BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005198
         (1618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   188   1e-78
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   180   3e-72
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   159   5e-71
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   148   2e-70
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   164   2e-69

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  188 bits (477), Expect(2) = 1e-78
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 7/312 (2%)
 Frame = -1

Query: 1183 GGVGKSRDEGGLGFKVMEHFNMALLAK*AWRIATRPESDVGRVFKAKYFPDNNFWDASLG 1004
            G + K + +GGLGF+ +  FN+ALLAK  WR    P+S V R+F+A+YF +++F +A LG
Sbjct: 310  GKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELG 369

Query: 1003 YDPSFTWRSILEARKLLRQGCSWRVGNGNTTRIWGGHWVAGDKATSLITTPPPGFESARV 824
             +PS+ WRSIL A+ LL++GC W + +G   ++WG  W+       +IT P  GF+  +V
Sbjct: 370  SNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKV 429

Query: 823  ALLMETEQN*WDADLMRSIFLPFEADLILQMPFPDRSQEDTVLWKHSPAYQLLHTTS--- 653
              L+   +  W  D +R  F+  +ADLIL +P P  S+ED + W      +    +    
Sbjct: 430  DELI--TEGLWREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGA 487

Query: 652  ----ERDKQKASSSGKPPTTWRKIWKLKAPSKIKHFCWKLYSDCLPNASNLRKRGVLSQR 485
                 +     +S       W ++WK+ AP KI +F W+   +CLP    L  R V +  
Sbjct: 488  LRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPM 547

Query: 484  GCPLCRAKEEDSTHTFQRCPFTSETLTRQQLKSFPYQFACMQDLVEFSFDNLEKDQLTKW 305
             CP+CR++ E + H    C    +      L      F    D +   F   +     K+
Sbjct: 548  CCPICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKY 607

Query: 304  VITMWDVWRQRN 269
            +   W +W +RN
Sbjct: 608  LAVCWGLWWRRN 619



 Score =  133 bits (335), Expect(2) = 1e-78
 Identities = 66/155 (42%), Positives = 100/155 (64%), Gaps = 7/155 (4%)
 Frame = -2

Query: 1617 LFDQASGDESRAIKQVLMQYELASGQRVNFNKSSICFSPNINAAVREEIMQILEVEEVAS 1438
            LF +A+  ESR++KQ+L++Y+  SGQ +N NKS++ FS N +  V+  I  IL+VEE A 
Sbjct: 155  LFFKATESESRSLKQILLRYQNLSGQEINLNKSALTFSRNTDDVVKRGICSILQVEEXAD 214

Query: 1437 HGKYLGLPTVVGRSKIEVFASITDRVRKKLQGWQAKSLSKAGKKVLLKSAVQAIPNYAMQ 1258
             G YLG+P VVG++K ++F  +  +V  ++Q W  + LS+AGK++ LK+  Q+IP Y MQ
Sbjct: 215  PGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQ 274

Query: 1257 WFKLPLNLCHEIESMM-------AE*KRKLHWVAW 1174
               LP +LC +IESMM           R + W++W
Sbjct: 275  LLLLPKDLCRDIESMMNGFFWDSNPQCRSIRWMSW 309


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  180 bits (456), Expect(2) = 3e-72
 Identities = 107/335 (31%), Positives = 169/335 (50%), Gaps = 16/335 (4%)
 Frame = -1

Query: 1168 SRDEGGLGFKVMEHFNMALLAK*AWRIATRPESDVGRVFKAKYFPDNNFWDASLGYDPSF 989
            S+ +GGLGF+ ++ FN ALLAK  WR+ T P+S   +VFK +YF  +N  D+   Y PS+
Sbjct: 631  SKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSY 690

Query: 988  TWRSILEARKLLRQGCSWRVGNGNTTRIWGGHWVAGD-----KATSLITTPPPGFESARV 824
             WRS++ AR L+ +G   RVG+G +  +W   W+        K    I  P     S +V
Sbjct: 691  GWRSMISARSLVYKGLIKRVGSGASISVWNDPWIPAQFPRPAKYGGSIVDP-----SLKV 745

