BLASTX nr result

ID: Lithospermum22_contig00005145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005145
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318038.1| predicted protein [Populus trichocarpa] gi|2...   161   8e-38
ref|XP_002511411.1| protein binding protein, putative [Ricinus c...   157   2e-36
ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 ...   151   7e-35
ref|XP_003608971.1| RING finger protein [Medicago truncatula] gi...   150   2e-34
ref|XP_002321588.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34

>ref|XP_002318038.1| predicted protein [Populus trichocarpa] gi|222858711|gb|EEE96258.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  161 bits (407), Expect = 8e-38
 Identities = 79/116 (68%), Positives = 89/116 (76%), Gaps = 6/116 (5%)
 Frame = -3

Query: 574 VRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNIRADSERSPAIVVSTNQ 395
           VRGLPCAHNFHV CIDEWLRLNVKCPRCRCSVFPNLDLSA+SN+RADSERSPA  V+TN+
Sbjct: 259 VRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSAISNLRADSERSPA-TVTTNR 317

Query: 394 YIRTPPPSQSYLLRLQGLLWPVRTGDGG------VALETAGNSEVGMAANHEERAE 245
           Y+RT P S SYLLRLQGLLWPV++G+ G      + +E A N    MA       E
Sbjct: 318 YVRTVPSSHSYLLRLQGLLWPVQSGNAGDPTDADIDVEAAENGSAHMATGERTGTE 373


>ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
           gi|223550526|gb|EEF52013.1| protein binding protein,
           putative [Ricinus communis]
          Length = 381

 Score =  157 bits (396), Expect = 2e-36
 Identities = 73/88 (82%), Positives = 78/88 (88%)
 Frame = -3

Query: 574 VRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNIRADSERSPAIVVSTNQ 395
           VRGLPCAHNFHV CIDEWLRLNVKCPRCRCSVFPNLDLSALSN+RAD ER PA  V+TN+
Sbjct: 248 VRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRADPERPPAADVTTNR 307

Query: 394 YIRTPPPSQSYLLRLQGLLWPVRTGDGG 311
           Y+RT P SQSYLLRLQGLL P+RT D G
Sbjct: 308 YVRTQPSSQSYLLRLQGLLRPIRTEDAG 335


>ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 [Vitis vinifera]
          Length = 381

 Score =  151 bits (382), Expect = 7e-35
 Identities = 75/117 (64%), Positives = 85/117 (72%), Gaps = 6/117 (5%)
 Frame = -3

Query: 574 VRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNIRADSERSPAIVVSTNQ 395
           VRGLPCAHNFHV CIDEWLRLNVKCPRCRCSVFPNLDLSAL++ RADSERS A VV+  +
Sbjct: 248 VRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALTHFRADSERSSASVVTATR 307

Query: 394 YIRTPPPSQSYLLRLQGLLWPVRTGDGGV------ALETAGNSEVGMAANHEERAEP 242
           Y+R  PPSQ Y+LRLQG L PVRT + G       ALE A N  + +  +     EP
Sbjct: 308 YVRVQPPSQGYMLRLQGFLRPVRTENAGAGNDADNALENAENGGLPVVTDDLTNTEP 364


>ref|XP_003608971.1| RING finger protein [Medicago truncatula]
           gi|355510026|gb|AES91168.1| RING finger protein
           [Medicago truncatula]
          Length = 365

 Score =  150 bits (378), Expect = 2e-34
 Identities = 76/102 (74%), Positives = 81/102 (79%), Gaps = 6/102 (5%)
 Frame = -3

Query: 574 VRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNIRADSERSPAIVVSTNQ 395
           VRGLPCAHNFHV CIDEWLRLNVKCPRCRCSVFPNLDLSALSN+R DSERS   VV+T +
Sbjct: 231 VRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTTTR 290

Query: 394 YIRTPPPSQSYLLRLQGLLWPVRT------GDGGVALETAGN 287
           Y+R  P SQSYLLRLQGLL PVRT      GD   AL+ A N
Sbjct: 291 YVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDNALQNAEN 332


>ref|XP_002321588.1| predicted protein [Populus trichocarpa] gi|222868584|gb|EEF05715.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  150 bits (378), Expect = 2e-34
 Identities = 71/84 (84%), Positives = 76/84 (90%)
 Frame = -3

Query: 574 VRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNIRADSERSPAIVVSTNQ 395
           VRGLPCAHNFHV CIDEWLRLNVKCPRCRCSVFPNLDLSALSN+ ADSERSPA   +TN+
Sbjct: 248 VRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLLADSERSPA-TPTTNR 306

Query: 394 YIRTPPPSQSYLLRLQGLLWPVRT 323
           Y+RT P SQ YLLR+QGLLWPVRT
Sbjct: 307 YVRTVPFSQIYLLRMQGLLWPVRT 330


Top