BLASTX nr result

ID: Lithospermum22_contig00005493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005493
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   420   e-115
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   400   e-109
ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol...   395   e-107

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  420 bits (1079), Expect = e-115
 Identities = 214/339 (63%), Positives = 254/339 (74%), Gaps = 3/339 (0%)
 Frame = +2

Query: 167  MAYHQQPVIPGTGLSSSSVSGFHY-NSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGD 343
            MAY  QP IPG    SSS SGF + NSPFGDTT+TKVFVGGLAWETQSETMRRYFEQFG+
Sbjct: 1    MAY--QP-IPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGE 57

Query: 344  ILEAVVITDKTTGRSKGYGFVTFRDPDSAKRACGDPTPIIDGRRANCNLASLGRPHPAIP 523
            ILEAVVITDK TGRSKGYGFVTFRDP+SA+RAC DP PIIDGRRANCNLASLGRP P++ 
Sbjct: 58   ILEAVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMS 117

Query: 524  FGRLRSPLPYVRGLPAARGAYLGNFGYQQPLSYMYQQGLMYSPYGHTGYNPD-AYPQGVY 700
            +GRLR   PY+  +PA RG+Y+GNFGYQQP+SY YQQG MY  YG+  Y P+  YPQGVY
Sbjct: 118  YGRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVY 177

Query: 701  NPYGGQQYLPIYGVPGTINTTMHPYSQLGQTVPANPGYPAMQGYGIPSHQILQFGGANVN 880
            NPY GQQYL IYGVPGT+NT ++PY QLGQT+P++ GY  +QGY +P HQ +QFGG++VN
Sbjct: 178  NPYPGQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVN 237

Query: 881  PATPSSVPTIQAPFLTGVAAPVPPQTQFIIPSPS-QFSKGSGSDQNAV*KVDENTLRLQQ 1057
              + S +PTIQAP+ TG+AAPVP Q QFI+P+ S QF +GSG DQ    + DE T+ L+ 
Sbjct: 238  AISTSPIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPDQTTGYEKDE-TVVLRD 296

Query: 1058 D*ELQYCYMSSGLLI*PCK*FILHSRGHTMSSSPEKSIV 1174
                     SSG  I      ++HS  H  S   E  ++
Sbjct: 297  GDSFASSQPSSGFEIIK----VIHSHAHQRSRMSESLLM 331


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  410 bits (1053), Expect = e-112
 Identities = 199/286 (69%), Positives = 228/286 (79%), Gaps = 4/286 (1%)
 Frame = +2

Query: 167  MAYHQQPVIPGTGLSSSSVSGFHY-NSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGD 343
            MAY     IPG    SSS SGF Y NSPFGDTT+TKVFVGGLAWETQSETMRRYFEQFGD
Sbjct: 1    MAYQ---AIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGD 57

Query: 344  ILEAVVITDKTTGRSKGYGFVTFRDPDSAKRACGDPTPIIDGRRANCNLASLGRPHPAIP 523
            ILEAVVITDK TGRSKGYGFVTFR+PD+A+RAC DPTPIIDGRRANCNLASLGRP P +P
Sbjct: 58   ILEAVVITDKNTGRSKGYGFVTFREPDAARRACADPTPIIDGRRANCNLASLGRPRPPLP 117

Query: 524  FGRLRSPLPYVRGLPAARGAYLGNFGYQQPLSYMYQQGLMYSPYGHTGYNPD-AYPQGVY 700
            +GR R   PY+  +   RG Y+G+FGYQQP+SY YQQGLMY+PYG+  Y P+  Y QG Y
Sbjct: 118  YGRPRPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQGAY 177

Query: 701  NPYG-GQQYLPIYGVPGTINTTMHPYSQLGQTVPANPGYPAMQGYGIPSHQILQFGGANV 877
            NPY  G QYL IYGVPGT+N+ M+PY QL Q VP   GY +M GY +P HQI+QFGG +V
Sbjct: 178  NPYATGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSV 237

Query: 878  NPATPSSVPTIQAPFLTGVAAPVPPQTQFIIPSPS-QFSKGSGSDQ 1012
            N  T SS+PTIQAP+ TG+AA VP Q+QFI+P+PS Q+ +GSGSDQ
Sbjct: 238  NAITTSSMPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSDQ 283


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  400 bits (1029), Expect = e-109
 Identities = 198/287 (68%), Positives = 222/287 (77%), Gaps = 5/287 (1%)
 Frame = +2

Query: 167  MAYHQQPVIPGTGLSSSSVSGFHY-NSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGD 343
            MAY     +PG    SSS SGF Y NSPFGDTT+TKVFVGGLAWETQSETMRRYFEQFGD
Sbjct: 1    MAYQ---AVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGD 57

Query: 344  ILEAVVITDKTTGRSKGYGFVTFRDPDSAKRACGDPTPIIDGRRANCNLASLGRPHPAIP 523
            ILEAVVITDK TGRSKGYGFVTFR+P++A+RAC DPTP+IDGRRANCNLASLGRP P  P
Sbjct: 58   ILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPMIDGRRANCNLASLGRPRPPQP 117