Query: 823  ALLMETEQN*WDADLMRSIFLPFEADLILQMPFPDRSQEDTVLWKHSPAYQLL----HTT 656
              L+++  N W+ DL++ +F P +  LI  +P  + + EDT+ W  + A        + T
Sbjct: 746  KSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHT 805

Query: 655  SERDKQKASSSGKPPTTWRK--IWKLKAPSKIKHFCWKLYSDCLPNASNLRKRGVLSQRG 482
            +  D  + ++   P  T  K  IWK++ P K++HF W++ S C+P + NLRKRG+L  +G
Sbjct: 806  ARLDLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKG 865

Query: 481  CPLCRAKEEDSTHTFQRCPFTSETLTRQQLKSFPYQFACMQ-----DLVEFSFDNLEKDQ 317
            C  C A EE   HT  +C    +     Q+ + P  F         D + +   +     
Sbjct: 866  CVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNLDHLFWRIPSGVDSA 925

Query: 316  LTKWVITMWDVWRQRNLALREEPIRQPEETATFAL 212
               W+I  W +W+ RN  + E   + P E    A+
Sbjct: 926  PYPWII--WYIWKARNEKVFENVDKDPMEILLLAV 958



 Score =  120 bits (300), Expect(2) = 3e-72
 Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
 Frame = -2

Query: 1614 FDQASGDESRAIKQVLMQYELASGQRVNFNKSSICFSPNINAAVREEIMQILEVEEVASH 1435
            F +A+ ++   I ++L QYE  SGQ++NF+KSSI F   +  +++ +I  IL +  +   
Sbjct: 472  FCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGM 531

Query: 1434 GKYLGLPTVVGRSKIEVFASITDRVRKKLQGWQAKSLSKAGKKVLLKSAVQAIPNYAMQW 1255
            G YLGLP  +G SK +VF+ + DR++ ++ GW AK LSK GK+V++KS    +P Y M  
Sbjct: 532  GSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSC 591

Query: 1254 FKLPLNLCHEIESMMAE-------*KRKLHWVAW 1174
            F+LP  +  ++ S +A+         R +HW+AW
Sbjct: 592  FRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAW 625


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  159 bits (401), Expect(2) = 5e-71
 Identities = 104/347 (29%), Positives = 158/347 (45%), Gaps = 17/347 (4%)
 Frame = -1

Query: 1171 KSRDEGGLGFKVMEHFNMALLAK*AWRIATRPESDVGRVFKAKYFPDNNFWDASLGYDPS 992
            K +  GG+GFK +  FN ALL K  WR+    ES + RV  AKY+P  +   A LGY  S
Sbjct: 853  KPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLGYSHS 912

Query: 991  FTWRSILEARKLLRQGCSWRVGNGNTTRIWGGHWVAGDKATSLITTPPPGFESARVALLM 812
            ++WRSI  A+ L+ +G  WRVG+G    IW   WV  ++   + +    G E   V  LM
Sbjct: 913  YSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRFIKSARVEGLEV--VGDLM 970

Query: 811  ETEQN*WDADLMRSIFLPFEADLILQMPFPDRSQEDTVLWKHSPAYQLLHTTSERDKQKA 632
            + E+  W+ +L+   F   +   IL +P   R  +D + W    AY    T S +     
Sbjct: 971  DVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTW----AYSKDGTYSVKTAYML 1026

Query: 631  SSSGKPP---TTWRKIWKLKAPSKIKHFCWKLYSDCLPNASNLRKRGVLSQRGCPLCRAK 461
               G        W  +W L    K++HF W+  +  LP    L++R ++ + GCP C  +
Sbjct: 1027 GKGGNLDDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCARE 1086

Query: 460  EEDSTHTFQRCPFTS---ETLTRQQLKSFPYQFACMQDLVEFSFDNLEKDQLTKWVITMW 290
            +E   H F RCP +    E L    L       A    LV +S   ++   + K    +W
Sbjct: 1087 DETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRWS--QMDAKVVQKGCYILW 1144

