BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005211
         (1589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, ch...   592   e-167
ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop...   585   e-165
ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chlorop...   584   e-164
ref|XP_002311368.1| predicted protein [Populus trichocarpa] gi|1...   583   e-164
ref|XP_002874473.1| hypothetical protein ARALYDRAFT_489681 [Arab...   583   e-164

>sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, chloroplastic; AltName:
            Full=CS1; Flags: Precursor gi|18060|emb|CAA46927.1|
            ribosomal protein S1 [Spinacia oleracea]
            gi|170143|gb|AAA34045.1| chloroplast ribosomal protein S1
            [Spinacia oleracea]
          Length = 411

 Score =  592 bits (1527), Expect = e-167
 Identities = 316/406 (77%), Positives = 346/406 (85%), Gaps = 1/406 (0%)
 Frame = -3

Query: 1473 MASLTHQI-GGLVLPQISSTKLLSNKIHKQFEHQKRITIIRGAVITPGVPAVKDASTRER 1297
            MASL  Q+ GGL  P +S++ L S     +   + R + I  AV      AV +A TRER
Sbjct: 1    MASLAQQLAGGLRCPPLSNSNL-SKPFSPKHTLKPRFSPIVSAV------AVSNAQTRER 53

Query: 1296 AKLKEMFENAYERCRTTPMDGVPFSIDDFHTALEKYDFNSEVGTKVKGTVFKTDANGALV 1117
             KLK++FE+AYERCR  PM+GV F+IDDFHTAL+KYDFNSE+G++VKGTVF TDANGALV
Sbjct: 54   QKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALV 113

Query: 1116 DITAKSSAYLPLREASIHNIKHVEEAGIVPGMREEFVINGVNESDDSLVLSLRTVQYGLA 937
            DITAKSSAYLPL EA I+ IK+VEEAGI+PG+REEFVI G NE+DDSL+LSLR +QY LA
Sbjct: 114  DITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELA 173

Query: 936  WERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSSAEDLIEKEIPLKY 757
            WERCRQLQAED                  VEGLRGFVPFSQIS+KSSAE+L+EKEIPLK+
Sbjct: 174  WERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKF 233

Query: 756  VEVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQIS 577
            VEVDEEQSRLV+SNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQIS
Sbjct: 234  VEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS 293

Query: 576  HDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMA 397
            HDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMA
Sbjct: 294  HDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMA 353

Query: 396  QTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPADG 259
            QTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPA+G
Sbjct: 354  QTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEG 399


>ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera]
            gi|296083203|emb|CBI22839.3| unnamed protein product
            [Vitis vinifera]
          Length = 410

 Score =  585 bits (1509), Expect = e-165
 Identities = 306/405 (75%), Positives = 340/405 (83%)
 Frame = -3

Query: 1473 MASLTHQIGGLVLPQISSTKLLSNKIHKQFEHQKRITIIRGAVITPGVPAVKDASTRERA 1294
            MA L  Q  GL  P ISS++L      KQ +    + I+          A+ +A T+ER 
Sbjct: 1    MACLAQQFTGLRCPPISSSRLSKPFSPKQPQKPSFVRIVSAV-------AISNAQTKERL 53

Query: 1293 KLKEMFENAYERCRTTPMDGVPFSIDDFHTALEKYDFNSEVGTKVKGTVFKTDANGALVD 1114
            KLKEMFE+AYERCRT P +GV FS DDF++AL+KYDFNSE+GTKVKGTVF TD NGALVD
Sbjct: 54   KLKEMFEDAYERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALVD 113

Query: 1113 ITAKSSAYLPLREASIHNIKHVEEAGIVPGMREEFVINGVNESDDSLVLSLRTVQYGLAW 934
            ITAKSSAYLP+ EA IH IKHVEEAGIVPG+REEFVI G NE+DDSL+LSLR++QY LAW
Sbjct: 114  ITAKSSAYLPVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILSLRSIQYDLAW 173

Query: 933  ERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSSAEDLIEKEIPLKYV 754
            ERCRQLQAED                  VEGLRGFVPFSQIS+K++AE+L++KE+P+K+V
Sbjct: 174  ERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEELLDKELPVKFV 233

Query: 753  EVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISH 574
            EVDEEQSRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISH
Sbjct: 234  EVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 293

Query: 573  DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 394
            DRVSDIATVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
Sbjct: 294  DRVSDIATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 353

Query: 393  TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPADG 259
            TFRQRIAQAEAMARADMLRFQPESGLTL+SDGILGP+++DLPA+G
Sbjct: 354  TFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPVSADLPAEG 398


>ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis
            sativus] gi|449517357|ref|XP_004165712.1| PREDICTED: 30S
            ribosomal protein S1, chloroplastic-like [Cucumis
            sativus]
          Length = 413

 Score =  584 bits (1506), Expect = e-164
 Identities = 302/405 (74%), Positives = 342/405 (84%)
 Frame = -3

Query: 1473 MASLTHQIGGLVLPQISSTKLLSNKIHKQFEHQKRITIIRGAVITPGVPAVKDASTRERA 1294
            MAS+  Q  GL    +SS++L      K F ++ R   ++ AVI+  +P+ +   TRER 
Sbjct: 1    MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQ---TRERF 57

Query: 1293 KLKEMFENAYERCRTTPMDGVPFSIDDFHTALEKYDFNSEVGTKVKGTVFKTDANGALVD 1114
            KLKE+FE AYERCR  P++G+ F+++DFH ALEKYDF+SE+GTKVKGTVF TD NGALVD
Sbjct: 58   KLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVD 117

