptide repeat-containing protein ... 632 e-178
>ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49240-like
[Vitis vinifera]
Length = 672
Score = 693 bits (1789), Expect = 0.0
Identities = 356/593 (60%), Positives = 431/593 (72%)
Frame = +3
Query: 78 MALFKPTFLLHLKSITKXXXXXXXXXXXXXXXXXXXXXXATPEDAAAEXXXXXXXXXIEP 257
MAL K +F LK++TK TPE+AAAE IEP
Sbjct: 1 MALSKASFFTQLKTLTKPHLHHPPPPPLLSLRHLSF---VTPEEAAAERRRRKRRLRIEP 57
Query: 258 PLSTHRHXXXXXXXXXXXXXXXXXXXXLPEPISTLTGNRLNLHNKILKLIRENDLDEAAL 437
PLS+ RH LPEP+S L+GNRLNLHN+IL LIR NDLDEAAL
Sbjct: 58 PLSSLRHQQAQPRQNPNPNHNPNAPK-LPEPVSALSGNRLNLHNRILGLIRVNDLDEAAL 116
Query: 438 YTRHSVYSNCRPTIYTCNAVLTALLRQSKYSDLLSLHRFITQAGIAPNVVTHNLLISAYV 617
TRHS+YSNCRPTI+T N+VL ALLRQS+YSDLLSLHRFITQAG+A NVVTHNLLI+AY+
Sbjct: 117 LTRHSIYSNCRPTIFTVNSVLAALLRQSRYSDLLSLHRFITQAGVAANVVTHNLLINAYL 176
Query: 618 DCRKTDIALEHYKQLVNDAPINPSPTTYRVLVKGLVDNGKIERALELKDEMLEKGLSADP 797
DCRKTD ALEHYKQL+NDAP NPSPTTYR+L+KG+VDNGK+ERALELK+EML KG +ADP
Sbjct: 177 DCRKTDTALEHYKQLINDAPFNPSPTTYRILIKGIVDNGKVERALELKEEMLGKGFAADP 236
Query: 798 VVYSYLMMGRAKSGNGDGVFXXXXXXXXXXXXXXLDGVVYGGLMEGYFLRGMEKEAMDCY 977
VVYSYLM+G ++ N DGVF DGVV G LM+GYFLRGMEKEAM CY
Sbjct: 237 VVYSYLMLGHVRNLNADGVFELYEELKEKLGDVD-DGVVVGSLMKGYFLRGMEKEAMQCY 295
Query: 978 EQAVGEDSKVKMSDVAFNSILIALSRNGKFDEALKLFDRMLTEHDPPRRLTVNVGSYNVM 1157
+AVGE SK++MS VAFNS+L ALS+NGKFDEA+ LF+RM+ E++PPRRL++N+GS+NVM
Sbjct: 296 AEAVGEGSKIRMSAVAFNSVLDALSKNGKFDEAMLLFERMMAEYNPPRRLSMNLGSFNVM 355
Query: 1158 VNGYCADGRFKDAIEVFMRMGEKRCRPDTLSYNNLIEQLCKNDLLVEAEELYKDMGEKGV 1337
V+G+C GRFKDAIEVF +MGEKRC DTLSYNNLIEQLC N +L EAEELY +M KGV
Sbjct: 356 VDGFCTAGRFKDAIEVFRKMGEKRCSADTLSYNNLIEQLCNNGMLAEAEELYGEMANKGV 415
Query: 1338 SPDEYTYGMLMDTCFKENRPDGAAAYFKTMVDAKLRPHLEVYNRLIDGLVKVGRVDEAKS 1517
+PDE+TY +LMDTCFKENR D A YF+ MV+ LRP+L VY++L+DGLVKVG++DEAKS
Sbjct: 416 NPDEFTYVLLMDTCFKENRTDDGAGYFRKMVETGLRPNLAVYSKLVDGLVKVGKIDEAKS 475
Query: 1518 FFDMMVSKLRMNDASYENIMNALFDAGKPDEVIDIIGRMLREDPSDFTDELQEFVREALR 1697
F+D+MV KL+M++ASY+ +M ALF+ GK D+V+ +IG ML +D S+FT +LQEFV+E LR
Sbjct: 476 FYDLMVKKLKMDEASYKFLMKALFEVGKHDDVLKMIGDMLDDDASEFTTDLQEFVKEELR 535
Query: 1698 KEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVASLIPSKLFGNK 1856
KEGR + AV+SL+PSKLFG+K