Query: 289  DVWRQRNLALREEP-----------IRQPEETATFALNFMSRMANAA 182
            +VW +RN  + E             +RQ E+   +A+     M ++A
Sbjct: 1145 NVWVERNRRVFEHTSQPATVVGQRIMRQVEDFNNYAVKIYGGMRSSA 1191



 Score =  137 bits (345), Expect(2) = 5e-71
 Identities = 66/155 (42%), Positives = 102/155 (65%), Gaps = 7/155 (4%)
 Frame = -2

Query: 1617 LFDQASGDESRAIKQVLMQYELASGQRVNFNKSSICFSPNINAAVREEIMQILEVEEVAS 1438
            LF +A+  E   I  +L +YE ASGQ++N+ KS + FS  ++   +EE++ +L + +V  
Sbjct: 694  LFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDR 753

Query: 1437 HGKYLGLPTVVGRSKIEVFASITDRVRKKLQGWQAKSLSKAGKKVLLKSAVQAIPNYAMQ 1258
            H KYLG+P + GRSK  +F  + DR+ KKL+GW+ K LS+AGK+VL+K+ +QA+P Y M 
Sbjct: 754  HQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMG 813

Query: 1257 WFKLPLNLCHEIESMMAE-------*KRKLHWVAW 1174
             +KLP+ +  EI S MA         +RK+HW++W
Sbjct: 814  VYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSW 848


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  148 bits (373), Expect(2) = 2e-70
 Identities = 91/299 (30%), Positives = 142/299 (47%), Gaps = 3/299 (1%)
 Frame = -1

Query: 1156 GGLGFKVMEHFNMALLAK*AWRIATRPESDVGRVFKAKYFPDNNFWDASLGYDPSFTWRS 977
            GG+GF+ +  FN ALL + AWR+   P S + RV KAKY+ +++F DA LG   S++WRS
Sbjct: 855  GGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRS 914

Query: 976  ILEARKLLRQGCSWRVGNGNTTRIWGGHWVAGDKATSLITTPPPGFESARVALLMETEQN 797
            I  ++ LL++G  WR+GNG   RIW   WV  D+    IT+   G     V+ L++ ++ 
Sbjct: 915  IWSSKALLKEGMVWRIGNGTNVRIWEDPWVL-DELGRFITSEKHG-NLNMVSELIDFDRM 972

Query: 796  *WDADLMRSIFLPFEADLILQMPFPDRSQEDTVLWKHSPAYQLLHTTSERDKQKASSSGK 617
             W   L+ ++F   +   IL +P      +D + W  +        T+     K  +   
Sbjct: 973  EWKVSLIETVFNERDIKCILSIPLSSLPLKDELTWAFTKNAHYSVKTAYM-LGKGGNLDS 1031

Query: 616  PPTTWRKIWKLKAPSKIKHFCWKLYSDCLPNASNLRKRGVLSQRGCPLCRAKEEDSTHTF 437
                W  IW ++   K+KHF W+L ++ LP  S L+ R +L    CP    + E   H  
Sbjct: 1032 FHQAWIDIWSMEVSPKVKHFLWRLGTNTLPVRSLLKHRHMLDDDLCPRGCGEPESQFHAI 1091

Query: 436  QRCPFTSETLTR---QQLKSFPYQFACMQDLVEFSFDNLEKDQLTKWVITMWDVWRQRN 269
              CPF  +          ++     A  + LV  +   L+    TK     W +W +RN
Sbjct: 1092 FGCPFIRDLWVDSGCDNFRALTTDTAMTEALV--NSHGLDASVRTKGAFMAWVLWSERN 1148



 Score =  146 bits (368), Expect(2) = 2e-70
 Identities = 70/155 (45%), Positives = 106/155 (68%), Gaps = 7/155 (4%)
 Frame = -2

Query: 1617 LFDQASGDESRAIKQVLMQYELASGQRVNFNKSSICFSPNINAAVREEIMQILEVEEVAS 1438
            LF +AS  E   I ++L  YE ASGQ++N++KS + FS  ++ A +EE+  IL++++V  
Sbjct: 691  LFTRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVER 750

