BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005108
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   333   5e-89
emb|CBI37850.3| unnamed protein product [Vitis vinifera]              333   5e-89
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...   323   5e-86
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...   323   5e-86
ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brac...   316   6e-84

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  333 bits (853), Expect = 5e-89
 Identities = 199/334 (59%), Positives = 214/334 (64%), Gaps = 13/334 (3%)
 Frame = -2

Query: 964  EPEADPERDQRTVFAYQISLKADERDVYEFFSRVGKVRDVRLIMDRITKRSKGVGYVEFY 785
            EPEADPERDQRTVFAYQI LKADERDVYEFFSR GKVRDVRLIMDR ++RSKGVGY+EFY
Sbjct: 209  EPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 268

Query: 784  DVMSVPMAIALSGQPLLGVPVMVKPSEAEKNLVQST---ASMTTXXXXXXXXXARKLYVG 614
            D MSVPMAIALSGQPLLG PVMVKPSEAEKNLVQST   A             AR+LYVG
Sbjct: 269  DAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVG 328

Query: 613  NLHLSIREDQLRQVFEAFGTVELVQLPTDLQTGQCKGFAFVQFARLEDAKAAQNLNGQLE 434
            NLH +I EDQLRQVFE FGTVELVQLPTDL+TG CKGF FVQFARLEDA+AAQ+LNGQL+
Sbjct: 329  NLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLD 388

Query: 433  IAGRVIKVSAVTDQTGGQDIGVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIXXXXX 254
            IAGR IKVS VTDQ G QDIG N                                     
Sbjct: 389  IAGRTIKVSVVTDQAGLQDIGANA----------------------------GDFDDDEG 420

Query: 253  XGLSLNASSRALLMQKLDRTGTASSFAGPFSSTASTAXXXXXXXXXXXGSNLAVSSLVAP 74
             GLSLNA SRA+LMQKLDR+GT    AG   S                G+   VS LVAP
Sbjct: 421  GGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAP 480

Query: 73   FGQ----------XXXXXXXXXXXPAMDTVGVPS 2
              Q                     P++DT+GVPS
Sbjct: 481  LVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPS 514


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  333 bits (853), Expect = 5e-89
 Identities = 199/334 (59%), Positives = 214/334 (64%), Gaps = 13/334 (3%)
 Frame = -2

Query: 964 EPEADPERDQRTVFAYQISLKADERDVYEFFSRVGKVRDVRLIMDRITKRSKGVGYVEFY 785
           EPEADPERDQRTVFAYQI LKADERDVYEFFSR GKVRDVRLIMDR ++RSKGVGY+EFY
Sbjct: 27  EPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 86

Query: 784 DVMSVPMAIALSGQPLLGVPVMVKPSEAEKNLVQST---ASMTTXXXXXXXXXARKLYVG 614
           D MSVPMAIALSGQPLLG PVMVKPSEAEKNLVQST   A             AR+LYVG
Sbjct: 87  DAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVG 146

Query: 613 NLHLSIREDQLRQVFEAFGTVELVQLPTDLQTGQCKGFAFVQFARLEDAKAAQNLNGQLE 434
           NLH +I EDQLRQVFE FGTVELVQLPTDL+TG CKGF FVQFARLEDA+AAQ+LNGQL+
Sbjct: 147 NLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLD 206

Query: 433 IAGRVIKVSAVTDQTGGQDIGVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIXXXXX 254
           IAGR IKVS VTDQ G QDIG N                                     
Sbjct: 207 IAGRTIKVSVVTDQAGLQDIGANA----------------------------GDFDDDEG 238

Query: 253 XGLSLNASSRALLMQKLDRTGTASSFAGPFSSTASTAXXXXXXXXXXXGSNLAVSSLVAP 74
            GLSLNA SRA+LMQKLDR+GT    AG   S                G+   VS LVAP
Sbjct: 239 GGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAP 298

Query: 73  FGQ----------XXXXXXXXXXXPAMDTVGVPS 2
             Q                     P++DT+GVPS
Sbjct: 299 LVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPS 332


>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score =  323 bits (827), Expect = 5e-86
 Identities = 182/273 (66%), Positives = 200/273 (73%), Gaps = 3/273 (1%)
 Frame = -2

Query: 964 EPEADPERDQRTVFAYQISLKADERDVYEFFSRVGKVRDVRLIMDRITKRSKGVGYVEFY 785
           EPEADPERDQRTVFAYQISLKADERDVYEFFSR GKVRDVRLIMDR ++RSKGVGY+EFY
Sbjct: 213 EPEADPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 272

Query: 784 DVMSVPMAIALSGQPLLGVPVMVKPSEAEKNLVQSTASMT---TXXXXXXXXXARKLYVG 614
           DVMSVPMAIALSGQPLLG PVMVKPSEAEKNLVQST S+    T         ARKLYVG
Sbjct: 273 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVG 332