Query: 524  F-GRLRSPLPYVRGLPAARGAYLGNFGYQQPLSYMYQQGLMYSPYGHTGYNPD-AYPQGV 697
            + GRLR   PY+  +   RG Y G+FGYQQP+SY YQQGLMY PYG+  Y P+  Y QGV
Sbjct: 118  YVGRLRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQGV 177

Query: 698  YNPY-GGQQYLPIYGVPGTINTTMHPYSQLGQTVPANPGYPAMQGYGIPSHQILQFGGAN 874
            YNPY  GQQYL IYGVPGT+NT M+PY Q GQ VP   GY  MQGY +P H I+QFGG  
Sbjct: 178  YNPYAAGQQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPG 237

Query: 875  VNPATPSSVPTIQAPFLTGVAAPVPPQTQFIIPSPS-QFSKGSGSDQ 1012
            VN  T S +PTIQAP+ TG+AA VP Q QFI+P+PS Q+   SGSDQ
Sbjct: 238  VNAMTTSPLPTIQAPYPTGIAAAVPAQQQFIVPAPSPQYMHSSGSDQ 284


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  400 bits (1028), Expect = e-109
 Identities = 194/288 (67%), Positives = 229/288 (79%), Gaps = 4/288 (1%)
 Frame = +2

Query: 167  MAYHQQPVIPGTGLSSSSVSGFHY-NSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGD 343
            MAY     + G    SSS SGF   NSPFGDTT+TKVFVGGLAWETQSETMRRYF+QFG+
Sbjct: 1    MAYQ---AMQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGE 57

Query: 344  ILEAVVITDKTTGRSKGYGFVTFRDPDSAKRACGDPTPIIDGRRANCNLASLGRPHPAIP 523
            ILEAVVITDK TGRSKGYGFVTFRDP++A+RAC DP+P+IDGRRANCNLASLGRP P +P
Sbjct: 58   ILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLP 117

Query: 524  FGRLRSPLPYVRGLPAARGAYLGNFGYQQPLSYMYQQGLMYSPYGHTGYNPD-AYPQGVY 700
            +GR+R   PYV  L  ARGAY+G FGYQQP+SY YQQGL+Y PYG+T Y P+  YPQ +Y
Sbjct: 118  YGRIRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLY 177

Query: 701  NPYGGQQYLPIYGVPGTIN-TTMHPYSQLGQTVPANPGYPAMQGYGIPSHQILQFGGANV 877
            NPY GQQYL IYGVPG +N TT++PY Q+GQ + +  GY AMQGY +P HQI+ +GG+NV
Sbjct: 178  NPYMGQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNV 237

Query: 878  NPATPSSVPTIQAPFLTGVAAPVPPQTQFIIPSPS-QFSKGSGSDQNA 1018
            N  T S +P IQA + +G+AAPVP Q QFI+P+PS QF +GSG DQ A
Sbjct: 238  NAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPDQTA 285


>ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
            sativus] gi|449531145|ref|XP_004172548.1| PREDICTED:
            RNA-binding protein Musashi homolog 2-like [Cucumis
            sativus]
          Length = 286

 Score =  395 bits (1015), Expect = e-107
 Identities = 197/287 (68%), Positives = 224/287 (78%), Gaps = 3/287 (1%)
 Frame = +2

Query: 167  MAYHQQPVIPGTGLSSSSVSGFHYNSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGDI 346
            MAY   P  P +   SSS SGF  NSPFGDTT+TKVFVGGLAWETQSETMRRYFEQFG+I
Sbjct: 1    MAYQHGPG-PSSISGSSSSSGF-LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 347  LEAVVITDKTTGRSKGYGFVTFRDPDSAKRACGDPTPIIDGRRANCNLASLGRPHPAIPF 526
            LEAVVITDK TGRSKGYGFVTFRDP+SA+RAC DPTPIIDGRRANCNLASLGRP P + +
Sbjct: 59   LEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPLSY 118

Query: 527  --GRLRSPLPYVRGLPAARGAYLGNFGYQQPLSYMYQQGLMYSPYGHTGYNPD-AYPQGV 697
              GRLR P  YV G+   RG Y+GNFGYQQP+SY YQQGL Y PYG+  Y P+  YPQG 
Sbjct: 119  GTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGG 178

Query: 698  YNPYGGQQYLPIYGVPGTINTTMHPYSQLGQTVPANPGYPAMQGYGIPSHQILQFGGANV 877
            YNP+ GQQYL IYGVPG+ + T++ Y QLGQTVP   GY A+ GY +PS QILQF G NV
Sbjct: 179  YNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNV 238

Query: 878  NPATPSSVPTIQAPFLTGVAAPVPPQTQFIIPSPSQFSKGSGSDQNA 1018
            N  T S +PTIQAP+ +G+ APV  Q QF++ SPSQF +GSGSDQ +
Sbjct: 239  NALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTS 285


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