BLASTX nr result

ID: Lithospermum22_contig00005354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005354
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307857.1| predicted protein [Populus trichocarpa] gi|2...    66   1e-08
ref|XP_002323172.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08
ref|XP_002266806.1| PREDICTED: uncharacterized protein LOC100241...    58   3e-06

>ref|XP_002307857.1| predicted protein [Populus trichocarpa] gi|222853833|gb|EEE91380.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
 Frame = +2

Query: 125 TSSQTDFGKFYQLQNLSGQVLNNPKSIFGDHVTEA--MAXXXXXXXXXXXXXXXXXXXXX 298
           + + TD+ +FYQ QNLS QVL   + +F D V ++  +                      
Sbjct: 6   SDNPTDWSQFYQ-QNLSNQVLPPIRPMFRDRVADSTTVTTTTINTSGVPNPMGSSNSSSS 64

Query: 299 XXXNLSPEGRVSKXXXXXXXXXXXXXXTLVNTDPSNFRAMVQQFTGDPAAAYAAEPRYQM 478
              +LSPEGRV+K              TL+NTD +NFRAMVQQFTG P+A +A+  +   
Sbjct: 65  AGRHLSPEGRVAKPIRKRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFASGSQINA 124

Query: 479 PGDGNISFGFGL 514
                 +FGF L
Sbjct: 125 -----TNFGFAL 131


>ref|XP_002323172.1| predicted protein [Populus trichocarpa] gi|222867802|gb|EEF04933.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
 Frame = +2

Query: 140 DFGKFYQLQNLSGQVLNNPKSIFGDH-VTEAMAXXXXXXXXXXXXXXXXXXXXXXXXNLS 316
           D+ +FYQ QNLS QVL   + +F D  V +                           +LS
Sbjct: 11  DWSQFYQ-QNLSNQVLTPIRPMFNDRGVADVNIITSTTMDTASISNPMGSANPSSSGHLS 69

Query: 317 PEGRVSKXXXXXXXXXXXXXXTLVNTDPSNFRAMVQQFTGDPAAAYAAEPRYQMPGDGNI 496
           PEGRV+K              TL+NTD +NFRAMVQQFTG P+A +A   +       N 
Sbjct: 70  PEGRVAKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFATGSQINAT---NF 126

Query: 497 SFGFGLNQQ 523
            +  G+++Q
Sbjct: 127 GYAVGVHRQ 135


>ref|XP_002266806.1| PREDICTED: uncharacterized protein LOC100241630 [Vitis vinifera]
          Length = 211

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = +2

Query: 308 NLSPEGRVSKXXXXXXXXXXXXXXTLVNTDPSNFRAMVQQFTGDPAAAYAAEPRYQ---M 478
           +L+PEGRV+K              TL+NTD SNFRAMVQQFTG P+A +A   ++    M
Sbjct: 58  HLTPEGRVAKPIRRRSRASRRTPTTLLNTDTSNFRAMVQQFTGGPSAPFAGGNQHHHGAM 117

Query: 479 PGDGNISFGFGLNQQILNPTS 541
           PG     F FG   Q +NP++
Sbjct: 118 PG-----FAFG---QRVNPST 130


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