BLASTX nr result

ID: Lithospermum22_contig00005226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005226
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus ...   263   2e-68
ref|XP_002305359.1| predicted protein [Populus trichocarpa] gi|2...   261   1e-67
ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation fa...   255   7e-66
ref|XP_003554717.1| PREDICTED: probable ubiquitin conjugation fa...   254   1e-65
ref|XP_002324089.1| predicted protein [Populus trichocarpa] gi|2...   253   4e-65

>ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527331|gb|EEF29477.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 1031

 Score =  263 bits (673), Expect = 2e-68
 Identities = 129/171 (75%), Positives = 154/171 (90%), Gaps = 2/171 (1%)
 Frame = -3

Query: 710  YVHLARGDKENVFPAAITRDGRSFNEQLFAAGADVLRKIGEDARILQEFIDLGTKTKVAA 531
            YVHL+RGD EN+FPAAI++DGRS+NEQLF+A ADVLR+IGED R++QEF++LG+K KVAA
Sbjct: 861  YVHLSRGDAENIFPAAISKDGRSYNEQLFSAAADVLRRIGEDMRVIQEFVELGSKAKVAA 920

Query: 530  SDAMDAEAVLGDIPDEFLDPIQYTLMKDPVMLPSSRITLDRPVIQRHLLSDNSDPFNRSH 351
            S+AMD EAVLG+IPDEFLDPIQYTLMKDPV+LPSSRIT+DRPVIQRHLLSD +DPFNRSH
Sbjct: 921  SEAMDTEAVLGEIPDEFLDPIQYTLMKDPVILPSSRITIDRPVIQRHLLSDATDPFNRSH 980

Query: 350  LTAEMLIPNTELKARIEEFIRSQ--GQRSRDLSMQATKDTVHTTSHEPLIE 204
            LTA+MLIPN ELKARIEEFIR+Q   +R  D SMQ++K T+ TT+ E LI+
Sbjct: 981  LTADMLIPNVELKARIEEFIRNQELKRRGEDFSMQSSKATIQTTTGEMLID 1031


>ref|XP_002305359.1| predicted protein [Populus trichocarpa] gi|222848323|gb|EEE85870.1|
            predicted protein [Populus trichocarpa]
          Length = 930

 Score =  261 bits (666), Expect = 1e-67
 Identities = 127/171 (74%), Positives = 149/171 (87%), Gaps = 2/171 (1%)
 Frame = -3

Query: 710  YVHLARGDKENVFPAAITRDGRSFNEQLFAAGADVLRKIGEDARILQEFIDLGTKTKVAA 531
            YVHLARGD EN+FPAAI++DGRS+NEQLF A  DVLR+IGED R++QEFI+LGTK +VAA
Sbjct: 760  YVHLARGDNENIFPAAISKDGRSYNEQLFTAAVDVLRRIGEDGRVIQEFIELGTKARVAA 819

Query: 530  SDAMDAEAVLGDIPDEFLDPIQYTLMKDPVMLPSSRITLDRPVIQRHLLSDNSDPFNRSH 351
             +AMDAEA LG+IPDEFLDPIQ TLMKDPV+LPSSRIT+DRPVIQRHLLSDN+DPFNRSH
Sbjct: 820  CEAMDAEAALGEIPDEFLDPIQCTLMKDPVILPSSRITVDRPVIQRHLLSDNTDPFNRSH 879

Query: 350  LTAEMLIPNTELKARIEEFIRSQ--GQRSRDLSMQATKDTVHTTSHEPLIE 204
            LT +MLIPNTELKARI+EF+RSQ   +   D S+Q  KDT+ TT+ E LI+
Sbjct: 880  LTVDMLIPNTELKARIKEFVRSQELKKHGEDFSLQRAKDTIQTTTEEMLID 930


>ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
            max]
          Length = 1038

 Score =  255 bits (651), Expect = 7e-66
 Identities = 124/168 (73%), Positives = 150/168 (89%)
 Frame = -3

