BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005627
         (1834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   512   e-142
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   509   e-142
ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|2...   498   e-138
ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]      494   e-137

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  512 bits (1319), Expect = e-142
 Identities = 274/480 (57%), Positives = 342/480 (71%), Gaps = 3/480 (0%)
 Frame = +2

Query: 404  MSLSGKGSFASDSKL-TTLKPTSLNPHAAEFVPFSLQXXXXXXXXXXXXPKGATSAGVTL 580
            MSLS KG+  ++ KL +T K T+LNP+AAEFVPF+L+             +   S   TL
Sbjct: 1    MSLSKKGNPINNIKLDSTAKVTTLNPNAAEFVPFALRSSSGSTSTGDASARFTPSG--TL 58

Query: 581  GKAVLDXXXXXXXXXXXXXXXRYWRQQLPDDIIPDFNVVGEDDSQXXXXXXXXXXAISNV 760
            GKA LD               +YWR QLPDDI PDF V+GED+SQ          ++ + 
Sbjct: 59   GKAKLDRSESSISNNSDEEAHQYWRCQLPDDITPDFKVMGEDESQALGGLSLAGLSLHDS 118

Query: 761  NETSRFPASARSDLMFKARQELSPGPIGGNRFSEQVRSPLS-YGENLPADYFRTNSTNSW 937
             ETSRF  SA S  +   +QELSP  + GN F++++R   S YGE+  +  F       W
Sbjct: 119  TETSRF--SAGSGYILNEQQELSPHHVNGNSFTDKMRYSASPYGEDPSSATFLHLPNKPW 176

Query: 938  DEQITDYDQLIANVRGGPQLNSNVRDGFLPNMLHEQPQMDYTDVNPLEFLSYQFPGFSAE 1117
            D+QI   DQL++N R G   N N R GF+ +ML+E   +D TD+NPLEFL+ QFPGF+AE
Sbjct: 177  DKQIVHGDQLLSNGREGTPYNGNSRHGFVNDMLNEHAMVDETDMNPLEFLALQFPGFAAE 236

Query: 1118 SLGEVFFANGGDLNLTIEMLTQLELQIDSGLNQNGGAKAVSSPNLSALDFPALSAAEGEN 1297
            SL EV+FAN  DLN+TIEMLTQLELQ+D G +QN  +K +S+PNLS LDFP+L   +G+N
Sbjct: 237  SLTEVYFANECDLNMTIEMLTQLELQVDGGFSQNMNSKTLSAPNLSGLDFPSLPVPDGQN 296

Query: 1298 DLPKITDDDVLHA-NSYRPSDKDSMLLFRSSSSIPSRGQIDFASAVKKMASQDSGIWKYD 1474
             LPK   DD+    N YR SDKD++L+F+S+SSIPSRG  DFASAV+K+A+QDSGIWK+D
Sbjct: 297  GLPKYAGDDIQQGVNPYRSSDKDNLLMFKSNSSIPSRGATDFASAVRKLATQDSGIWKFD 356

Query: 1475 RNGSPNASVGSSRSSHVLASSYSSGQGRGVYGDRLQPRASTRAPPVWLETGEAVANMYSE 1654
            RNG+ + +VGSSRSSHVLASSY+SG GRG YGDRLQ R S R  P W+ETGEAVANMYSE
Sbjct: 357  RNGTADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGEAVANMYSE 416

Query: 1655 VREDARDHARVRNAYFEQARQAYLIGNKALAKELSVKGQLHNMQMKEAHGKAQESIYRQR 1834
            +RE+ARDHAR+RNAYFEQA+QAYLIGNKALAKELS+KG+LH++ MK AHGKAQE+IYRQR
Sbjct: 417  LREEARDHARLRNAYFEQAQQAYLIGNKALAKELSLKGKLHSIHMKAAHGKAQEAIYRQR 476


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  509 bits (1311), Expect = e-142
 Identities = 283/492 (57%), Positives = 343/492 (69%), Gaps = 15/492 (3%)
 Frame = +2

Query: 404  MSLSGKGSFASDSKLTT-LKPTSLNPHAAEFVPFSLQXXXXXXXXXXXXPKGATSAGVT- 577
            MSLS KGS  + +KL    K T+LNP+AAEFVPFSL+            P G+TS     
Sbjct: 1    MSLSKKGSQTNTTKLNIPSKATALNPNAAEFVPFSLRSLSS--------PSGSTSNAAAT 52

