BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005600
         (1407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro...   637   e-180
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit...   621   e-175
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro...   620   e-175
ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO larg...   613   e-173
ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|1...   613   e-173

>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
            chloroplastic [Vitis vinifera]
            gi|297743227|emb|CBI36094.3| unnamed protein product
            [Vitis vinifera]
          Length = 609

 Score =  637 bits (1642), Expect = e-180
 Identities = 327/364 (89%), Positives = 351/364 (96%)
 Frame = -3

Query: 1096 GRREKVVLQKRCSPKVQAMAKELHFNKDGSAIRKLQAGVNKLADLVGVTLGPKGRNVVLE 917
            GR++ +VLQKRCSPKV+AMAKEL+FNKDGSAI+KLQ GVNKLADLVGVTLGPKGRNVVLE
Sbjct: 46   GRKQSMVLQKRCSPKVRAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLE 105

Query: 916  SKYGSPKIVNDGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIT 737
            SKYGSPKIVNDGVTVAREVELEDPVENIGA+LVRQAASKTNDLAGDGTTTSVVLAQGLIT
Sbjct: 106  SKYGSPKIVNDGVTVAREVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIT 165

Query: 736  EGVKVVAAGANPIQITRGIERTTKALVAELKLMSKEVEDSELADVAAVSAGNNYEIGNMI 557
            EGVKVVAAGANP+QITRGIE TTKALVAELKLMSKEVEDSELADVAAVSAGNNYE+G MI
Sbjct: 166  EGVKVVAAGANPVQITRGIENTTKALVAELKLMSKEVEDSELADVAAVSAGNNYEVGYMI 225

Query: 556  ADAMSKVGRKGVVTLEEGRSSENTLQVVEGMQFDRGYISPYFVTDSEKMTVEYDNCKLLL 377
            A+AM +VGRKGVVTLEEG+S+EN L VVEGMQFDRGYISPYFVTDSEKM VEY+NCKLLL
Sbjct: 226  AEAMGQVGRKGVVTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 285

Query: 376  VDKKITNARDLVTVLEEAIRGGFPILIIAEDIEQEALATLVVNRLRGSLKIAALKAPGFG 197
            VDKKITNARDL+ VLE+AI+GG+PILIIAEDIEQEALATLVVN+LRG+LKIAALKAPGFG
Sbjct: 286  VDKKITNARDLINVLEDAIKGGYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFG 345

Query: 196  ERKSQYLDDIAVLTGGTVIREEVGLSLDSAGSDVLGHAAKVVLTKDRTTIVGDGSTEDAV 17
            ERKSQYLDDIA+LTGGTVIREEVGLSLD A  +VLGHAAKVVLTKD TTIVGDGST++AV
Sbjct: 346  ERKSQYLDDIAILTGGTVIREEVGLSLDKAEKEVLGHAAKVVLTKDTTTIVGDGSTQEAV 405

Query: 16   NKRV 5
            NKRV
Sbjct: 406  NKRV 409


>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus
            communis] gi|223537354|gb|EEF38983.1| rubisco subunit
            binding-protein beta subunit, rubb, putative [Ricinus
            communis]
          Length = 605

 Score =  621 bits (1601), Expect = e-175
 Identities = 319/390 (81%), Positives = 354/390 (90%)
 Frame = -3

Query: 1174 SPAADKKLRNVEXXXXXXXXXXXSLGGRREKVVLQKRCSPKVQAMAKELHFNKDGSAIRK 995
            +P  DKK  +             S  GRR+ VVL++  SPK+ AMAK+LHFNKDGSAI+K
Sbjct: 16   APNVDKKFASTSNRLSSFASISGSAFGRRQNVVLRRSRSPKICAMAKDLHFNKDGSAIKK 75

Query: 994  LQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGAKLVR 815
            LQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA+EVELEDPVENIGAKLVR
Sbjct: 76   LQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVR 135

Query: 814  QAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPIQITRGIERTTKALVAELKLMS 635
            QAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANP+ ITRGIE+T+KALV ELK MS
Sbjct: 136  QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVTELKSMS 195

Query: 634  KEVEDSELADVAAVSAGNNYEIGNMIADAMSKVGRKGVVTLEEGRSSENTLQVVEGMQFD 455
            KEVEDSELADVAAVSAGNNYE+GNMIA+AMS+VGRKGVVTLEEG+S+EN+L VVEGMQFD
Sbjct: 196  KEVEDSELADVAAVSAGNNYEVGNMIAEAMSRVGRKGVVTLEEGKSAENSLYVVEGMQFD 255