Sbjct: 536 KEGREEDVVKLMEDKEREKAEAQAKEAAATEAAKASAKAAVSSLLPSKLFGSK 588
>ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49240-like
[Cucumis sativus] gi|449511036|ref|XP_004163845.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Cucumis sativus]
Length = 624
Score = 647 bits (1669), Expect = 0.0
Identities = 328/594 (55%), Positives = 412/594 (69%), Gaps = 1/594 (0%)
Frame = +3
Query: 78 MALFKPTFLLHLKSIT-KXXXXXXXXXXXXXXXXXXXXXXATPEDAAAEXXXXXXXXXIE 254
MAL KP F HLK++T A+ E+A AE IE
Sbjct: 1 MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
Query: 255 PPLSTHRHXXXXXXXXXXXXXXXXXXXXLPEPISTLTGNRLNLHNKILKLIRENDLDEAA 434
PPLS+ +PE IS L+GNRLNLHN+IL LIRENDL+EAA
Sbjct: 61 PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
Query: 435 LYTRHSVYSNCRPTIYTCNAVLTALLRQSKYSDLLSLHRFITQAGIAPNVVTHNLLISAY 614
L+TRHS+YSNCRPTI+T NAVL A LRQSKY+DLLSLHRFITQAG+ PN++THNL+ Y
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
Query: 615 VDCRKTDIALEHYKQLVNDAPINPSPTTYRVLVKGLVDNGKIERALELKDEMLEKGLSAD 794
+DCRK D A+EHYKQL+NDAP NPSPTTYR+L+KGLVDN K+ERA+ELKDEM+EKG + D
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
Query: 795 PVVYSYLMMGRAKSGNGDGVFXXXXXXXXXXXXXXLDGVVYGGLMEGYFLRGMEKEAMDC 974
P++Y YLM G +S + DGVF DGVVYG LM+GYF++ ME+EAM C
Sbjct: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
Query: 975 YEQAVGEDSKVKMSDVAFNSILIALSRNGKFDEALKLFDRMLTEHDPPRRLTVNVGSYNV 1154
YE+ VG++S VKMS +A+NS+L AL RNGKF EAL LFDRM EH PPR L VN+GS+NV
Sbjct: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360
Query: 1155 MVNGYCADGRFKDAIEVFMRMGEKRCRPDTLSYNNLIEQLCKNDLLVEAEELYKDMGEKG 1334
MV+GYC +GRFK+AIEVF +MG+ RC PDTLS+NNLIEQLC N +L EAE LY M +KG
Sbjct: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420
Query: 1335 VSPDEYTYGMLMDTCFKENRPDGAAAYFKTMVDAKLRPHLEVYNRLIDGLVKVGRVDEAK 1514
V+PDE+TYG+LMD+CFK+NR D AAAYF+ MVD+ LRP++ VYN L+D LVK+G++D+AK
Sbjct: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480
Query: 1515 SFFDMMVSKLRMNDASYENIMNALFDAGKPDEVIDIIGRMLREDPSDFTDELQEFVREAL 1694
SFFD+MV KL+M+ +SY+ IM AL ++GK DE+++++ +L +D +F++ELQEFVR L
Sbjct: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
Query: 1695 RKEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVASLIPSKLFGNK 1856
RKE R + AV+SL+ SKLF NK
Sbjct: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANK 594
>ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49240-like
[Glycine max]
Length = 631
Score = 646 bits (1667), Expect = 0.0
Identities = 326/593 (54%), Positives = 414/593 (69%)
Frame = +3
Query: 78 MALFKPTFLLHLKSITKXXXXXXXXXXXXXXXXXXXXXXATPEDAAAEXXXXXXXXXIEP 257
MAL K TFL HL++++ ++PE+AAAE +EP
Sbjct: 1 MALSKATFLTHLRTLSNSHRRPSSCVSIRLLSF------SSPEEAAAERRRRKRQLRMEP 54
Query: 258 PLSTHRHXXXXXXXXXXXXXXXXXXXXLPEPISTLTGNRLNLHNKILKLIRENDLDEAAL 437
PLS LPE +S LTGNRLNLHN+IL LIRENDLDEAAL
Sbjct: 55 PLSALNRTQTAPKPLQSPYYLNPNNPKLPEHVSALTGNRLNLHNRILTLIRENDLDEAAL 114
Query: 438 YTRHSVYSNCRPTIYTCNAVLTALLRQSKYSDLLSLHRFITQAGIAPNVVTHNLLISAYV 617
YTRHS+YSNCRPTI+T NAVL ALLRQS+YSDLLSLHRFITQAG+ PN++THNL+ Y+
Sbjct: 115 YTRHSIYSNCRPTIFTINAVLAALLRQSRYSDLLSLHRFITQAGVVPNIITHNLVFQTYL 174
Query: 618 DCRKTDIALEHYKQLVNDAPINPSPTTYRVLVKGLVDNGKIERALELKDEMLEKGLSADP 797
DCRK D ALEHYKQ +NDAP+NPSPTTYRVL+KGL+DN K+ERA+++K EM KG + DP
Sbjct: 175 DCRKPDTALEHYKQFLNDAPMNPSPTTYRVLIKGLIDNSKLERAMDIKTEMDSKGFAPDP 234
Query: 798 VVYSYLMMGRAKSGNGDGVFXXXXXXXXXXXXXXLDGVVYGGLMEGYFLRGMEKEAMDCY 977
+VY YLM+G A+ +GD + DG+V+G LM+GYF++GMEKEAM+CY
Sbjct: 235 LVYHYLMLGHARVSDGDAILRLYEELRERLGGVVQDGIVFGCLMKGYFVKGMEKEAMECY 294
Query: 978 EQAVGEDSKVKMSDVAFNSILIALSRNGKFDEALKLFDRMLTEHDPPRRLTVNVGSYNVM 1157
E+A+G K KMS V +NS+L ALS+NG+FDEAL+LFDRM+ EH+P +RL+VN+GS+NV+
Sbjct: 295 EEALG---KKKMSAVGYNSVLDALSKNGRFDEALRLFDRMMKEHEPLKRLSVNLGSFNVI 351
Query: 1158 VNGYCADGRFKDAIEVFMRMGEKRCRPDTLSYNNLIEQLCKNDLLVEAEELYKDMGEKGV 1337
V+GYC +GRF++A+EVF +MGE RC PDTLS+NNLI++LC N +VEAEE+Y +M KGV
Sbjct: 352 VDGYCDEGRFEEAMEVFRKMGEYRCSPDTLSFNNLIDRLCDNGRIVEAEEVYGEMEGKGV 411
Query: 1338 SPDEYTYGMLMDTCFKENRPDGAAAYFKTMVDAKLRPHLEVYNRLIDGLVKVGRVDEAKS 1517
SPDE+TYG+LMD CF+ENR D AAAYF+ MVD+ LRP+L VYNRL+ GLVKVG++DEAK
Sbjct: 412 SPDEFTYGLLMDACFRENRADDAAAYFRKMVDSGLRPNLAVYNRLVGGLVKVGKIDEAKG 471
Query: 1518 FFDMMVSKLRMNDASYENIMNALFDAGKPDEVIDIIGRMLREDPSDFTDELQEFVREALR 1697
FF++MV KL+M+ SY+ IM L D G+ DE++ I+ +L ++ DF +E QEFV+ LR
Sbjct: 472 FFELMVKKLKMDVTSYQFIMKVLSDEGRLDEMLKIVDTLLDDNGVDFDEEFQEFVKGELR 531
Query: 1698 KEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVASLIPSKLFGNK 1856
KEGR R AVASL+PSKLFGNK
Sbjct: 532 KEGREEELTKLMEEKERLKAEAKAKEIEAAEAAKRSARAAVASLLPSKLFGNK 584
>ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49240-like
[Glycine max]
Length = 632
Score = 645 bits (1664), Expect = 0.0
Identities = 328/594 (55%), Positives = 415/594 (69%), Gaps = 1/594 (0%)
Frame = +3
Query: 78 MALFKPTFLLHLKSITKXXXXXXXXXXXXXXXXXXXXXXATPEDAAAEXXXXXXXXXIEP 257
MAL K TFL HL++++ ++PE+AAAE +EP
Sbjct: 1 MALSKATFLTHLRALSNPRRRHPSSVSLRLISF------SSPEEAAAERRRRKRQLRMEP 54
Query: 258 PLSTHRHXXXXXXXXXXXXXXXXXXXXLPEPISTLTGNRLNLHNKILKLIRENDLDEAAL 437
PLS LPE +S+LTGNRLNLHN+IL LIRENDLDEAAL
Sbjct: 55 PLSALNRTQTAPKPQSSPYYLNPNNPKLPEHVSSLTGNRLNLHNRILTLIRENDLDEAAL 114
Query: 438 YTRHSVYSNCRPTIYTCNAVLTALLRQSKYSDLLSLHRFITQAGIAPNVVTHNLLISAYV 617
YTRHS+YSNCRPTI+T NAVL ALLRQS+YSD LSLHRFITQAG+ PN++THNL+ Y+
Sbjct: 115 YTRHSIYSNCRPTIFTINAVLAALLRQSRYSDFLSLHRFITQAGVVPNIITHNLVFQTYL 174
Query: 618 DCRKTDIALEHYKQLVNDAPINPSPTTYRVLVKGLVDNGKIERALELKDEMLEKGLSADP 797
DCRK D ALEHYKQ +NDAP+NPSPTTYRVL+KGL+DN K+ERALE+K EM +G S DP
Sbjct: 175 DCRKPDTALEHYKQFLNDAPMNPSPTTYRVLIKGLIDNNKLERALEIKTEMDSRGFSPDP 234
Query: 798 VVYSYLMMGRAKSGNGDGVFXXXXXXXXXXXXXXLDGVVYGGLMEGYFLRGMEKEAMDCY 977
+VY YLM+G + +GDGV DGVV+G LM+GYFL+GMEKEAM+CY
Sbjct: 235 LVYHYLMLGHTRVSDGDGVLRLYEELRERLGGVVEDGVVFGCLMKGYFLKGMEKEAMECY 294
Query: 978 EQAVGEDSKVKMSDVAFNSILIALSRNGKFDEALKLFDRMLTEHDPPRRLTVNVGSYNVM 1157
E+ +G K KMS V +NS+L ALS+NG+ DEAL+LFDRM+ E++PP+RL+VN+GS+NV+
Sbjct: 295 EEVLG---KKKMSAVGYNSVLDALSKNGRLDEALRLFDRMMKEYEPPKRLSVNLGSFNVI 351
Query: 1158 VNGYCADGRFKDAIEVFMRMGEKR-CRPDTLSYNNLIEQLCKNDLLVEAEELYKDMGEKG 1334
V+GYC +GRF++A+EVF ++GE R C PDTLS+NNLIE+LC N +VEAEE+Y +M KG
Sbjct: 352 VDGYCGEGRFEEAMEVFRKIGEYRGCSPDTLSFNNLIERLCDNGRIVEAEEVYGEMEGKG 411
Query: 1335 VSPDEYTYGMLMDTCFKENRPDGAAAYFKTMVDAKLRPHLEVYNRLIDGLVKVGRVDEAK 1514
VSPDE+TYG+LMD CF+ENR D +AAYF+ MVD+ LRP+L VYNRL+DGLVKVG++DEAK
Sbjct: 412 VSPDEFTYGLLMDACFRENRADDSAAYFRKMVDSGLRPNLAVYNRLVDGLVKVGKIDEAK 471
Query: 1515 SFFDMMVSKLRMNDASYENIMNALFDAGKPDEVIDIIGRMLREDPSDFTDELQEFVREAL 1694
FF++MV KL+M+ ASY+ +M L D G+ DE++ I+ +L ++ DF +E QEFV+ L
Sbjct: 472 GFFELMVKKLKMDVASYQFMMKVLSDEGRLDEMLQIVDTLLDDNGVDFDEEFQEFVKGEL 531
Query: 1695 RKEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVASLIPSKLFGNK 1856
RKEGR R AVASL+PSKLFGNK
Sbjct: 532 RKEGREEELTKLIEEKERLKAEAKAKDIEAAEAAKRSARAAVASLLPSKLFGNK 585