Query: 578  ---------LGKAVLDXXXXXXXXXXXXXXXRYWRQQLPDDIIPDFNVVGEDDSQXXXXX 730
                     +GKAVLD               ++WR QLPDDI PDF V+GED+SQ     
Sbjct: 53   TARFATSGPVGKAVLDRSESSISTTSDEEAHQFWRHQLPDDITPDFKVMGEDESQSLGGL 112

Query: 731  XXXXXAISNVNETSRFPASARSDLMFKARQELSPGPIGGNRFSEQVRSPL-SYGEN-LPA 904
                 ++ + +E  +FPAS  S  +   +QE SP  I G+ FSE++R  + SYGE+   A
Sbjct: 113  SLAGLSLHDSSEVPKFPASVGSGYILTEQQEPSPRHINGSSFSEKMRYAIASYGEDPTSA 172

Query: 905  DYFRTNSTNSWDEQITDYDQLIANVRGGPQLNSNVRDGFLPNMLHEQPQMDYTDVNPLEF 1084
              +    T  WD+QI + D L+ N R     N N R GF+ +ML EQ  +D  D+NPL+F
Sbjct: 173  AGYLNLPTKPWDKQIINNDHLLGNGREVHPYNGNSRRGFMNDMLGEQAIVDEPDMNPLDF 232

Query: 1085 LSYQFPGFSAESLGEVFFANGGDLNLTIEMLTQLELQIDSGLNQNGGAKAVSSPNLSALD 1264
            L+  FPGF+AESL EV+FANG DLNLTIEMLTQLELQ+D G NQN  +KA+S+PNLSA+D
Sbjct: 233  LASHFPGFAAESLAEVYFANGYDLNLTIEMLTQLELQVDGGFNQNMNSKALSAPNLSAMD 292

Query: 1265 FPALSAAEGENDLPKITDDDVLHA-NSYRPSDKDSMLLFRSSSSIPSRG-QIDFASAVKK 1438
            FPAL   + +N   K + DD+  + N YR SDK+++LLF+SSSS PSRG  IDFASAV+K
Sbjct: 293  FPALPVPDSQNSPSKYSGDDIQQSGNPYRSSDKENILLFKSSSSTPSRGGAIDFASAVRK 352

Query: 1439 MASQDSGIWKYDRNGSPNASVGSSRSSHVLASSYSSGQGRGVYGDRLQPRASTRAPPVWL 1618
            +ASQDSGIWKY+RNGS +++VGSSRSSHVLASSYSSG GRG+Y +R Q R S RA PVWL
Sbjct: 353  LASQDSGIWKYERNGSADSAVGSSRSSHVLASSYSSGNGRGIYSERAQNRGSARAAPVWL 412

Query: 1619 ETGEAVANMYSEVREDARDHARVRNAYFEQARQAYLIGNKALAKELSVKGQLHNMQMKEA 1798
            ETGEAVANMYSE+RE+ARDHAR+RNAYFEQARQAYLIGNKALAKELSVKGQLHNM MK A
Sbjct: 413  ETGEAVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAA 472

Query: 1799 HGKAQESIYRQR 1834
            HGKAQESIYR R
Sbjct: 473  HGKAQESIYRLR 484


>ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|222865637|gb|EEF02768.1|
            predicted protein [Populus trichocarpa]
          Length = 583

 Score =  498 bits (1281), Expect = e-138
 Identities = 271/483 (56%), Positives = 334/483 (69%), Gaps = 6/483 (1%)
 Frame = +2

Query: 404  MSLSGKGSFASDSKLTTL-KPTSLNPHAAEFVPFSLQXXXXXXXXXXXXPKGATSAGV-- 574
            M+LS KGS  +D+KL+   K T+LNP+AAEFVPFSL+               AT      
Sbjct: 1    MNLSKKGSLTNDTKLSLPNKATTLNPNAAEFVPFSLRSSSSPSGSTSNTTDAATKLATSG 60

Query: 575  TLGKAVLDXXXXXXXXXXXXXXXRYWRQQLPDDIIPDFNVVGEDDSQXXXXXXXXXXAIS 754
            T+GK+VLD               ++WR QLPDDI PDF V+ ED+SQ          ++ 
Sbjct: 61   TVGKSVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMNEDESQGLGGLSLAGLSLH 120

Query: 755  NVNETSRFPASARSDLMFKARQELSPGPIGGNRFSEQVRSPL-SYGENLPADYFRTNSTN 931
            + +E  RF AS+RS  +   +QE SP  I G+ FSE +R  + SYGE+  +  F    T 
Sbjct: 121  DSSEVPRFHASSRSGYVLTEQQEPSPHHINGSSFSENMRYAVASYGEDPTSASFLNLPTK 180

