BLASTX nr result

ID: Lithospermum22_contig00005537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005537
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB72814.1| putative 40S ribosomal protein S8-like protein [S...   120   9e-26
ref|NP_001236970.1| uncharacterized protein LOC100500112 [Glycin...   119   2e-25
ref|XP_002299926.1| predicted protein [Populus trichocarpa] gi|1...   119   2e-25
ref|XP_004148331.1| PREDICTED: 40S ribosomal protein S8-like [Cu...   119   3e-25
ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Gl...   119   3e-25

>gb|ABB72814.1| putative 40S ribosomal protein S8-like protein [Solanum tuberosum]
          Length = 221

 Score =  120 bits (302), Expect = 9e-26
 Identities = 73/145 (50%), Positives = 78/145 (53%)
 Frame = +1

Query: 1   VKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVXXXXXXXXXXXXXXX 180
           VKWRALRLDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRT+TLV               
Sbjct: 55  VKWRALRLDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLV--------------- 99

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXNH 360
                                    HYGV+IGR                         NH
Sbjct: 100 -------KSAIVQVDAAPFKQWYLQHYGVEIGR--KKKSAAKKEGEEAAEGAAEEKKSNH 150

Query: 361 VQRKIENRQKDRKIDSHVEEQFASG 435
           VQRK+E RQ+DRKID HVEEQFASG
Sbjct: 151 VQRKLEKRQQDRKIDPHVEEQFASG 175


>ref|NP_001236970.1| uncharacterized protein LOC100500112 [Glycine max]
           gi|255629291|gb|ACU14990.1| unknown [Glycine max]
          Length = 217

 Score =  119 bits (299), Expect = 2e-25
 Identities = 71/145 (48%), Positives = 76/145 (52%)
 Frame = +1

Query: 1   VKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVXXXXXXXXXXXXXXX 180
           VKWRALRLDTGNYSWGSEAVTRKTR LDVVYNASNNELVRT+TLV               
Sbjct: 54  VKWRALRLDTGNYSWGSEAVTRKTRTLDVVYNASNNELVRTQTLV--------------- 98

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXNH 360
                                    HYGV+IGR                         NH
Sbjct: 99  -------KNAIVQVDAAPFKQWYLQHYGVEIGR-KKKVASKKDSTEEGEAAAEETKKSNH 150

Query: 361 VQRKIENRQKDRKIDSHVEEQFASG 435
           VQRK+E RQKDRK+DSH+EEQF  G
Sbjct: 151 VQRKLEKRQKDRKLDSHIEEQFGGG 175


>ref|XP_002299926.1| predicted protein [Populus trichocarpa] gi|118481469|gb|ABK92677.1|
           unknown [Populus trichocarpa]
           gi|222847184|gb|EEE84731.1| predicted protein [Populus
           trichocarpa]
          Length = 220

 Score =  119 bits (299), Expect = 2e-25
 Identities = 69/145 (47%), Positives = 75/145 (51%)
 Frame = +1

Query: 1   VKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVXXXXXXXXXXXXXXX 180
           VKWRALRLDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRT+TLV               
Sbjct: 54  VKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV--------------- 98

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXNH 360
                                    HYGVDIGR                          H
Sbjct: 99  -------KSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAPAAKKEGEDGEAAVEEEKKSKH 151

Query: 361 VQRKIENRQKDRKIDSHVEEQFASG 435
           VQRK+E RQ+ RK+D H+EEQF SG
Sbjct: 152 VQRKLEKRQQTRKLDPHIEEQFGSG 176


>ref|XP_004148331.1| PREDICTED: 40S ribosomal protein S8-like [Cucumis sativus]
           gi|449507060|ref|XP_004162922.1| PREDICTED: 40S
           ribosomal protein S8-like [Cucumis sativus]
          Length = 219

 Score =  119 bits (298), Expect = 3e-25
 Identities = 71/145 (48%), Positives = 77/145 (53%)
 Frame = +1

Query: 1   VKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVXXXXXXXXXXXXXXX 180
           VKWRA RLDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRT+TLV               
Sbjct: 54  VKWRAFRLDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLV--------------- 98

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXNH 360
                                    HYGVDIGR                         NH
Sbjct: 99  -------KSAIVQVDAAPFKQWYLQHYGVDIGR-KKKTSASVKKEEEGDAGTEEVKKSNH 150

Query: 361 VQRKIENRQKDRKIDSHVEEQFASG 435
           VQRKIE RQ+DRK+D H+EEQF+SG
Sbjct: 151 VQRKIEKRQQDRKLDPHIEEQFSSG 175


>ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 220

 Score =  119 bits (298), Expect = 3e-25
 Identities = 71/147 (48%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
 Frame = +1

Query: 1   VKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVXXXXXXXXXXXXXXX 180
           VKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRT+TLV               
Sbjct: 54  VKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLV--------------- 98

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXHYGVDIGR--XXXXXXXXXXXXXXXXXXXXXXXXX 354
                                    HYGV+IGR                           
Sbjct: 99  -------KSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKETAEEGGDAAAAAEEAKKS 151

Query: 355 NHVQRKIENRQKDRKIDSHVEEQFASG 435
           NHVQRK+E RQKDRK+D+H+EEQF  G
Sbjct: 152 NHVQRKLEKRQKDRKLDAHIEEQFGGG 178


Top