BLASTX nr result
ID: Lithospermum22_contig00005471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00005471
(2350 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig... 97 1e-63
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 96 3e-62
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 94 3e-62
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 91 8e-62
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula] 95 1e-61
>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
Length = 383
Score = 97.1 bits (240), Expect(4) = 1e-63
Identities = 46/103 (44%), Positives = 69/103 (66%)
Frame = +1
Query: 1 FTEQITKYGFAQSHHDHCLFTFNKDRYFLALVVYVDDILITRNSDEEIVLMKKFLHDAFT 180
F++ + K+GF S +D+ LFT+NKD FLAL+VYVDD++IT S I +K ++HD F
Sbjct: 47 FSDALIKFGFTSSLNDYSLFTYNKDGVFLALLVYVDDVIITGTSHSLIQSVKSYIHDLFR 106
Query: 181 IKNLDLAKFFHGIKIARSEKGMHLCQQKYIWDIISDTNMTQAK 309
IK+L ++F G + ARS+ G+ L Q+KY D+IS+ + K
Sbjct: 107 IKDLGQLRYFLGFEAARSDAGLFLNQRKYALDLISEAGLLGCK 149
Score = 86.3 bits (212), Expect(4) = 1e-63
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +3
Query: 360 PFFPDPSQYRRLIGRLLYLNFIRPDMTFLVHHLNQFMQAPYVHHWEATLHIVKYLKGSIT 539
P DP+ YRRL+G+L+YL RPD+ + VH L+QFM P H A +++YLKG
Sbjct: 167 PLLEDPAPYRRLVGQLIYLTNTRPDLAYSVHILSQFMNKPTEDHLAAAHRVLRYLKGCPA 226
Query: 540 HGLSYPTNTGCQLEA*CHANWAKCP 614
G+ YP+N QL C A+W CP
Sbjct: 227 QGVFYPSNQTLQLSVFCDADWGSCP 251
Score = 82.4 bits (202), Expect(4) = 1e-63
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 727 SVASVVCELKWMHYILIDIK-QVVFPIPVRCDNQSALHIIQNPIFYKRTKHIGLDCHLIR 903
++A CE+ W+ +L D++ QV P+ + CDN +A+HI +NP+F++RTKH+ LD H++R
Sbjct: 290 AMAHACCEVSWLTRLLADLQVQVPTPVALFCDNMAAMHIARNPVFHERTKHVELDRHVVR 349
Query: 904 DSFKEGFIDPMSISSKLQLANLFTKVLQA 990
GFI P ++S Q A+L TK L A
Sbjct: 350 QHLTSGFISPHFVASIDQPADLLTKALSA 378
Score = 48.5 bits (114), Expect(4) = 1e-63
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 602 G*VPFTRSSVTGYGIFYGNTLVSWKSKKQNTISRSSAEAKY 724
G P TR SV+G + G +++SWK+KKQ +SRSSAEA+Y
Sbjct: 248 GSCPLTRRSVSGCCVLLGQSVISWKTKKQAIVSRSSAEAEY 288
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 96.3 bits (238), Expect(4) = 3e-62
Identities = 44/100 (44%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +1
Query: 727 SVASVVCELKWMHYILIDIK-QVVFPIPVRCDNQSALHIIQNPIFYKRTKHIGLDCHLIR 903
++AS+ CEL W+ Y+L D+K + P + CD+++ALHI NP++++RTKHI +DCH++R
Sbjct: 1354 AMASITCELTWLRYLLDDLKVEHSQPAKLFCDSKAALHIAANPVYHERTKHIEIDCHVVR 1413
Query: 904 DSFKEGFIDPMSISSKLQLANLFTKVLQALVFRDLLFKIG 1023
+ + G I + S QLA+LFTK L + +F LL K G
Sbjct: 1414 ERIQSGAIVTAHVPSSCQLADLFTKPLNSSIFHSLLSKFG 1453
Score = 82.4 bits (202), Expect(4) = 3e-62
Identities = 42/107 (39%), Positives = 64/107 (59%)
Frame = +1
Query: 1 FTEQITKYGFAQSHHDHCLFTFNKDRYFLALVVYVDDILITRNSDEEIVLMKKFLHDAFT 180
F+ I + GF QS D+ LFT F A+++YVDD++IT N + I +K+ LH F
Sbjct: 1111 FSATIQQDGFHQSRADYSLFTKISGNSFTAVLIYVDDMIITGNDENVIAALKESLHTKFR 1170
