BLASTX nr result
ID: Lithospermum22_contig00005415
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00005415
(3161 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23686.3| unnamed protein product [Vitis vinifera] 284 e-146
gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides] 261 e-129
gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indi... 229 2e-96
gb|ABF93875.1| RNA recognition motif family protein, expressed [... 227 1e-95
gb|ABF93874.1| RNA recognition motif family protein, expressed [... 222 2e-94
>emb|CBI23686.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 284 bits (727), Expect(2) = e-146
Identities = 181/404 (44%), Positives = 240/404 (59%), Gaps = 12/404 (2%)
Frame = -3
Query: 1437 TGDMEKSVELANSISDTVVDSPNKIFVGGISKIISSEMVKEIAQVFGPLKAYHFEVNADT 1258
TG EK V ++ISD V DSP+KIF+GGIS+ +SS+M+ EIA FGPLKAY F+VN D
Sbjct: 491 TGVQEKLVAAPDAISDIVKDSPHKIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNEDL 550
Query: 1257 KKSYAFLEYVDHSVTHKACAALNGMKLGGQILTVVQTILDDAEVANAECQPFYGIPEHAK 1078
+ AFLEYVD SVT KACA LNGMKLGGQ+LTVVQ I + + N PFYGIPEHAK
Sbjct: 551 GEPCAFLEYVDQSVTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAK 610
Query: 1077 PLLQQPTQVLKLKNVFNLEGLVSLSEAEVNEVLEDTRIECSRFGTVKSVNYVKHSNNTNI 898
PLL++PTQVLKLKNV N + L SLSEAE+ E+LED R+EC+RFGTVKSVN VK+ NN+++
Sbjct: 611 PLLERPTQVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNIVKY-NNSHV 669
Query: 897 SQETNLMDIGSAEGHSVEKSESDPNKLAQADEL----ELQCCDEDLVVNKISE------- 751
S +++ A ++ D N + +A+ L + DE + N IS+
Sbjct: 670 S----TLEVYEAADNTGSNLGCDGNSM-KAETLGGGTDNGSIDEVVERNSISDDKSLTDL 724
Query: 750 FGNSVAKPSNPDISSNHSEPKGSANYVVSDSHTAELADEMNDGTHDTSNR-DAPGPSSPE 574
N + +PS+ D ++ EP SD L D++N+ H+ R D E
Sbjct: 725 IKNELCEPSHIDSNTAVKEPGCPDG---SDDIPRGLPDQLNNMKHEVELRNDKAADVIQE 781
Query: 573 NCGETAVNPTMEDHEIRKXXXXXXXXXXXXXXXXXXXEFDGLDKDEDNEMISGLEGVFEP 394
+ T+E+ RK D K++ + + L+ +FE
Sbjct: 782 DFIIKNKLMTVEEETNRKLLGTSAELDSSPGIKS-----DFTGKNDSEKGLCDLDDMFEV 836
Query: 393 GCVLVEFKREEASCDAAHSLHGRLFENRVVTVEFVDLDVYRRRF 262
GCVLVE+ R EASC AAH LHGR F++RVV V +V LD+YR +F
Sbjct: 837 GCVLVEYGRTEASCMAAHCLHGRYFDDRVVVVGYVALDLYRMKF 880
Score = 264 bits (675), Expect(2) = e-146
Identities = 186/539 (34%), Positives = 270/539 (50%), Gaps = 5/539 (0%)