Query: 613 NLHLSIREDQLRQVFEAFGTVELVQLPTDLQTGQCKGFAFVQFARLEDAKAAQNLNGQLE 434
           NLH+SI E  +R+VFEAFG VELVQLP D ++G CKGF FVQFARLEDA+ AQ+LNGQLE
Sbjct: 333 NLHVSITEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQSLNGQLE 391

Query: 433 IAGRVIKVSAVTDQTGGQDIGVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIXXXXX 254
           I GR IKVSAVTDQ+G Q++G NT                                    
Sbjct: 392 IGGRTIKVSAVTDQSGMQEVGGNT----------------------------GDFDDDEG 423

Query: 253 XGLSLNASSRALLMQKLDRTGTASSFAGPFSST 155
            GLSLNA SRA+LMQKLDR+GTASS  G   ++
Sbjct: 424 GGLSLNACSRAILMQKLDRSGTASSMVGSIGNS 456


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
            gi|223544486|gb|EEF46005.1| splicing factor, putative
            [Ricinus communis]
          Length = 609

 Score =  323 bits (827), Expect = 5e-86
 Identities = 193/330 (58%), Positives = 216/330 (65%), Gaps = 9/330 (2%)
 Frame = -2

Query: 964  EPEADPERDQRTVFAYQISLKADERDVYEFFSRVGKVRDVRLIMDRITKRSKGVGYVEFY 785
            EPEADPERDQRTVFAYQI LKADERDVYEFFSR GKVRDVRLIMDR ++RSKGVGY+EFY
Sbjct: 216  EPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 275

Query: 784  DVMSVPMAIALSGQPLLGVPVMVKPSEAEKNLVQSTASMTTXXXXXXXXXARKLYVGNLH 605
            DVMSVPMAIALSGQPLLG PVMVKPSEAEKNLVQST ++           AR+LYVGNLH
Sbjct: 276  DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTTVNA-GSGPYSGGARRLYVGNLH 334

Query: 604  LSIREDQLRQVFEAFGTVELVQLPTDLQTGQCKGFAFVQFARLEDAKAAQNLNGQLEIAG 425
             +I EDQLRQVFE FG VELVQLP D +TG CKGF FVQFARLEDAK A NLNGQ+EIAG
Sbjct: 335  FNITEDQLRQVFEPFGIVELVQLPLD-ETGHCKGFGFVQFARLEDAKNALNLNGQVEIAG 393

Query: 424  RVIKVSAVTDQTGGQDIGVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIXXXXXXGL 245
            R IKVS VTDQTG QD   N                                      GL
Sbjct: 394  RPIKVSTVTDQTGMQDSTTNA----------------------------GDFDDDEGGGL 425

Query: 244  SLNASSRALLMQKLDRTGTASSFAGPFSSTASTAXXXXXXXXXXXGSNLAVSSLVAPF-- 71
            +LNA SRA+LMQKLDR+GTASS AG   ++A++             + + +  +VAP   
Sbjct: 426  ALNARSRAILMQKLDRSGTASSIAGSLGTSAASTGLAVPTAPILGAAPV-IPPIVAPLIS 484

Query: 70   -------GQXXXXXXXXXXXPAMDTVGVPS 2
                   G            P++DT+GVPS
Sbjct: 485  GSAPAFPGLPGASVQLPGAIPSVDTIGVPS 514


>ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
          Length = 551

 Score =  316 bits (809), Expect = 6e-84
 Identities = 179/262 (68%), Positives = 194/262 (74%)
 Frame = -2

Query: 964 EPEADPERDQRTVFAYQISLKADERDVYEFFSRVGKVRDVRLIMDRITKRSKGVGYVEFY 785
           EPEADPERDQRTVFA+Q+SLKADERDVYEFFSR GKVRDVRLIMDR ++RSKGVGY+EFY
Sbjct: 170 EPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 229

Query: 784 DVMSVPMAIALSGQPLLGVPVMVKPSEAEKNLVQSTASMTTXXXXXXXXXARKLYVGNLH 605
           DVMSVPMAIALSGQ LLG PVMVKPSEAEKNLVQS+A+ +          ARKLYVGNLH
Sbjct: 230 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSSATSSV----AASGGARKLYVGNLH 285

Query: 604 LSIREDQLRQVFEAFGTVELVQLPTDLQTGQCKGFAFVQFARLEDAKAAQNLNGQLEIAG 425
            +I EDQLRQVFE FG VELVQLP D  TG CKGF FVQFARLEDAKAAQ+LNGQL+IAG
Sbjct: 286 ANITEDQLRQVFEPFGLVELVQLPVDPLTGLCKGFGFVQFARLEDAKAAQSLNGQLDIAG 345

Query: 424 RVIKVSAVTDQTGGQDIGVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIXXXXXXGL 245
           RVIKVSAVTDQ G Q  G  T                              +      GL
Sbjct: 346 RVIKVSAVTDQAGVQVSGATT----------------------------GDLDDDEGGGL 377

Query: 244 SLNASSRALLMQKLDRTGTASS 179
           +LNASSRALLMQKLDR+G  +S
Sbjct: 378 ALNASSRALLMQKLDRSGVTTS 399