Query: 1437 HGKYLGLPTVVGRSKIEVFASITDRVRKKLQGWQAKSLSKAGKKVLLKSAVQAIPNYAMQ 1258
            H KYLG+P++ GRS+  +F S+ DR+ KKLQGW+ K LS+AGK++LLKS +QAIP Y M 
Sbjct: 751  HMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMG 810

Query: 1257 WFKLPLNLCHEIESMMA-------E*KRKLHWVAW 1174
             +KLP ++  +I S MA       + +R++HW  W
Sbjct: 811  VYKLPCSIIQKIHSAMARFWWGSSDTQRRIHWKNW 845


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  164 bits (416), Expect(2) = 2e-69
 Identities = 97/338 (28%), Positives = 154/338 (45%), Gaps = 4/338 (1%)
 Frame = -1

Query: 1165 RDEGGLGFKVMEHFNMALLAK*AWRIATRPESDVGRVFKAKYFPDNNFWDASLGYDPSFT 986
            + EGGLGFK +  FN  +L K AW+  T P + V R+FKAKYF   +F D+ +G++PS+ 
Sbjct: 1250 KKEGGLGFKNLRAFNEGMLGKQAWKFMTEPHNIVTRLFKAKYFNKCDFLDSKIGHNPSYV 1309

Query: 985  WRSILEARKLLRQGCSWRVGNGNTTRIWGGHWVAGDKATSLITTPPPGFESARVALLMET 806
            WR+I  A++++ +G  W +G+G    +W   W+          + P  F+   VA L  +
Sbjct: 1310 WRNIWGAKRVVSEGYKWSIGSGTDICVWDQRWLVDGGVLQKPESLPEEFKELTVADLFIS 1369

Query: 805  EQN*WDADLMRSIFLPFEADLILQMPFPDRSQEDTVLWKHSPAYQLLHTTSERDKQKASS 626
            +   W+  L+R++                 S EDT    ++P ++  H +   D      
Sbjct: 1370 QTRFWNVGLLRNLV----------------SNEDTNRILNTPIFEPNHLSQHVDLSTHRC 1413

Query: 625  SGKPPTTWRKIWKLKAPSKIKHFCWKLYSDCLPNASNLRKRGVLSQRGCPLCRAKEEDST 446
             G     W  +W LK P K+K F W+   + LP    L+ RGV   + C LC  ++EDS 
Sbjct: 1414 DG----NWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSM 1469

Query: 445  HTFQRCPFTSETLTRQQLKSFPYQFACMQ---DLVEFS-FDNLEKDQLTKWVITMWDVWR 278
            H F  C  + +   +  L S   Q A +     +  F     L+  Q   W   MW +W+
Sbjct: 1470 HLFFYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWK 1529

Query: 277  QRNLALREEPIRQPEETATFALNFMSRMANAAFVANQP 164
            QRN  +    +          LN ++   NA  +  +P
Sbjct: 1530 QRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQDIWRKP 1567



 Score =  126 bits (316), Expect(2) = 2e-69
 Identities = 60/142 (42%), Positives = 97/142 (68%)
 Frame = -2

Query: 1617 LFDQASGDESRAIKQVLMQYELASGQRVNFNKSSICFSPNINAAVREEIMQILEVEEVAS 1438
            LF +A   +++ +K +L  YE +SGQ +NF KS + +S N++ AV+  I QIL V++V  
Sbjct: 1111 LFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMG 1170

Query: 1437 HGKYLGLPTVVGRSKIEVFASITDRVRKKLQGWQAKSLSKAGKKVLLKSAVQAIPNYAMQ 1258
             GKYLG+P++VGRS+I  F  + +RV KK+  W +K LS+AG++ L+KS +Q+IP Y M 
Sbjct: 1171 TGKYLGVPSMVGRSRISTFKFVKERVWKKINSWSSKCLSQAGRETLIKSVLQSIPFYIMS 1230

Query: 1257 WFKLPLNLCHEIESMMAE*KRK 1192
             F +P ++  +IE M++  K++
Sbjct: 1231 IFAIPKSIIVDIEKMLSIHKKE 1252