Frame = -1
Query: 3095 DLFDDETSARTRPLSFDEVMLRRNNRKETAGDDIGSDEAHGLSKRHDVEVASK--PAERK 2922
D F + T+ARTRP SFDE+MLRR N+K G+ E +S++ V+ S +++
Sbjct: 51 DNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGNISRKDIVKNVSDCYESDKG 110
Query: 2921 TATHIDSIPSGMSRALEESQRLKTSKKEHASCQEDRLVRNAVDDRNKTGPARVTLRSKIV 2742
+ DS P ++ + E+ ++ + KK+ + ++ + N D + ++ +
Sbjct: 111 YKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGNVKDKESHNSEDKLKAKPNKG 170
Query: 2741 SNGKTLEGKNDRYTHIDKAKDEYXXXXXXXXXXXRHSETSVQKHRSGGRISGKYEEHKSH 2562
K+ EGK ++ H GR K + +S
Sbjct: 171 MTDKSKEGKINQRVH--------------------------------GR---KKIDERSR 195
Query: 2561 NQAGENDERLQNRRXXXXXXXXXLEHMSQKRDSIDLTGADIYVDKSRVKSEKETRRKHHI 2382
+ +++ +K+ S D G D Y D+SR KSEKE++RKH
Sbjct: 196 RSSDDSESE------------------PEKKFSRDSVGKDRYADRSR-KSEKESKRKHRT 236
Query: 2381 DE-ERVREAQRSMKHDAGKRKYTDSSERKERVSAXXXXXXXXXXXXXXXXXXXDIVGRHS 2205
E E+ RE KHD GKR ++ +RKER R S
Sbjct: 237 GEDEKNRERNSMKKHDPGKRHESEFLDRKER--------------------------RES 270
Query: 2204 SQNTHKGSSHYRNSAVHSPKDMPGGLHTDTEKASTDGTNXXXXXXXXXXXXXXGYSPRKR 2025
+ + S RN + S +G++ GYSPRKR
Sbjct: 271 PPSRRQHSDADRN------------------RISNNGSSSHFRRHGGSASGLGGYSPRKR 312
Query: 2024 KSDSATRTPSPLRRSPETRTIGWDLNPTVNGRSSTGGLVPSHSEPSSNQDLPYIISATLA 1845
++++A +TPSP RSPE ++ GWDL P+ + G ++ S+ PS+ +P + T
Sbjct: 313 RTEAAIKTPSPTNRSPEKKSAGWDLPPSRTDGMNAGSVL-SNELPSA---VPVAVPVTAT 368
Query: 1844 TAKPAIGIL--DHTRPLNVGAVDSIQLTQATRPMRRLYVENLPGSASEKAVMEWINSSLL 1671
TAKP + + D ++DSIQLTQATRPMRRLYVENLP S+SEKA+ME +N+ LL
Sbjct: 369 TAKPPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLL 428
Query: 1670 FSGVNHIQGTQPCISCVMNKEKGQALLEFLTPEVASIAISLDGRSFSGSILKLRRPKDF 1494
SG+NH+QGT PCISC+++KEKGQAL+EFLTPE AS A+S DG SFSGSILK+RRPKDF
Sbjct: 429 SSGINHVQGTPPCISCIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPKDF 487
>gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 787
Score = 261 bits (666), Expect(2) = e-129
Identities = 156/405 (38%), Positives = 224/405 (55%), Gaps = 13/405 (3%)
Frame = -3
Query: 1437 TGDMEKSVELANSISDTVVDSPNKIFVGGISKIISSEMVKEIAQVFGPLKAYHFEVNADT 1258
TG++EKS ++I D V DSP+KIF+GGISK++SS+M+ EIA FGPLKAY FE D
Sbjct: 384 TGELEKSAAAIDAIGDIVKDSPHKIFIGGISKVLSSKMLMEIASAFGPLKAYQFENRKDP 443
