BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005544
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, c...   312   1e-82
emb|CBI34828.3| unnamed protein product [Vitis vinifera]              308   1e-81
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   308   1e-81
ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ri...   304   3e-80
sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, c...   303   4e-80

>sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
            Flags: Precursor gi|100388|pir||S12109 ribonucleoprotein,
            28K, precursor - common tobacco gi|19750|emb|CAA37880.1|
            unnamed protein product [Nicotiana sylvestris]
          Length = 276

 Score =  312 bits (799), Expect = 1e-82
 Identities = 149/180 (82%), Positives = 170/180 (94%)
 Frame = +3

Query: 546  SEDAKLFVGNLPFDVDSEKLAHLFEQAGIVEIAEVIYNRATDQSRGFGFVTMSAVEEADK 725
            SEDAKLFVGNLP+D+DSE LA LF+QAG+VEIAEVIYNR TD+SRGFGFVTMS VEEADK
Sbjct: 94   SEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADK 153

Query: 726  AVDMLNRYDLNGRLLTVNKAAPRGSRPERAPRVFEPSYRIYVGNLPWDVDDSRLEQIFSE 905
            AV++ ++YDLNGRLLTVNKAAPRGSRPERAPR F+P+YRIYVGN+PWD+DD+RLEQ+FSE
Sbjct: 154  AVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSE 213

Query: 906  HGKVVDARVVYDRESGRSRGFGFVRMSSESDQNDAIANLDGQSLDGRTIRVNVAEERPRR 1085
            HGKVV ARVV+DRESGRSRGFGFV MSSE++ ++AIANLDGQ+LDGRTIRVN AEERPRR
Sbjct: 214  HGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 273


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  308 bits (790), Expect = 1e-81
 Identities = 149/179 (83%), Positives = 166/179 (92%)
 Frame = +3

Query: 549  EDAKLFVGNLPFDVDSEKLAHLFEQAGIVEIAEVIYNRATDQSRGFGFVTMSAVEEADKA 728
            E+AKLFVGNLP+D+DSEKLA LF++AG+VEIAEVIYNR TDQSRGFGF+TMS VEEA+KA
Sbjct: 91   EEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKA 150

Query: 729  VDMLNRYDLNGRLLTVNKAAPRGSRPERAPRVFEPSYRIYVGNLPWDVDDSRLEQIFSEH 908
            V+M NRYDLNGR LTVNKAAPRGSRPER P+ FEPS+RIYVGNLPW VDD+RLEQ+FSEH
Sbjct: 151  VEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEH 210

Query: 909  GKVVDARVVYDRESGRSRGFGFVRMSSESDQNDAIANLDGQSLDGRTIRVNVAEERPRR 1085
            GKVVDARVVYDR++ RSRGFGFV MSSE++ NDAIA LDGQSLDGR IRVNVAEERPRR
Sbjct: 211  GKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRR 269


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
            vinifera]
          Length = 312

 Score =  308 bits (790), Expect = 1e-81
 Identities = 149/179 (83%), Positives = 166/179 (92%)
 Frame = +3

Query: 549  EDAKLFVGNLPFDVDSEKLAHLFEQAGIVEIAEVIYNRATDQSRGFGFVTMSAVEEADKA 728
            E+AKLFVGNLP+D+DSEKLA LF++AG+VEIAEVIYNR TDQSRGFGF+TMS VEEA+KA
Sbjct: 131  EEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKA 190

Query: 729  VDMLNRYDLNGRLLTVNKAAPRGSRPERAPRVFEPSYRIYVGNLPWDVDDSRLEQIFSEH 908
            V+M NRYDLNGR LTVNKAAPRGSRPER P+ FEPS+RIYVGNLPW VDD+RLEQ+FSEH
Sbjct: 191  VEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEH 250

Query: 909  GKVVDARVVYDRESGRSRGFGFVRMSSESDQNDAIANLDGQSLDGRTIRVNVAEERPRR 1085
            GKVVDARVVYDR++ RSRGFGFV MSSE++ NDAIA LDGQSLDGR IRVNVAEERPRR
Sbjct: 251  GKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRR 309


>ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
            gi|223550401|gb|EEF51888.1| ribonucleoprotein,
            chloroplast, putative [Ricinus communis]
          Length = 319

 Score =  304 bits (778), Expect = 3e-80
 Identities = 149/179 (83%), Positives = 167/179 (93%)
 Frame = +3

Query: 549  EDAKLFVGNLPFDVDSEKLAHLFEQAGIVEIAEVIYNRATDQSRGFGFVTMSAVEEADKA 728
            EDAK+FVGNLP+DVDS+KLA LFEQAG VEIAEVIYNR TD SRGFGFV+MS VEEA+KA
Sbjct: 139  EDAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKA 198

Query: 729  VDMLNRYDLNGRLLTVNKAAPRGSRPERAPRVFEPSYRIYVGNLPWDVDDSRLEQIFSEH 908
            V+M +R+DL+GRLLTVNKAAPRGSRPER PRVFEP YRIYVGNLPWDVD++RLEQIFSEH
Sbjct: 199  VEMFHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEH 258

Query: 909  GKVVDARVVYDRESGRSRGFGFVRMSSESDQNDAIANLDGQSLDGRTIRVNVAEERPRR 1085
            GKVVDARVVYDR++GRSRGFGFV MS+E++ NDAIA LDG+SLDGR IRVNVAE+RPRR
Sbjct: 259  GKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGRSLDGRAIRVNVAEQRPRR 317



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 42/97 (43%), Positives = 55/97 (56%)
 Frame = +3

Query: 795  GSRPERAPRVFEPSYRIYVGNLPWDVDDSRLEQIFSEHGKVVDARVVYDRESGRSRGFGF 974
            GS PE A        +I+VGNLP+DVD  +L  +F + G V  A V+Y+RE+  SRGFGF
Sbjct: 127  GSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGF 186

Query: 975  VRMSSESDQNDAIANLDGQSLDGRTIRVNVAEERPRR 1085
            V MS+  +   A+       LDGR + VN A  R  R
Sbjct: 187  VSMSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSR 223


>sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
            Precursor gi|19741|emb|CAA40364.1| 31kD chloroplast
            ribonucleoprotein [Nicotiana sylvestris]
            gi|19756|emb|CAA37885.1| unnamed protein product
            [Nicotiana sylvestris]
          Length = 315

 Score =  303 bits (777), Expect = 4e-80
 Identities = 149/179 (83%), Positives = 164/179 (91%)
 Frame = +3

Query: 549  EDAKLFVGNLPFDVDSEKLAHLFEQAGIVEIAEVIYNRATDQSRGFGFVTMSAVEEADKA 728
            EDAKLFVGNLP+DVDSE LA LFEQAG+VEIAEVIYNR TDQSRGFGFVTMS VEEA+KA
Sbjct: 134  EDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKA 193

Query: 729  VDMLNRYDLNGRLLTVNKAAPRGSRPERAPRVFEPSYRIYVGNLPWDVDDSRLEQIFSEH 908
            V+M NRYD+NGRLLTVNKAA RG RPER PR FE SYRIYVGN+PW +DD+RLEQ+FSEH
Sbjct: 194  VEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEH 253

Query: 909  GKVVDARVVYDRESGRSRGFGFVRMSSESDQNDAIANLDGQSLDGRTIRVNVAEERPRR 1085
            GKVV ARVVYDRE+GRSRGFGFV M+SE++ +DAIANLDGQSLDGRTIRVNVAE+R RR
Sbjct: 254  GKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRR 312