Query: 181 IKNLDLAKFFHGIKIARSEKGMHLCQQKYIWDIISDTNMTQAKVAET 321
IK+L ++F GI++ARS G+ + Q+KY DI+ + + AK T
Sbjct: 1171 IKDLGQLRYFLGIEVARSTDGISISQRKYTLDILDEAGLLGAKPLST 1217
Score = 81.6 bits (200), Expect(4) = 3e-62
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = +3
Query: 372 DPSQYRRLIGRLLYLNFIRPDMTFLVHHLNQFMQAPYVHHWEATLHIVKYLKGSITHGLS 551
+PS YRRL+G+L+YL RP++++ VH L+QFMQ P H A H+++YLKG+ GL
Sbjct: 1235 NPSTYRRLVGQLIYLTITRPEISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGLY 1294
Query: 552 YPTNTGCQLEA*CHANWAKC 611
+P L C A+WA+C
Sbjct: 1295 FPAKGNLLLRGFCDADWARC 1314
Score = 49.3 bits (116), Expect(4) = 3e-62
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +2
Query: 617 TRSSVTGYGIFYGNTLVSWKSKKQNTISRSSAEAKY 724
TR SVTGY IF +SWK+KKQ T+SRSS E++Y
Sbjct: 1317 TRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEY 1352
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 93.6 bits (231), Expect(4) = 3e-62
Identities = 42/96 (43%), Positives = 66/96 (68%)
Frame = +1
Query: 22 YGFAQSHHDHCLFTFNKDRYFLALVVYVDDILITRNSDEEIVLMKKFLHDAFTIKNLDLA 201
YGF QS+ ++ LFT+ K + ++VYVDD++I+RN + K +L+D F +K+L +
Sbjct: 1118 YGFLQSYSNYSLFTYTKGNVQINVLVYVDDLIISRNDSAALKTFKAYLNDCFKMKDLGVL 1177
Query: 202 KFFHGIKIARSEKGMHLCQQKYIWDIISDTNMTQAK 309
K+F GI++ARS G+ LCQ+KY DI+S+T + AK
Sbjct: 1178 KYFLGIEVARSSAGLFLCQRKYTLDIVSETGLLGAK 1213
Score = 92.4 bits (228), Expect(4) = 3e-62
Identities = 48/109 (44%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
Frame = +1
Query: 727 SVASVVCELKWMHYILIDIKQVVFPIPVR--CDNQSALHIIQNPIFYKRTKHIGLDCHLI 900
++A+V CELKW+ +L+ + V P ++ CD+QSALH+ +NP+F++RTKHI +DCH I
Sbjct: 1343 AMAAVTCELKWLKGLLLSLG-VHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFI 1401
Query: 901 RDSFKEGFIDPMSISSKLQLANLFTKVLQALVFRDLLFKIG-FVPNPPS 1044
RD+ +G I + + QLA++FTK L+ F LL K+G F P+ P+
Sbjct: 1402 RDAITDGLIALSYVPTVTQLADIFTKALRKKQFDYLLAKLGIFEPHAPT 1450
Score = 89.4 bits (220), Expect(4) = 3e-62
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = +3
Query: 372 DPSQYRRLIGRLLYLNFIRPDMTFLVHHLNQFMQAPYVHHWEATLHIVKYLKGSITHGLS 551
+P YRRL+GRL+YL RPD+ + VH ++QFMQ P + HWEA L +V+YLKG+ G+
Sbjct: 1235 NPESYRRLVGRLIYLAVTRPDLAYSVHIISQFMQEPRIEHWEAALRVVRYLKGTPGQGVL 1294
Query: 552 YPTNTGCQLEA*CHANWAKCP 614
++ L+ C ++WA CP
Sbjct: 1295 LRADSDLSLQGWCDSDWAACP 1315
Score = 34.3 bits (77), Expect(4) = 3e-62
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 611 PFTRSSVTGYGIFYGNTLVSWKSKKQNTISRSSAEAKY 724
P TR S++G W +KKQ+T+SRSSAEA+Y
Sbjct: 1315 PVTRRSLSG-----------WLTKKQHTVSRSSAEAEY 1341
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 91.3 bits (225), Expect(4) = 8e-62
Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Frame = +1
Query: 727 SVASVVCELKWMHYILIDIK-QVVFPIPVRCDNQSALHIIQNPIFYKRTKHIGLDCHLIR 903
S+A+ CE+ W+ +L D+ + + CDNQ+A+HI NP+F++RTKHI +DCH++R
Sbjct: 1371 SMATTCCEITWLRSLLADLNVNHAHAVKLFCDNQAAIHIASNPVFHERTKHIEMDCHVVR 1430