Query: 1257 KKSYAFLEYVDHSVTHKACAALNGMKLGGQILTVVQTILDDAEVANAECQPFYGIPEHAK 1078
+ +AFLEY D SVT KACA LNGMKLGGQ++T +Q + + + + F I +HAK
Sbjct: 444 DEPFAFLEYADESVTFKACAGLNGMKLGGQVITAIQAVPNASSSGSDGNSQFGQISQHAK 503
Query: 1077 PLLQQPTQVLKLKNVFNLEGLVSLSEAEVNEVLEDTRIECSRFGTVKSVNYVKHSN---N 907
LL++PT+VLKLKNVF+ E L SLS EV EVLED R+EC+RFG+VKS+N +K++ +
Sbjct: 504 ALLEKPTEVLKLKNVFDSESLSSLSNTEVEEVLEDVRLECARFGSVKSINVIKYAAITIS 563
Query: 906 TNISQETNLMDIGSAEGHSVEKSESDP----------NKLAQADELELQCCDEDLVVNKI 757
T+ S E N + + S+ ++P K + + + D++ ++
Sbjct: 564 TSKSCEFNDDTVSAEATQSLGCDGTNPKTRNIRGSIDQKFMEGNSIGDDKPASDVMEDEP 623
Query: 756 SEFGNSVAKPSNPDISSNHSEPKGSANYVVSDSHTAELADEMNDGTHDTSNRDAPGPSSP 577
+ G + + D++ S VSDS+ ++ D++ D N+ G
Sbjct: 624 CQPGQVDSDMAVQDLACKSSSDSQEPPQDVSDSNVDKVTDDIEIEEVDAENKSTAGEDL- 682
Query: 576 ENCGETAVNPTMEDHEIRKXXXXXXXXXXXXXXXXXXXEFDGLDKDEDNEMISGLEGVFE 397
N E N M E+ + ++K + E L +FE
Sbjct: 683 -NLKEVGDNKLMAGEELNLEEVSGDVEKAFVNDSMEMKP-NSIEKGDCKEQDCSLGLIFE 740
Query: 396 PGCVLVEFKREEASCDAAHSLHGRLFENRVVTVEFVDLDVYRRRF 262
GCV VEF+R E +C AAH LHGRLF++R V VE+V LD+Y RF
Sbjct: 741 RGCVFVEFRRTEGACMAAHCLHGRLFDDRAVVVEYVPLDIYLARF 785
Score = 229 bits (584), Expect(2) = e-129
Identities = 146/372 (39%), Positives = 211/372 (56%), Gaps = 17/372 (4%)
Frame = -1
Query: 2549 ENDERLQNRRXXXXXXXXXLEHMSQKRDSIDLTGADIYVDKSRVKSEKETRRKHHID-EE 2373
+ +E++ +RR E + K+ S ++ D +VDKSR KSE+E + K+ ++
Sbjct: 12 KTNEKIHDRRKGDKRPSNISESEAVKKHSREVQ-KDRHVDKSRGKSERERKEKYRNGIDD 70
Query: 2372 RVREAQRSMKHDAGKRKYTDSSERKERV-SAXXXXXXXXXXXXXXXXXXXDIVGRHS--- 2205
+ R+ + KHD GK + ++SERKER S+ + R S
Sbjct: 71 KSRDRNAAKKHDLGKGHHLETSERKERKESSKSHHEELRLKRRRSRSREHEDRNRRSISL 130
Query: 2204 SQNTHKGSSHYRNSAV----HSPKDMPGGLHTDTE--KASTDGTNXXXXXXXXXXXXXXG 2043
S HK S+++ V HS K+ G +D E + + ++ G
Sbjct: 131 SPRAHKRGSYHKREHVELSLHSVKERSGRQQSDAENNQLANSSSSRHQRRHGGFASGLGG 190
Query: 2042 YSPRKRKSDSATRTPSPLRRSPETRTIGWDLNPTVNGRSSTGGLVPSHSEPS--SNQDLP 1869
YSPRKRK+++A +TPSP +RSPE ++ WDL P ++ + P+ ++ ++
Sbjct: 191 YSPRKRKTEAAVKTPSPAKRSPEKKSAKWDLAPEETNNVFPAVILSNFQSPNQTASSNIH 250
Query: 1868 YIISAT---LATAKPAIGI-LDHTRPLNVGAVDSIQLTQATRPMRRLYVENLPGSASEKA 1701
++SA A KP G+ L + +SIQLTQAT P+RRLY+EN+P SASEKA