Query: 932  SWDEQITDYDQLIANVRGGPQLNSNVRDGFLPNMLHEQPQMDYTDVNPLEFLSYQFPGFS 1111
             WD+QI + DQL++N R     N N R GF   +L E   +D T++NPLEFL+ QFPGF+
Sbjct: 181  PWDKQIANSDQLLSNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLEFLASQFPGFA 240

Query: 1112 AESLGEVFFANGGDLNLTIEMLTQLELQIDSGLNQNGGAKAVSSP-NLSALDFPALSAAE 1288
            AESL EV+FAN  DLNLTIEMLTQLELQ+D G NQ   +K VS+P NLSALDFPAL+  +
Sbjct: 241  AESLAEVYFANACDLNLTIEMLTQLELQVDGGFNQTTNSKTVSAPTNLSALDFPALTVPD 300

Query: 1289 GENDLPKITDDDVLHAN-SYRPSDKDSMLLFRSSSSIPSRGQIDFASAVKKMASQDSGIW 1465
             +N   K   DD+  A   YR S+KD+ML+F+S +S  SRG +DFASAV+K+ASQDS +W
Sbjct: 301  NQNGPSKYAGDDLQQAGIPYRSSNKDNMLVFKSGASFSSRGAVDFASAVRKLASQDSSMW 360

Query: 1466 KYDRNGSPNASVGSSRSSHVLASSYSSGQGRGVYGDRLQPRASTRAPPVWLETGEAVANM 1645
             +DRNGS +++VGSSRSSHVLAS+YS G GRG+Y DR Q R S +A PVWLETGEAVA+M
Sbjct: 361  NHDRNGSADSTVGSSRSSHVLASAYSGGHGRGIYADRSQSRGSGQAAPVWLETGEAVASM 420

Query: 1646 YSEVREDARDHARVRNAYFEQARQAYLIGNKALAKELSVKGQLHNMQMKEAHGKAQESIY 1825
            YSE+RE+ARDHAR+RNAY EQARQAYLIGNKALAKELS KGQLHNM MKEAHGKAQESIY
Sbjct: 421  YSEMREEARDHARIRNAYLEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQESIY 480

Query: 1826 RQR 1834
            RQR
Sbjct: 481  RQR 483


>ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|222855432|gb|EEE92979.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  496 bits (1277), Expect = e-138
 Identities = 269/482 (55%), Positives = 331/482 (68%), Gaps = 5/482 (1%)
 Frame = +2

Query: 404  MSLSGKGSFASDSKLTT-LKPTSLNPHAAEFVPFSLQXXXXXXXXXXXXPKGAT--SAGV 574
            MSLS KGS  +D+KL    K T+LNP+AAEFVPFSL+               AT  +   
Sbjct: 1    MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60

Query: 575  TLGKAVLDXXXXXXXXXXXXXXXRYWRQQLPDDIIPDFNVVGEDDSQXXXXXXXXXXAIS 754
            T+GKAVLD               ++WR QLPDDI PDF V+ +D+SQ          ++ 
Sbjct: 61   TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120

Query: 755  NVNETSRFPASARSDLMFKARQELSPGPIGGNRFSEQVRSP-LSYGENLPADYFRTNSTN 931
            + +E  RF AS+RS  +   +QE SP  + G+ F E++R P  SYGE+  +  F    T 
Sbjct: 121  D-SEVPRFHASSRSGYVLTEQQEPSPRHMNGSSFGEKMRYPSASYGEDPSSASFLNLPTK 179

Query: 932  SWDEQITDYDQLIANVRGGPQLNSNVRDGFLPNMLHEQPQMDYTDVNPLEFLSYQFPGFS 1111
             WD+QI + D L+ N R     N N R GF   +L E   +D T++NPL FL+ QFPGF+
Sbjct: 180  PWDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLGFLASQFPGFA 239

Query: 1112 AESLGEVFFANGGDLNLTIEMLTQLELQIDSGLNQNGGAKAVSSPNLSALDFPALSAAEG 1291
             ESL EV+FA+G DLNLT+EMLTQLELQ+D   NQN  +K +S+PNLSALDFPAL+  + 
Sbjct: 240  TESLAEVYFASGCDLNLTVEMLTQLELQVDGSFNQNTNSKTLSAPNLSALDFPALTVLDN 299

