BLASTX nr result

ID: Lithospermum22_contig00005341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005341
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glyci...   211   2e-52
ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803...   210   6e-52
gb|ABC86742.1| RNA recognition motif-containing protein [Vitis p...   202   9e-50
ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   202   9e-50
ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicag...   191   2e-46

>ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glycine max]
          Length = 186

 Score =  211 bits (538), Expect = 2e-52
 Identities = 111/179 (62%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
 Frame = +1

Query: 115 MTSNPNCTIYVGNLDERVTDRVLYDILIQAGRVVDLYIPKDRETDKAKGYAFAEYETEEI 294
           M+ N NC++Y+GNLDERVTDRVLYDILIQAGRVVDL+IPKD+E++K KG+AFAEYETEEI
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 295 ADYAVRLFSGLVTLYNRTLKFAISGKDKPSLNPSMA-TPTL-LSQKPRPRALPYNDLDAS 468
           ADYAVRLFSGL+TLYNRTLKFAISG+DK + N S A TPT   SQ+PRP  +  N+ +  
Sbjct: 61  ADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAITPTSNSSQRPRPYPVSINNSENF 120

Query: 469 LHSTRLLGSSRYSEHQPTYVKEPAPPGVPEQQYNGYRSHYENNGYDYSPRVLGTSLDNI 645
            HS RL    R+S+H P    +  P  V +Q  +GY SHY  N Y+YS R  G +LD+I
Sbjct: 121 QHSARLSTPDRFSDH-PVNYSQVLPSRVTDQS-SGYGSHYSGNNYEYSRRAFGATLDSI 177


>ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803118 [Glycine max]
          Length = 196

 Score =  210 bits (534), Expect = 6e-52
 Identities = 110/179 (61%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
 Frame = +1

Query: 115 MTSNPNCTIYVGNLDERVTDRVLYDILIQAGRVVDLYIPKDRETDKAKGYAFAEYETEEI 294
           M+ N NC++Y+GNLDERVTDRVLYDILIQAGRVVDL+IPKD+E++K KG+AFAEYETEEI
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 295 ADYAVRLFSGLVTLYNRTLKFAISGKDKPSLNPSMA-TPTL-LSQKPRPRALPYNDLDAS 468
           ADYAVRLFSGL+TLYNRTLKFAISG+DK + N S A  PTL  SQ+PRP  +P N+ +  
Sbjct: 61  ADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAIAPTLNSSQRPRPYPVPINNSENF 120

Query: 469 LHSTRLLGSSRYSEHQPTYVKEPAPPGVPEQQYNGYRSHYENNGYDYSPRVLGTSLDNI 645
            H  RL    R+S++ P    +  P  V +Q  +GY SHY  N Y+YS R  G +LD+I
Sbjct: 121 QHPARLSTPDRFSDY-PVNNSQVLPSRVTDQS-SGYGSHYSGNNYEYSRRAFGATLDSI 177


>gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
          Length = 194

 Score =  202 bits (515), Expect = 9e-50
 Identities = 105/178 (58%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
 Frame = +1

Query: 115 MTSNPNCTIYVGNLDERVTDRVLYDILIQAGRVVDLYIPKDRETDKAKGYAFAEYETEEI 294
           M++   C++Y+GNLDERV+DRVLYDILIQAGRVVDLYIP+D+ETD+ KG+AFAEYETEEI
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 295 ADYAVRLFSGLVTLYNRTLKFAISGKDKPSLNPSMATPTLLSQ-KPRPRALPYNDLDASL 471
           ADYAV+LFSGLVTLYNRTLKFAISG+DKPS   +  TPT  S  +P+P  +P+N+++ S 
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFAISGQDKPS--SAAITPTSNSSLEPKPHPVPFNNMENSQ 118

Query: 472 HSTRLLGSSRYSEHQPTYVKEPAPPGVPEQQYNGYRSHYENNGYDYSPRVLGTSLDNI 645
           HS  L    R + H   Y + PA      Q  N Y S  + + YDYS RV G +LD+I
Sbjct: 119 HSMGLRTPCRLAAHPVNYAQVPASSDTLHQP-NRYSSQLDGHSYDYSRRVFGATLDSI 175


>ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|297734803|emb|CBI17037.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  202 bits (515), Expect = 9e-50
 Identities = 105/178 (58%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
 Frame = +1

Query: 115 MTSNPNCTIYVGNLDERVTDRVLYDILIQAGRVVDLYIPKDRETDKAKGYAFAEYETEEI 294
           M++   C++Y+GNLDERV+DRVLYDILIQAGRVVDLYIP+D+ETD+ KG+AFAEYETEEI
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 295 ADYAVRLFSGLVTLYNRTLKFAISGKDKPSLNPSMATPTLLSQ-KPRPRALPYNDLDASL 471
           ADYAV+LFSGLVTLYNRTLKFAISG+DKPS   +  TPT  S  +P+P  +P+N+++ S 
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFAISGQDKPS--SAAITPTSNSSLEPKPHPVPFNNMENSQ 118

Query: 472 HSTRLLGSSRYSEHQPTYVKEPAPPGVPEQQYNGYRSHYENNGYDYSPRVLGTSLDNI 645
           HS  L    R + H   Y + PA      Q  N Y S  + + YDYS RV G +LD+I
Sbjct: 119 HSMGLRTPCRLAAHPVNYAQVPASSDTLHQP-NRYSSQLDGHSYDYSRRVFGATLDSI 175


>ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
           gi|355481049|gb|AES62252.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
          Length = 200

 Score =  191 bits (486), Expect = 2e-46
 Identities = 104/180 (57%), Positives = 124/180 (68%), Gaps = 4/180 (2%)
 Frame = +1

Query: 115 MTSNPNCTIYVGNLDERVTDRVLYDILIQAGRVVDLYIPKDRETDKAKGYAFAEYETEEI 294
           M+ N +CT+Y+GNLDERVTDR+LYDILIQAGRVVDL+IPKD+E++K KG+AFAEYETEEI
Sbjct: 1   MSGNSSCTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 295 ADYAVRLFSGLVTLYNRTLKFAISGKDKPSLNPSMAT--PTLLSQKPRPRALPYNDLDAS 468
           ADYAVRLFSGLVTLY RTLKFAISG+DK + N S AT   +  SQ+PRP  +  N  +  
Sbjct: 61  ADYAVRLFSGLVTLYKRTLKFAISGRDKNTPNSSTATTPSSNSSQRPRPYPVQINSSENF 120

Query: 469 LHSTRLLGSSRYSEHQPTY--VKEPAPPGVPEQQYNGYRSHYENNGYDYSPRVLGTSLDN 642
            HS R     R+S+    Y  V E         Q N Y SH+  N  D+S R  G  LDN
Sbjct: 121 QHSARQSIPDRFSDRALNYSQVGELLGRNRATNQSNAYGSHFGGNHLDHSRRAFGEELDN 180


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