Sbjct: 251 EVVSAVPVVSAPMKPPSGVSLSSLSTATKVSTESIQLTQATHPIRRLYMENIPASASEKA 310
Query: 1700 VMEWINSSLLFSGVNHIQGTQPCISCVMNKEKGQALLEFLTPEVASIAISLDGRSFSGSI 1521
VM+ +N+ L+ SGV+HIQGTQPCISC+ KEKGQAL+EFLTPE AS A+S DGRSFSGSI
Sbjct: 311 VMDCLNNFLISSGVHHIQGTQPCISCIRQKEKGQALVEFLTPEDASAALSFDGRSFSGSI 370
Query: 1520 LKLRRPKDFSHV 1485
+K+RRPKDF V
Sbjct: 371 IKVRRPKDFIEV 382
>gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
Length = 1128
Score = 229 bits (585), Expect(2) = 2e-96
Identities = 157/414 (37%), Positives = 218/414 (52%), Gaps = 25/414 (6%)
Frame = -3
Query: 1425 EKSVELANSISDTVVDSPNKIFVGGISKIISSEMVKEIAQVFGPLKAYHFEVNADTKKSY 1246
+K E ISD V DSP+KIF+ GIS +ISSEM+ EI FGPL AY F N D +
Sbjct: 732 KKPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEDLGGAC 791
Query: 1245 AFLEYVDHSVTHKACAALNGMKLGGQILTVVQTILDDAEVANAECQPFYGIPEHAKPLLQ 1066
AFLEY+DHS+T KACA LNGMKLGG ILT V + E A E PFYGIP+ AK LL+
Sbjct: 792 AFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLE 851
Query: 1065 QPTQVLKLKNVFNLEGLVSLSEAEVNEVLEDTRIECSRFGTVKSVNYVKH---SNNTNIS 895
+PT+VL+LKNVF+ E + LS++E+ E+LED R+EC+RFG VKS+N V++ S+NT
Sbjct: 852 EPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVEYPASSDNTTGD 911
Query: 894 QETNLMDIGSAEGHSVEKSESDPNKLAQADELELQCCDEDLVVNKISEFGN-SVAKPSNP 718
T D GS + +E E N E ++C V+N+ ++ + S+ + +P
Sbjct: 912 TITECED-GSTK---IEPKEYGGN--VSCTETGVECS----VLNQSTDVPDPSICEVQDP 961
Query: 717 DISSNHSEPKGSANY-----------VVSDSHT--------AELADEMND--GTHDTSNR 601
S PKG + D +T + D +D GT + +
Sbjct: 962 VELDTDSIPKGRDHKNLDTRGECDAPTAGDENTDQGVEADQTDSTDAQDDARGTIERGHA 1021
Query: 600 DAPGPSSPENCGETAVNPTMEDHEIRKXXXXXXXXXXXXXXXXXXXEFDGLDKDEDNEMI 421
DA S +C T K + +D DN +
Sbjct: 1022 DADQASLETSCS------TAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDA-RDNALA 1074
Query: 420 SGLEGVFEPGCVLVEFKREEASCDAAHSLHGRLFENRVVTVEFVDLDVYRRRFS 259
S + E GC+LVEF R+EA+C AAHSLHGR F +R+V+ + D+Y ++++
Sbjct: 1075 SNTSAL-EAGCILVEFLRKEAACTAAHSLHGRRFGSRIVSAGYAPHDLYLQKYT 1127
Score = 152 bits (384), Expect(2) = 2e-96
Identities = 161/569 (28%), Positives = 247/569 (43%), Gaps = 39/569 (6%)
Frame = -1
Query: 3083 DETSARTRPLSFDEVMLRRNNRKETAGDDIGSDEAHGLSKRHDVEVASKPAERKTATHID 2904
D T+ARTRPLS ++M RR K+TA + + E GL + + + + H++