Query: 454  RGYISPYFVTDSEKMTVEYDNCKLLLVDKKITNARDLVTVLEEAIRGGFPILIIAEDIEQ 275
            RGYISPYFVTDSEKM VEY+NCKLLLVDKKITNARDL+ +LE+AIRGG+PIL+IAEDIEQ
Sbjct: 256  RGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEDAIRGGYPILVIAEDIEQ 315

Query: 274  EALATLVVNRLRGSLKIAALKAPGFGERKSQYLDDIAVLTGGTVIREEVGLSLDSAGSDV 95
            EALATLVVN+LRG+LKIAALKAPGFGERKSQYLDDIA+LTGGTV+REEVGLSLD  G ++
Sbjct: 316  EALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVVREEVGLSLDKVGKEI 375

Query: 94   LGHAAKVVLTKDRTTIVGDGSTEDAVNKRV 5
            LG+A+KVVLTKD TTIVGDGST++AV KRV
Sbjct: 376  LGNASKVVLTKDTTTIVGDGSTQEAVTKRV 405


>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
            chloroplastic [Vitis vinifera]
            gi|297746501|emb|CBI16557.3| unnamed protein product
            [Vitis vinifera]
          Length = 608

 Score =  620 bits (1600), Expect = e-175
 Identities = 318/364 (87%), Positives = 349/364 (95%)
 Frame = -3

Query: 1096 GRREKVVLQKRCSPKVQAMAKELHFNKDGSAIRKLQAGVNKLADLVGVTLGPKGRNVVLE 917
            GRR+ VVL++  SP++ AMAK+L+FNKDGSAI+KLQ GVNKLADLVGVTLGPKGRNVVLE
Sbjct: 45   GRRQNVVLRRTRSPRINAMAKDLYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLE 104

Query: 916  SKYGSPKIVNDGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIT 737
            SKYGSPKIVNDGVTVA+EVELEDPVENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLI 
Sbjct: 105  SKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIA 164

Query: 736  EGVKVVAAGANPIQITRGIERTTKALVAELKLMSKEVEDSELADVAAVSAGNNYEIGNMI 557
            EGVKVVAAGANP+ ITRGIE+TTK+LVAELKL+SKEVEDSELADVAAVSAGNN+E+GNMI
Sbjct: 165  EGVKVVAAGANPVLITRGIEKTTKSLVAELKLISKEVEDSELADVAAVSAGNNHEVGNMI 224

Query: 556  ADAMSKVGRKGVVTLEEGRSSENTLQVVEGMQFDRGYISPYFVTDSEKMTVEYDNCKLLL 377
            A+AMSKVGRKGVVTLEEG+S+EN L VVEGMQFDRGYISPYFVTDSEKM VE++NCKLLL
Sbjct: 225  AEAMSKVGRKGVVTLEEGKSAENHLYVVEGMQFDRGYISPYFVTDSEKMAVEFENCKLLL 284

Query: 376  VDKKITNARDLVTVLEEAIRGGFPILIIAEDIEQEALATLVVNRLRGSLKIAALKAPGFG 197
            VDKKITNARDL+ VLE+AIRGG+PILIIAEDIEQEALATLVVN+LRGSLKIAALKAPGFG
Sbjct: 285  VDKKITNARDLINVLEDAIRGGYPILIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFG 344

Query: 196  ERKSQYLDDIAVLTGGTVIREEVGLSLDSAGSDVLGHAAKVVLTKDRTTIVGDGSTEDAV 17
            ERKSQYLDDIA+LTGGTVIR+EVGL+LD A  +VLGHAAKVVLTKD TTIVGDGST++AV
Sbjct: 345  ERKSQYLDDIAILTGGTVIRDEVGLTLDKAEKEVLGHAAKVVLTKDTTTIVGDGSTQEAV 404

Query: 16   NKRV 5
            NKRV
Sbjct: 405  NKRV 408


>ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO large subunit-binding protein
            subunit beta, chloroplastic-like [Cucumis sativus]
          Length = 608

 Score =  613 bits (1581), Expect = e-173
 Identities = 318/390 (81%), Positives = 353/390 (90%)
 Frame = -3

Query: 1174 SPAADKKLRNVEXXXXXXXXXXXSLGGRREKVVLQKRCSPKVQAMAKELHFNKDGSAIRK 995
            S A DKKL +                 +R+ VVL++  S K+ AMAKELHFN+DGSAI+K
Sbjct: 19   SRAMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKISAMAKELHFNQDGSAIKK 78

Query: 994  LQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGAKLVR 815
            LQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA+EVELEDPVENIGAKLVR
Sbjct: 79   LQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVR 138