>ref|XP_003602247.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491295|gb|AES72498.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 704
Score = 632 bits (1629), Expect = e-178
Identities = 313/549 (57%), Positives = 400/549 (72%), Gaps = 5/549 (0%)
Frame = +3
Query: 78 MALFKPTFLLHLKSITKXXXXXXXXXXXXXXXXXXXXXXATPEDAAAEXXXXXXXXXIEP 257
MAL K TFL HLK++ A+PE+AAAE IEP
Sbjct: 1 MALSKATFLTHLKTLAHPHLRIRPPYSLCPRFLSF----ASPEEAAAERRRRKRQLRIEP 56
Query: 258 PLST-----HRHXXXXXXXXXXXXXXXXXXXXLPEPISTLTGNRLNLHNKILKLIRENDL 422
PLS + LPE S LTGNR+NLHN IL LIR+NDL
Sbjct: 57 PLSALNRNQQQSPNPNPKSQSPPYYLNPTDPKLPEHASALTGNRVNLHNTILTLIRQNDL 116
Query: 423 DEAALYTRHSVYSNCRPTIYTCNAVLTALLRQSKYSDLLSLHRFITQAGIAPNVVTHNLL 602
DEAALYTRHS+YSNCRPTI+T NAVL AL RQS+YSDLLSLHRFITQAG+ PN++T+NL+
Sbjct: 117 DEAALYTRHSIYSNCRPTIFTINAVLFALFRQSRYSDLLSLHRFITQAGVVPNIITYNLI 176
Query: 603 ISAYVDCRKTDIALEHYKQLVNDAPINPSPTTYRVLVKGLVDNGKIERALELKDEMLEKG 782
Y+DCRK D ALE++KQ + DAP NPSPTT+R+L+KGLVDN +++RA+++KD+M G
Sbjct: 177 FQTYLDCRKPDTALENFKQFIKDAPFNPSPTTFRILIKGLVDNNRLDRAMDIKDQMNASG 236
Query: 783 LSADPVVYSYLMMGRAKSGNGDGVFXXXXXXXXXXXXXXLDGVVYGGLMEGYFLRGMEKE 962
+ DP+VY YLM+G A+S +GDGV DGVV G LM+GYFL+GMEKE
Sbjct: 237 FAPDPLVYHYLMLGHARSSDGDGVLRVYEELKEKLGGVVEDGVVLGCLMKGYFLKGMEKE 296
Query: 963 AMDCYEQAVGEDSKVKMSDVAFNSILIALSRNGKFDEALKLFDRMLTEHDPPRRLTVNVG 1142
AM+CY++ E K MSD+A+NS+L AL++NGKFDEA++LFDRM+ EH+PP +L VN+G
Sbjct: 297 AMECYQEVFVEGKK--MSDIAYNSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKLAVNLG 354
Query: 1143 SYNVMVNGYCADGRFKDAIEVFMRMGEKRCRPDTLSYNNLIEQLCKNDLLVEAEELYKDM 1322
S+NVMV+GYCA+G+FK+AIEVF MGE RC+PDTLS+NNLIEQLC N +++EAEE+Y +M
Sbjct: 355 SFNVMVDGYCAEGKFKEAIEVFRSMGESRCKPDTLSFNNLIEQLCNNGMILEAEEVYGEM 414
Query: 1323 GEKGVSPDEYTYGMLMDTCFKENRPDGAAAYFKTMVDAKLRPHLEVYNRLIDGLVKVGRV 1502
KGV+PDEYTYG+LMDTCFKENRPD AA+YFK MV++ LRP+L VYNRL+DGLVKVG++
Sbjct: 415 EGKGVNPDEYTYGLLMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDGLVKVGKI 474
Query: 1503 DEAKSFFDMMVSKLRMNDASYENIMNALFDAGKPDEVIDIIGRMLREDPSDFTDELQEFV 1682
D+AK FFD+MV KL+M+ ASY+ +M L +AG+ D+V+ I+ +L ++ DF +E QEFV
Sbjct: 475 DDAKFFFDLMVKKLKMDVASYQFMMKVLSEAGRLDDVLQIVNMLLDDNGVDFDEEFQEFV 534
Query: 1683 REALRKEGR 1709
+ LRKEGR
Sbjct: 535 KVELRKEGR 543