Sbjct: 181 DGTAARTRPLSIQDIMSRRE--KKTASEAKKTKE--GLEENSNGK----------SNHLE 226
Query: 2903 SIPSGMSRALEESQRLKTSKKEHAS-----CQEDRLVRNAVDDRNKTGPARVTLRSKIVS 2739
S SR L+ SKK+++ ++D + ++R K + + VS
Sbjct: 227 SGRGSKSRKDVREMPLEGSKKDNSDKPGEGSKKDEMRHTPREERRKDNMRDM---QREVS 283
Query: 2738 NGKTLEGKNDRYTHIDKAKDEYXXXXXXXXXXXRHSETSVQKHRSGGRIS--------GK 2583
L+ + + ID K + + S +K RS R G
Sbjct: 284 KKDNLKDRPKDISKIDNLKVKVKVPSKDDQRDAP--KKSSRKERSSTRDDSHLVDKDKGN 341
Query: 2582 YEEHK----SHNQAGENDERLQNRRXXXXXXXXXLEHMSQKRDSIDLTGADIYVDKSRVK 2415
+ HK + Q G++ R N SQKR + D+ + +
Sbjct: 342 HNSHKLSTYTSGQVGKS--RGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKER 399
Query: 2414 SEKET---RRKHHIDEERVREAQRSM--KHDAGK----RKYTDSSERKERVSAXXXXXXX 2262
SE+ T R+ D+E+ + R K DA + R + RKE
Sbjct: 400 SERRTDGKRKSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRS 459
Query: 2261 XXXXXXXXXXXXDIVGRHSS------QNTHKGSSHYRNSAVHSPKDMPGGLHTDTEKAST 2100
+ R S +++++G H HS D H +T++ T
Sbjct: 460 KRRRSTSRDHYQERHDRSVSPSSREQRHSYRGHGHDYYPPYHS-MDKSRRKHFETDRHRT 518
Query: 2099 DGTNXXXXXXXXXXXXXXG-YSPRKRKS-----DSATRTPSPLRRSPETRTIGWDLNPTV 1938
+ G YSPRKRK+ + +T S + RSPE ++ WD P
Sbjct: 519 SWNDGYSSGSYRRYESRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVA 578
Query: 1937 NGRSSTGGLVPSHSEPSSNQDLPYIISATLATAKPAIGILDHTRPLNVGAVDSIQLTQAT 1758
S+ V + +D ++ T + P I N+ AVDS+QLTQAT
Sbjct: 579 TDLSN---FVTTLQSTVGLKDSTVPVNFTTSKQDPNTTIGTILTGSNL-AVDSVQLTQAT 634
Query: 1757 RPMRRLYVENLPGSASEKAVMEWINSSLLFSGVNHIQGT-QPCISCVMNKEKGQALLEFL 1581
RP+RRL++ENLP A+E ++ +N LL S +HIQ + QPC+SCV+NK+K QA +EFL
Sbjct: 635 RPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFL 694
Query: 1580 TPEVASIAISLDGRSFSGSILKLRRPKDF 1494
TPE A+ A+S DGRSF GS LK+RRPK++
Sbjct: 695 TPEDATAALSFDGRSFGGSSLKIRRPKEY 723
>gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 227 bits (578), Expect(2) = 1e-95
Identities = 159/413 (38%), Positives = 219/413 (53%), Gaps = 25/413 (6%)
Frame = -3
Query: 1425 EKSVELANSISDTVVDSPNKIFVGGISKIISSEMVKEIAQVFGPLKAYHFEVNADTKKSY 1246
+K E ISD V DSP+KIF+ GIS +ISSEM+ EI FGPL AY F N +
Sbjct: 568 KKPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGAC 627
Query: 1245 AFLEYVDHSVTHKACAALNGMKLGGQILTVVQTILDDAEVANAECQPFYGIPEHAKPLLQ 1066