Query: 814  QAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPIQITRGIERTTKALVAELKLMS 635
            QAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANP+ ITRGIE+T KALV+ELK MS
Sbjct: 139  QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVSELKXMS 198

Query: 634  KEVEDSELADVAAVSAGNNYEIGNMIADAMSKVGRKGVVTLEEGRSSENTLQVVEGMQFD 455
            KEVEDSELADVAAVSAGNN+E+GNMIA+AMSKVGRKGVVTLEEGRS++N L VVEGMQFD
Sbjct: 199  KEVEDSELADVAAVSAGNNHEVGNMIAEAMSKVGRKGVVTLEEGRSADNFLYVVEGMQFD 258

Query: 454  RGYISPYFVTDSEKMTVEYDNCKLLLVDKKITNARDLVTVLEEAIRGGFPILIIAEDIEQ 275
            RGYISPYFVTDSEKM VEY+NCKLLLVDKKITNARDL+ +LE+AIRGG+P++I+AEDIEQ
Sbjct: 259  RGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEDAIRGGYPVVIMAEDIEQ 318

Query: 274  EALATLVVNRLRGSLKIAALKAPGFGERKSQYLDDIAVLTGGTVIREEVGLSLDSAGSDV 95
            EALATLVVN+LRGSLKIAALKAPGFGERKSQYLDDIA+LTGGTVIREEVGLSLD AG +V
Sbjct: 319  EALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKAGKEV 378

Query: 94   LGHAAKVVLTKDRTTIVGDGSTEDAVNKRV 5
            LG+A+K+VLTKD TTIVGDGST++AV+KRV
Sbjct: 379  LGNASKIVLTKDTTTIVGDGSTQEAVSKRV 408


>ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|118486341|gb|ABK95011.1|
            unknown [Populus trichocarpa] gi|222844875|gb|EEE82422.1|
            predicted protein [Populus trichocarpa]
          Length = 607

 Score =  613 bits (1580), Expect = e-173
 Identities = 315/364 (86%), Positives = 345/364 (94%)
 Frame = -3

Query: 1096 GRREKVVLQKRCSPKVQAMAKELHFNKDGSAIRKLQAGVNKLADLVGVTLGPKGRNVVLE 917
            GR + VVL +  S KV A AKELHFNKDGSAIRKLQ GVNKLADLVGVTLGPKGRNVVLE
Sbjct: 45   GRPQNVVLPRSRSLKVNA-AKELHFNKDGSAIRKLQTGVNKLADLVGVTLGPKGRNVVLE 103

Query: 916  SKYGSPKIVNDGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIT 737
            SKYGSPKIVNDGVTVA+EVELEDPVENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLI 
Sbjct: 104  SKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIA 163

Query: 736  EGVKVVAAGANPIQITRGIERTTKALVAELKLMSKEVEDSELADVAAVSAGNNYEIGNMI 557
            EGVKVVAAGANP+ ITRGIE+TT+ALV ELKLMSKEVEDSELADVAAVSAGNNYE+GNMI
Sbjct: 164  EGVKVVAAGANPVLITRGIEKTTRALVNELKLMSKEVEDSELADVAAVSAGNNYEVGNMI 223

Query: 556  ADAMSKVGRKGVVTLEEGRSSENTLQVVEGMQFDRGYISPYFVTDSEKMTVEYDNCKLLL 377
            A+AMSKVGRKGVVTLEEG+S++N+L VVEGMQFDRGYISPYFVTDSEKM VEYDNCKLLL
Sbjct: 224  AEAMSKVGRKGVVTLEEGKSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEYDNCKLLL 283

Query: 376  VDKKITNARDLVTVLEEAIRGGFPILIIAEDIEQEALATLVVNRLRGSLKIAALKAPGFG 197
            VDKKITNARDL+ +LE+AI+GG+P++I+AEDIEQEALATLVVN+LRG+LKIAALKAPGFG
Sbjct: 284  VDKKITNARDLIAILEDAIKGGYPVVIVAEDIEQEALATLVVNKLRGALKIAALKAPGFG 343

Query: 196  ERKSQYLDDIAVLTGGTVIREEVGLSLDSAGSDVLGHAAKVVLTKDRTTIVGDGSTEDAV 17
            ERKSQYLDDIA+LTGGTV+REEVGL+LD  GS+VLGHA+KVVLTKD TTIV DGST++AV
Sbjct: 344  ERKSQYLDDIAILTGGTVVREEVGLALDKVGSEVLGHASKVVLTKDTTTIVADGSTQEAV 403

Query: 16   NKRV 5
            NKRV
Sbjct: 404  NKRV 407