Query: 1113 ITAKSSAYLPLREASIHNIKHVEEAGIVPGMREEFVINGVNESDDSLVLSLRTVQYGLAW 934
            ITAKSSAYLPL+EA IH IKHVEEAG+ PG+REEFVI G NESDDSL+LSLR++QY LAW
Sbjct: 118  ITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAW 177

Query: 933  ERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSSAEDLIEKEIPLKYV 754
            ERCRQLQAED                  VEGLRGFVPFSQISTKS+AE+L+ KE+PLK+V
Sbjct: 178  ERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFV 237

Query: 753  EVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISH 574
            EVDEEQSRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISH
Sbjct: 238  EVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 297

Query: 573  DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 394
            DR+SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
Sbjct: 298  DRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 357

Query: 393  TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPADG 259
            TFRQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+T +LP +G
Sbjct: 358  TFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEG 402


>ref|XP_002311368.1| predicted protein [Populus trichocarpa] gi|118485696|gb|ABK94698.1|
            unknown [Populus trichocarpa] gi|222851188|gb|EEE88735.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  583 bits (1504), Expect = e-164
 Identities = 304/405 (75%), Positives = 337/405 (83%)
 Frame = -3

Query: 1473 MASLTHQIGGLVLPQISSTKLLSNKIHKQFEHQKRITIIRGAVITPGVPAVKDASTRERA 1294
            MASL  Q  GL  P IS ++L        F   KR       V+T    A+ +A T+ER 
Sbjct: 1    MASLAQQFAGLRCPPISISRLTERAA--TFSKPKRAA---NFVVTAKAVAISNAQTKERE 55

Query: 1293 KLKEMFENAYERCRTTPMDGVPFSIDDFHTALEKYDFNSEVGTKVKGTVFKTDANGALVD 1114
            KLK++FE AYERCRT PM+GV F+++DFH+AL+ YDFNSE+GT+VKGTVF TD NGALVD
Sbjct: 56   KLKQLFEEAYERCRTAPMEGVSFTVEDFHSALDAYDFNSEIGTRVKGTVFMTDNNGALVD 115

Query: 1113 ITAKSSAYLPLREASIHNIKHVEEAGIVPGMREEFVINGVNESDDSLVLSLRTVQYGLAW 934
            ITAKSSAYLP++EASIH IK +EEAGIVPGMREEFVI G NE+DDSL+LSLR++ Y LAW
Sbjct: 116  ITAKSSAYLPVQEASIHRIKRLEEAGIVPGMREEFVIIGENEADDSLILSLRSIHYELAW 175

Query: 933  ERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSSAEDLIEKEIPLKYV 754
            ERCRQLQAED                  VEGLRGFVPFSQIS+KS+ E+L++KE PLK+V
Sbjct: 176  ERCRQLQAEDVIVKGKVVGGNKGGLVAVVEGLRGFVPFSQISSKSTPEELLDKEFPLKFV 235

Query: 753  EVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISH 574
            +VDEEQSRL+LSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISH
Sbjct: 236  DVDEEQSRLILSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 295

Query: 573  DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 394
            DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
Sbjct: 296  DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 355

Query: 393  TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPADG 259
            TFRQRIAQAEAMARADMLRFQPESGLTLSSDGIL PL SD+PA+G
Sbjct: 356  TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILSPLNSDMPAEG 400


>ref|XP_002874473.1| hypothetical protein ARALYDRAFT_489681 [Arabidopsis lyrata subsp.
            lyrata] gi|297320310|gb|EFH50732.1| hypothetical protein
            ARALYDRAFT_489681 [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score =  583 bits (1503), Expect = e-164
 Identities = 305/405 (75%), Positives = 337/405 (83%)
 Frame = -3

Query: 1473 MASLTHQIGGLVLPQISSTKLLSNKIHKQFEHQKRITIIRGAVITPGVPAVKDASTRERA 1294
            MASL  Q  GL    +SS+  LS  + K F   K  ++    V      A+    T+ER 
Sbjct: 1    MASLAQQFTGLRCSPLSSSSRLSRSVSKNFPQNKSASVSPTIV---AAVAISSGQTKERL 57

Query: 1293 KLKEMFENAYERCRTTPMDGVPFSIDDFHTALEKYDFNSEVGTKVKGTVFKTDANGALVD 1114
            +LK+MFE+AYERCRT PM+GV FS+DDF  A+E+YDFNSE+GT+VKGTVFKTDANGALVD
Sbjct: 58   ELKKMFEDAYERCRTAPMEGVAFSVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVD 117

Query: 1113 ITAKSSAYLPLREASIHNIKHVEEAGIVPGMREEFVINGVNESDDSLVLSLRTVQYGLAW 934
            I+AKSSAYL + +A IH IKHVEEAGIVPGM EEFVI G NESDDSL+LSLR +QY LAW
Sbjct: 118  ISAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAW 177

Query: 933  ERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSSAEDLIEKEIPLKYV 754
            ERCRQLQAED                  VEGLRGFVPFSQIS+K++AE+L+EKEIPLK+V
Sbjct: 178  ERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFV 237

Query: 753  EVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISH 574
            EVDEEQ++LVLSNRKA+ADSQAQLGIGSVVLG VQSLKPYGAFIDIGGINGLLHVSQISH
Sbjct: 238  EVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISH 297

Query: 573  DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 394
            DRVSDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
Sbjct: 298  DRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 357

Query: 393  TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPADG 259
            TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPL S+LP DG
Sbjct: 358  TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDG 402