Query: 710  YVHLARGDKENVFPAAITRDGRSFNEQLFAAGADVLRKIGEDARILQEFIDLGTKTKVAA 531
            YVHLARGD  ++FPAAI++DGRS+N+QLF+AGADVL +IGED RI+QEFI LG K KVAA
Sbjct: 870  YVHLARGDTNSIFPAAISKDGRSYNDQLFSAGADVLHRIGEDGRIIQEFIQLGAKAKVAA 929

Query: 530  SDAMDAEAVLGDIPDEFLDPIQYTLMKDPVMLPSSRITLDRPVIQRHLLSDNSDPFNRSH 351
            S+AMD EA LG+IPDEFLDPIQYTLMKDPV+LPSSRIT+DRPVIQRHLLSD++DPFNRSH
Sbjct: 930  SEAMDTEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSH 989

Query: 350  LTAEMLIPNTELKARIEEFIRSQGQRSRDLSMQATKDTVHTTSHEPLI 207
            LTA+MLIP+ ELKARIEEF+RSQ +  + LS+Q+TK T+ TT+ E ++
Sbjct: 990  LTADMLIPDDELKARIEEFVRSQ-EMKKHLSLQSTKATIQTTNGETML 1036


>ref|XP_003554717.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
            max]
          Length = 1036

 Score =  254 bits (649), Expect = 1e-65
 Identities = 124/168 (73%), Positives = 150/168 (89%)
 Frame = -3

Query: 710  YVHLARGDKENVFPAAITRDGRSFNEQLFAAGADVLRKIGEDARILQEFIDLGTKTKVAA 531
            YVHLARGD  ++FPAAI++DGRS+N+QLF+AGADVL +IGED RI+QEFI LG K KVAA
Sbjct: 868  YVHLARGDTNSIFPAAISKDGRSYNDQLFSAGADVLHRIGEDGRIIQEFIQLGAKAKVAA 927

Query: 530  SDAMDAEAVLGDIPDEFLDPIQYTLMKDPVMLPSSRITLDRPVIQRHLLSDNSDPFNRSH 351
            S+AMDAEA LG+IPDEFLDPIQYTLMKDPV+LPSSRIT+DRPVIQRHLLSD++DPFNRSH
Sbjct: 928  SEAMDAEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSH 987

Query: 350  LTAEMLIPNTELKARIEEFIRSQGQRSRDLSMQATKDTVHTTSHEPLI 207
            LTA+MLIP+  LKARIEEF+RSQ +  + LS+Q+TK T+ TT+ E ++
Sbjct: 988  LTADMLIPDDALKARIEEFVRSQ-EMKKHLSLQSTKATIQTTNGETML 1034


>ref|XP_002324089.1| predicted protein [Populus trichocarpa] gi|222867091|gb|EEF04222.1|
            predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  253 bits (645), Expect = 4e-65
 Identities = 124/171 (72%), Positives = 147/171 (85%), Gaps = 2/171 (1%)
 Frame = -3

Query: 710  YVHLARGDKENVFPAAITRDGRSFNEQLFAAGADVLRKIGEDARILQEFIDLGTKTKVAA 531
            YVHLARGD EN+FPAAI +DGRS+NEQLF A ADVLR+IGED R++QEFI+LGTKTKVAA
Sbjct: 849  YVHLARGDTENIFPAAILKDGRSYNEQLFTAAADVLRRIGEDGRVVQEFIELGTKTKVAA 908

Query: 530  SDAMDAEAVLGDIPDEFLDPIQYTLMKDPVMLPSSRITLDRPVIQRHLLSDNSDPFNRSH 351
            S+AMDAE  LG++P+EFLDPIQ TLMKDPV+LPSSR T+DRPVI RHLLSDN+DPFNRSH
Sbjct: 909  SEAMDAEVTLGEVPEEFLDPIQCTLMKDPVILPSSRTTVDRPVILRHLLSDNTDPFNRSH 968

Query: 350  LTAEMLIPNTELKARIEEFIRSQ--GQRSRDLSMQATKDTVHTTSHEPLIE 204
            LT +MLI NTELKARI+E+IRSQ   +   D S+Q  K+T+ TT+ E LI+
Sbjct: 969  LTVDMLISNTELKARIDEYIRSQELKRHGEDFSLQRAKETIQTTTEEMLID 1019


Top