Query: 904 DSFKEGFIDPMSISSKLQLANLFTKVLQALVFRDLLFKIGFV 1029
+ + G + M I ++ Q A+LFTK L + F LL K+G +
Sbjct: 1431 EKVQRGLVKTMHIRTQEQPADLFTKPLSSKQFSTLLSKLGVI 1472
Score = 81.3 bits (199), Expect(4) = 8e-62
Identities = 39/95 (41%), Positives = 61/95 (64%)
Frame = +1
Query: 25 GFAQSHHDHCLFTFNKDRYFLALVVYVDDILITRNSDEEIVLMKKFLHDAFTIKNLDLAK 204
GF QS D+ LF N F L+VYVDD+++ NS E+I+ K+FL F +K++ +
Sbjct: 1136 GFKQSWSDYSLFXRNTQGRFTTLLVYVDDVILAGNSLEDIIETKQFLASHFKLKDMGQLR 1195
Query: 205 FFHGIKIARSEKGMHLCQQKYIWDIISDTNMTQAK 309
+F GI++ARS++G+ LCQ+KY +++ D AK
Sbjct: 1196 YFLGIEVARSKQGIVLCQRKYALELLEDAGFLGAK 1230
Score = 79.0 bits (193), Expect(4) = 8e-62
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +3
Query: 372 DPSQYRRLIGRLLYLNFIRPDMTFLVHHLNQFMQAPYVHHWEATLHIVKYLKGSITHGLS 551
D SQYRRL+GRL+YL RPD+ + VH L+QFM P H +A +++Y+K + G+
Sbjct: 1252 DASQYRRLVGRLIYLTITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIF 1311
Query: 552 YPTNTGCQLEA*CHANWAKC 611
P+ +L A C A+WA+C
Sbjct: 1312 LPSTGQLELTAYCDADWARC 1331
Score = 56.6 bits (135), Expect(4) = 8e-62
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 617 TRSSVTGYGIFYGNTLVSWKSKKQNTISRSSAEAKY 724
TR S TGY IF+GN +SWK+KKQ T+SRSSAEA+Y
Sbjct: 1334 TRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEY 1369
>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
Length = 635
Score = 94.7 bits (234), Expect(4) = 1e-61
Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Frame = +1
Query: 727 SVASVVCELKWMHYILIDIKQVVFPIPVR-CDNQSALHIIQNPIFYKRTKHIGLDCHLIR 903
++AS CE++W+ Y+L D++ +PV CDNQSA+HI NP+F++RTKH+ +DCH++R
Sbjct: 502 AMASATCEMQWLLYLLRDLQVQCVQLPVLYCDNQSAMHIASNPVFHERTKHLEIDCHIVR 561
Query: 904 DSFKEGFIDPMSISSKLQLANLFTKVLQALVFRDLLFKIGF--VPNPPS*GG 1053
+ + G + +++ Q+ + FTK L F LL K+G + +PP+ GG
Sbjct: 562 EKLQAGIFKLLPVTTHDQIGDSFTKALYLQPFSLLLSKLGMLDIYHPPTCGG 613
Score = 88.2 bits (217), Expect(4) = 1e-61
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +3
Query: 366 FPDPSQYRRLIGRLLYLNFIRPDMTFLVHHLNQFMQAPYVHHWEATLHIVKYLKGSITHG 545
FPD S YRRLIGRL+YLN RPD+TF+ L+QF+ P H+ ATL ++KYLKGS G
Sbjct: 381 FPDISAYRRLIGRLIYLNTTRPDITFITQQLSQFLSKPTQTHYHATLRVLKYLKGSPGKG 440
Query: 546 LSYPTNTGCQLEA*CHANWAKC 611
+ +P +G ++ A+W C
Sbjct: 441 IFFPRASGLHIQGYTDADWVGC 462
Score = 79.0 bits (193), Expect(4) = 1e-61
Identities = 38/98 (38%), Positives = 60/98 (61%)
Frame = +1
Query: 28 FAQSHHDHCLFTFNKDRYFLALVVYVDDILITRNSDEEIVLMKKFLHDAFTIKNLDLAKF 207
+ Q+ D LFT F ++VYVDDI++ NS E ++K LH AF IK+L + K+
Sbjct: 268 YKQAASDASLFTKLTSETFTIILVYVDDIILAGNSLTEFHIIKNALHQAFKIKDLGILKY 327
Query: 208 FHGIKIARSEKGMHLCQQKYIWDIISDTNMTQAKVAET 321
F G+++A S G+ LCQ+KY D+++D+ + +K T
Sbjct: 328 FLGLEVAHSHSGISLCQRKYCLDLLNDSGLLGSKPVST 365
Score = 45.8 bits (107), Expect(4) = 1e-61
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +2
Query: 617 TRSSVTGYGIFYGNTLVSWKSKKQNTISRSSAEAKY 724
TR S++G+ F G +L+ W++KKQ T+S+SS+EA+Y
Sbjct: 465 TRRSISGHCFFLGQSLICWRTKKQPTVSKSSSEAEY 500