AFLEY+DHS+T KACA LNGMKLGG ILT V + E A E PFYGIP+ AK LL+
Sbjct: 628 AFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLE 687
Query: 1065 QPTQVLKLKNVFNLEGLVSLSEAEVNEVLEDTRIECSRFGTVKSVNYVKH---SNNTNIS 895
+PT+VL+LKNVF+ E + LS++E+ E+LED R+EC+RFG VKS+N VK+ S+NT
Sbjct: 688 EPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVKYPASSDNTTGD 747
Query: 894 QETNLMDIGSAEGHSVEKSESDPNKLAQADELELQCCDEDLVVNKISEFGN-SVAKPSNP 718
T D GS + +E E N E ++C V+N+ ++ + S+ + +P
Sbjct: 748 TITECED-GSTK---IEPKEYGGN--VSCTETGVECS----VLNQSTDVPDPSICEVQDP 797
Query: 717 DISSNHSEPKGSANY-----------VVSDSHT--------AELADEMND--GTHDTSNR 601
S PKG + D +T + D +D GT + +
Sbjct: 798 VELDTDSIPKGRDHKNLDTRGECDAPTAGDENTDQGVEADQTDSTDAQDDARGTIERGHA 857
Query: 600 DAPGPSSPENCGETAVNPTMEDHEIRKXXXXXXXXXXXXXXXXXXXEFDGLDKDEDNEMI 421
DA P+S E TA + K + +D DN +
Sbjct: 858 DA-DPASLETSCSTAPGDGAD-----KSGRENEQQGGAGVSESNTEKAPAVDA-RDNALA 910
Query: 420 SGLEGVFEPGCVLVEFKREEASCDAAHSLHGRLFENRVVTVEFVDLDVYRRRF 262
S + E GC+LVEF R+EA+C AAHSLHGR F +R+V+ + D+Y +++
Sbjct: 911 SNTSAL-EAGCILVEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKY 962
Score = 152 bits (385), Expect(2) = 1e-95
Identities = 159/567 (28%), Positives = 244/567 (43%), Gaps = 37/567 (6%)
Frame = -1
Query: 3083 DETSARTRPLSFDEVMLRRNNRKETAGDDIGSDEAHGLSKRHDVEVASKPAERKTATHID 2904
D T+ARTRPLS ++M RR K+TA + + E GL + + + + H++
Sbjct: 17 DGTAARTRPLSIQDIMSRRE--KKTASEAKKTKE--GLEENSNGK----------SNHLE 62
Query: 2903 SIPSGMSRALEESQRLKTSKKEHAS-----CQEDRLVRNAVDDRNKTGPARVTLRSKIVS 2739
S SR L+ SKK+++ ++D + ++R K + + VS
Sbjct: 63 SGRGSKSRKDVREMPLEGSKKDNSDKPGEGSKKDEMRHTPREERRKDNMRDM---QREVS 119
Query: 2738 NGKTLEGKNDRYTHIDKAKDEYXXXXXXXXXXXRHSETSVQKHRSGGR-----ISGKYEE 2574
L+ + + ID K + + S +K RS R +
Sbjct: 120 KKDNLKDRPKDISKIDNLKVKVKVPSKDDQRDAP--KKSSKKERSSTRDDSHLVDKDKGN 177
Query: 2573 HKSHNQAGENDERLQNRRXXXXXXXXXLE-----HMSQKRDSIDLTGADIYVDKSRVKSE 2409
H SH + R+ R + SQKR + D+ + +SE
Sbjct: 178 HNSHKLSTYTSGRVGKSRGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKERSE 237
Query: 2408 KET---RRKHHIDEERVREAQRSM--KHDAGK----RKYTDSSERKERVSAXXXXXXXXX 2256
+ T R D+E+ + R K DA + R + RKE
Sbjct: 238 RRTDGKRNSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRSKR 297
Query: 2255 XXXXXXXXXXDIVGRHSS------QNTHKGSSHYRNSAVHSPKDMPGGLHTDTEKASTDG 2094