Query: 1292 ENDLPKITDDDVLHAN-SYRPSDKDSMLLFRSSSSIPSRGQIDFASAVKKMASQDSGIWK 1468
            +N   K T DD+  A+  YR S+KD+MLLF+   S  SRG +DFASAV+K+ASQDS +WK
Sbjct: 300  QNGSSKYTGDDLQQASVPYRSSNKDNMLLFKPGGSFSSRGAVDFASAVRKLASQDSSMWK 359

Query: 1469 YDRNGSPNASVGSSRSSHVLASSYSSGQGRGVYGDRLQPRASTRAPPVWLETGEAVANMY 1648
            +DRNGS +++VGSSRSSHVL S+Y  G GRG+Y DRLQ R S R  PVWLETGEAVANMY
Sbjct: 360  HDRNGSADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEAVANMY 419

Query: 1649 SEVREDARDHARVRNAYFEQARQAYLIGNKALAKELSVKGQLHNMQMKEAHGKAQESIYR 1828
            SE+RE+ARDHAR+RNAYFEQARQAYLIGNKALAKELSVKGQLHNM MKEAHGKAQESIY 
Sbjct: 420  SEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQESIYH 479

Query: 1829 QR 1834
            QR
Sbjct: 480  QR 481


>gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 581

 Score =  494 bits (1271), Expect = e-137
 Identities = 268/482 (55%), Positives = 330/482 (68%), Gaps = 5/482 (1%)
 Frame = +2

Query: 404  MSLSGKGSFASDSKLTT-LKPTSLNPHAAEFVPFSLQXXXXXXXXXXXXPKGAT--SAGV 574
            MSLS KGS  +D+KL    K T+LNP+AAEFVPFSL+               AT  +   
Sbjct: 1    MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60

Query: 575  TLGKAVLDXXXXXXXXXXXXXXXRYWRQQLPDDIIPDFNVVGEDDSQXXXXXXXXXXAIS 754
            T+GKAVLD               ++WR QLPDDI PDF V+ +D+SQ          ++ 
Sbjct: 61   TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120

Query: 755  NVNETSRFPASARSDLMFKARQELSPGPIGGNRFSEQVRSP-LSYGENLPADYFRTNSTN 931
            + +E  RF AS+RS  +   +QE SP  + G+ F E++R P  SYGE+  +  F    T 
Sbjct: 121  D-SEVPRFHASSRSGYVLTEQQEPSPRHMNGSSFGEKMRYPSASYGEDPSSASFLNLPTK 179

Query: 932  SWDEQITDYDQLIANVRGGPQLNSNVRDGFLPNMLHEQPQMDYTDVNPLEFLSYQFPGFS 1111
             WD+QI + D L+ N R     N N R GF   +L E   +D T++NPL FL+ QFPGF+
Sbjct: 180  PWDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLGFLASQFPGFA 239

Query: 1112 AESLGEVFFANGGDLNLTIEMLTQLELQIDSGLNQNGGAKAVSSPNLSALDFPALSAAEG 1291
             ESL EV+FA+G DLNLT+EMLTQLELQ+D   NQN  +K +S+PNLSALDFPAL+  + 
Sbjct: 240  TESLAEVYFASGCDLNLTVEMLTQLELQVDGSFNQNTNSKTLSAPNLSALDFPALTVLDN 299

Query: 1292 ENDLPKITDDDVLHAN-SYRPSDKDSMLLFRSSSSIPSRGQIDFASAVKKMASQDSGIWK 1468
            +N   K T DD+  A+  YR S+KD+ LLF+   S  SRG +DFASAV+K+ASQDS +WK
Sbjct: 300  QNGSSKYTGDDLQQASVPYRSSNKDNTLLFKPGGSFSSRGAVDFASAVRKLASQDSSMWK 359

Query: 1469 YDRNGSPNASVGSSRSSHVLASSYSSGQGRGVYGDRLQPRASTRAPPVWLETGEAVANMY 1648
            +DRNGS +++VGSSRSSHVL S+Y  G GRG+Y DRLQ R S R  PVWLETGEAVANMY
Sbjct: 360  HDRNGSADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEAVANMY 419

Query: 1649 SEVREDARDHARVRNAYFEQARQAYLIGNKALAKELSVKGQLHNMQMKEAHGKAQESIYR 1828
            SE+RE+ARDHAR+RNAYFEQARQAYLIGNKALAKELSVKGQLHNM MKEAHGKAQESIY 
Sbjct: 420  SEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQESIYH 479

Query: 1829 QR 1834
            QR
Sbjct: 480  QR 481