BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005456
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   288   1e-75
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ...   288   2e-75
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              286   6e-75
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   286   6e-75
gb|AFK43162.1| unknown [Medicago truncatula]                          285   8e-75

>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  288 bits (737), Expect = 1e-75
 Identities = 144/217 (66%), Positives = 172/217 (79%)
 Frame = -1

Query: 883 EVNGASECKSDSVDNGSSESHKYYLSRKTILEMLKDRGYAVPSSDIQMSLKDFRDKYGPK 704
           E   A  C S  VDNGS ESH+YYLSR+T LEMLKDRGY++PS +I +SL DFRD +G  
Sbjct: 21  EAEQAKGCLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQF 80

Query: 703 PDSDALKISALHKNNPSDRILVIFLGQHMVKVNSVRVIAAQIMNKETLNRLILIVENKMT 524
           PD D L++S  H  N S RILVIF G  +VKV ++R  A QI+N++TL  LILIVEN +T
Sbjct: 81  PDPDRLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHIT 140

Query: 523 SQAQKALLAFSFKVETFNILDLLVNITKHALKPKHRVLTDKEKQALLKKFDVEEKQLPRM 344
           SQA KA+  FSFKVE F I DLLVNITKH LKPKH+VLTDK+K  LLKK+++EEKQLPRM
Sbjct: 141 SQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLPRM 200

Query: 343 LQNDAISRYYGLEKGQVLEVTYNGEVTGLHVTYRCVW 233
           LQ DAI+RYYGLE+GQV++VTY+GEVT +HVTYRCVW
Sbjct: 201 LQTDAIARYYGLERGQVVKVTYSGEVTQMHVTYRCVW 237


>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
           polymerase subunit, RPB5; RNA polymerase Rpb5,
           N-terminal [Medicago truncatula]
           gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
           I, II, and III subunit RPABC1 [Medicago truncatula]
          Length = 248

 Score =  288 bits (736), Expect = 2e-75
 Identities = 138/211 (65%), Positives = 172/211 (81%)
 Frame = -1

Query: 865 ECKSDSVDNGSSESHKYYLSRKTILEMLKDRGYAVPSSDIQMSLKDFRDKYGPKPDSDAL 686
           +C     DNGS ESH+YYLSR+T+LEMLKDRGY++PS +IQ+SL DFR  +G  PD D L
Sbjct: 38  QCLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRL 97

Query: 685 KISALHKNNPSDRILVIFLGQHMVKVNSVRVIAAQIMNKETLNRLILIVENKMTSQAQKA 506
           +++A H  NPS RILV+F G  +VKVN VR IA QI+N+E+L  LILIV+N++TSQA KA
Sbjct: 98  RLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKA 157

Query: 505 LLAFSFKVETFNILDLLVNITKHALKPKHRVLTDKEKQALLKKFDVEEKQLPRMLQNDAI 326
           +   SFKVE F I DLLVN TKH LKPKH+VLTDK+K+ LLKK+D++EKQLPRMLQ DAI
Sbjct: 158 VNLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAI 217

Query: 325 SRYYGLEKGQVLEVTYNGEVTGLHVTYRCVW 233
           +RYYGL++GQV++VTY GE+T +HVTYRCVW
Sbjct: 218 ARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  286 bits (731), Expect = 6e-75
 Identities = 140/220 (63%), Positives = 178/220 (80%), Gaps = 3/220 (1%)
 Frame = -1

Query: 883 EVNGASE---CKSDSVDNGSSESHKYYLSRKTILEMLKDRGYAVPSSDIQMSLKDFRDKY 713
           ++NG  E   C S  VD G  ESH+YYL+R+T+LEML+DRGY++P+ DI +SL+DFR  Y
Sbjct: 111 DLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFY 170

Query: 712 GPKPDSDALKISALHKNNPSDRILVIFLGQHMVKVNSVRVIAAQIMNKETLNRLILIVEN 533
             KPD D L+ISA  +++PS +ILVIF G  +VKVN++R IA QI+NK++L++LIL+++N
Sbjct: 171 SQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQN 230

Query: 532 KMTSQAQKALLAFSFKVETFNILDLLVNITKHALKPKHRVLTDKEKQALLKKFDVEEKQL 353
            +TSQA KA+  FSF+VE F I DLLVNITKH LKPKHRVLTD+EK  LLKK+ + EKQL
Sbjct: 231 HITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQL 290

Query: 352 PRMLQNDAISRYYGLEKGQVLEVTYNGEVTGLHVTYRCVW 233
           PRMLQ DAI+RYYGLEKGQV++V YNGE+TG HVTYRCVW
Sbjct: 291 PRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 330


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  286 bits (731), Expect = 6e-75
 Identities = 140/220 (63%), Positives = 178/220 (80%), Gaps = 3/220 (1%)
 Frame = -1

Query: 883 EVNGASE---CKSDSVDNGSSESHKYYLSRKTILEMLKDRGYAVPSSDIQMSLKDFRDKY 713
           ++NG  E   C S  VD G  ESH+YYL+R+T+LEML+DRGY++P+ DI +SL+DFR  Y
Sbjct: 10  DLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFY 69

Query: 712 GPKPDSDALKISALHKNNPSDRILVIFLGQHMVKVNSVRVIAAQIMNKETLNRLILIVEN 533
             KPD D L+ISA  +++PS +ILVIF G  +VKVN++R IA QI+NK++L++LIL+++N
Sbjct: 70  SQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQN 129

Query: 532 KMTSQAQKALLAFSFKVETFNILDLLVNITKHALKPKHRVLTDKEKQALLKKFDVEEKQL 353
            +TSQA KA+  FSF+VE F I DLLVNITKH LKPKHRVLTD+EK  LLKK+ + EKQL
Sbjct: 130 HITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQL 189

Query: 352 PRMLQNDAISRYYGLEKGQVLEVTYNGEVTGLHVTYRCVW 233
           PRMLQ DAI+RYYGLEKGQV++V YNGE+TG HVTYRCVW
Sbjct: 190 PRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229


>gb|AFK43162.1| unknown [Medicago truncatula]
          Length = 248

 Score =  285 bits (730), Expect = 8e-75
 Identities = 137/211 (64%), Positives = 171/211 (81%)
 Frame = -1

Query: 865 ECKSDSVDNGSSESHKYYLSRKTILEMLKDRGYAVPSSDIQMSLKDFRDKYGPKPDSDAL 686
           +C     DNGS ESH+YYLSR+T+LEMLKDRGY++PS +IQ+SL DFR  +G  PD D L
Sbjct: 38  QCLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRL 97

Query: 685 KISALHKNNPSDRILVIFLGQHMVKVNSVRVIAAQIMNKETLNRLILIVENKMTSQAQKA 506
           +++A H  NPS RILV+F G  +VKVN VR IA QI+N+E+L  LILIV+N++TSQA KA
Sbjct: 98  RLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKA 157

Query: 505 LLAFSFKVETFNILDLLVNITKHALKPKHRVLTDKEKQALLKKFDVEEKQLPRMLQNDAI 326
           +   SFKVE   I DLLVN TKH LKPKH+VLTDK+K+ LLKK+D++EKQLPRMLQ DAI
Sbjct: 158 VNLLSFKVEILQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAI 217

Query: 325 SRYYGLEKGQVLEVTYNGEVTGLHVTYRCVW 233
           +RYYGL++GQV++VTY GE+T +HVTYRCVW
Sbjct: 218 ARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248