+ R S +++++G H HS D H +T++ T
Sbjct: 298 RRSTSRDHYQERHDRSVSPSSREQRHSYRGHGHDYYPPYHS-MDKSRRKHFETDRHRTSW 356
Query: 2093 TNXXXXXXXXXXXXXXG-YSPRKRKS-----DSATRTPSPLRRSPETRTIGWDLNPTVNG 1932
+ G YSPRKRK+ + +T S + RSPE ++ WD P
Sbjct: 357 NDGYSSGSYRRYESRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVATD 416
Query: 1931 RSSTGGLVPSHSEPSSNQDLPYIISATLATAKPAIGILDHTRPLNVGAVDSIQLTQATRP 1752
S+ V + +D ++ T + P I N+ AVDS+QLTQATRP
Sbjct: 417 LSN---FVTTLQSTVGLKDSTVPVNFTTSKQDPNTTIGTILTGSNL-AVDSVQLTQATRP 472
Query: 1751 MRRLYVENLPGSASEKAVMEWINSSLLFSGVNHIQGT-QPCISCVMNKEKGQALLEFLTP 1575
+RRL++ENLP A+E ++ +N LL S +HIQ + QPC+SCV+NK+K QA +EFLTP
Sbjct: 473 LRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFLTP 532
Query: 1574 EVASIAISLDGRSFSGSILKLRRPKDF 1494
E A+ A+S DGRSF GS LK+RRPK++
Sbjct: 533 EDATAALSFDGRSFGGSSLKIRRPKEY 559
>gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 222 bits (566), Expect(2) = 2e-94
Identities = 158/413 (38%), Positives = 217/413 (52%), Gaps = 25/413 (6%)
Frame = -3
Query: 1425 EKSVELANSISDTVVDSPNKIFVGGISKIISSEMVKEIAQVFGPLKAYHFEVNADTKKSY 1246
+K E ISD V DSP+KIF+ GIS +ISSEM+ EI FGPL AY F N +
Sbjct: 568 KKPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGAC 627
Query: 1245 AFLEYVDHSVTHKACAALNGMKLGGQILTVVQTILDDAEVANAECQPFYGIPEHAKPLLQ 1066
AFLEY+DHS+T KACA LNGMKLGG ILT V + E A E PFYGIP+ AK LL+
Sbjct: 628 AFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLE 687
Query: 1065 QPTQVLKLKNVFNLEGLVSLSEAEVNEVLEDTRIECSRFGTVKSVNYVKH---SNNTNIS 895
+PT+VL+LKNVF+ E + LS++E+ E+LED R+E RFG VKS+N VK+ S+NT
Sbjct: 688 EPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVEYDRFGAVKSINVVKYPASSDNTTGD 747
Query: 894 QETNLMDIGSAEGHSVEKSESDPNKLAQADELELQCCDEDLVVNKISEFGN-SVAKPSNP 718
T D GS + +E E N E ++C V+N+ ++ + S+ + +P
Sbjct: 748 TITECED-GSTK---IEPKEYGGN--VSCTETGVECS----VLNQSTDVPDPSICEVQDP 797
Query: 717 DISSNHSEPKGSANY-----------VVSDSHT--------AELADEMND--GTHDTSNR 601
S PKG + D +T + D +D GT + +
Sbjct: 798 VELDTDSIPKGRDHKNLDTRGECDAPTAGDENTDQGVEADQTDSTDAQDDARGTIERGHA 857
Query: 600 DAPGPSSPENCGETAVNPTMEDHEIRKXXXXXXXXXXXXXXXXXXXEFDGLDKDEDNEMI 421
DA P+S E TA + K + +D DN +
Sbjct: 858 DA-DPASLETSCSTAPGDGAD-----KSGRENEQQGGAGVSESNTEKAPAVDA-RDNALA 910
Query: 420 SGLEGVFEPGCVLVEFKREEASCDAAHSLHGRLFENRVVTVEFVDLDVYRRRF 262
S + E GC+LVEF R+EA+C AAHSLHGR F +R+V+ + D+Y +++
Sbjct: 911 SNTSAL-EAGCILVEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKY 962
Score = 152 bits (385), Expect(2) = 2e-94
Identities = 159/567 (28%), Positives = 244/567 (43%), Gaps = 37/567 (6%)
Frame = -1
Query: 3083 DETSARTRPLSFDEVMLRRNNRKETAGDDIGSDEAHGLSKRHDVEVASKPAERKTATHID 2904
D T+ARTRPLS ++M RR K+TA + + E GL + + + + H++
Sbjct: 17 DGTAARTRPLSIQDIMSRRE--KKTASEAKKTKE--GLEENSNGK----------SNHLE 62
Query: 2903 SIPSGMSRALEESQRLKTSKKEHAS-----CQEDRLVRNAVDDRNKTGPARVTLRSKIVS 2739
S SR L+ SKK+++ ++D + ++R K + + VS
Sbjct: 63 SGRGSKSRKDVREMPLEGSKKDNSDKPGEGSKKDEMRHTPREERRKDNMRDM---QREVS 119
Query: 2738 NGKTLEGKNDRYTHIDKAKDEYXXXXXXXXXXXRHSETSVQKHRSGGR-----ISGKYEE 2574
L+ + + ID K + + S +K RS R +
Sbjct: 120 KKDNLKDRPKDISKIDNLKVKVKVPSKDDQRDAP--KKSSKKERSSTRDDSHLVDKDKGN 177
Query: 2573 HKSHNQAGENDERLQNRRXXXXXXXXXLE-----HMSQKRDSIDLTGADIYVDKSRVKSE 2409
H SH + R+ R + SQKR + D+ + +SE
Sbjct: 178 HNSHKLSTYTSGRVGKSRGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKERSE 237
Query: 2408 KET---RRKHHIDEERVREAQRSM--KHDAGK----RKYTDSSERKERVSAXXXXXXXXX 2256
+ T R D+E+ + R K DA + R + RKE
Sbjct: 238 RRTDGKRNSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRSKR 297
Query: 2255 XXXXXXXXXXDIVGRHSS------QNTHKGSSHYRNSAVHSPKDMPGGLHTDTEKASTDG 2094
+ R S +++++G H HS D H +T++ T
Sbjct: 298 RRSTSRDHYQERHDRSVSPSSREQRHSYRGHGHDYYPPYHS-MDKSRRKHFETDRHRTSW 356
Query: 2093 TNXXXXXXXXXXXXXXG-YSPRKRKS-----DSATRTPSPLRRSPETRTIGWDLNPTVNG 1932
+ G YSPRKRK+ + +T S + RSPE ++ WD P
Sbjct: 357 NDGYSSGSYRRYESRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVATD 416
Query: 1931 RSSTGGLVPSHSEPSSNQDLPYIISATLATAKPAIGILDHTRPLNVGAVDSIQLTQATRP 1752
S+ V + +D ++ T + P I N+ AVDS+QLTQATRP
Sbjct: 417 LSN---FVTTLQSTVGLKDSTVPVNFTTSKQDPNTTIGTILTGSNL-AVDSVQLTQATRP 472
Query: 1751 MRRLYVENLPGSASEKAVMEWINSSLLFSGVNHIQGT-QPCISCVMNKEKGQALLEFLTP 1575
+RRL++ENLP A+E ++ +N LL S +HIQ + QPC+SCV+NK+K QA +EFLTP
Sbjct: 473 LRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFLTP 532
Query: 1574 EVASIAISLDGRSFSGSILKLRRPKDF 1494
E A+ A+S DGRSF GS LK+RRPK++
Sbjct: 533 EDATAALSFDGRSFGGSSLKIRRPKEY 559