BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005087
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18893.3| unnamed protein product [Vitis vinifera]              279   9e-73
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...   273   5e-71
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...   260   5e-67
ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|2...   253   4e-65
ref|NP_173466.2| Pseudouridine synthase family protein [Arabidop...   239   6e-61

>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  279 bits (713), Expect = 9e-73
 Identities = 165/355 (46%), Positives = 214/355 (60%), Gaps = 18/355 (5%)
 Frame = +2

Query: 41   MGGRQEADVLK-AVGSLPINAVKDLVSLGVCHRCILSLFGCYDCICSSPSIPTSALARAF 217
            + G  +  +L  AV  +  +AVKDL+SLG+C  CI  L G    I S PS+  S L    
Sbjct: 61   IAGEDDMRILNDAVSKVSPHAVKDLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVI 120

Query: 218  NQVLPQGDYADQ----VCSVCLGILQFAYMDNNGVFVKNESASELAATIIT-----DHQL 370
            +          +    +CS+CLG+LQF Y D+  + VK +SA ELA +I        H+ 
Sbjct: 121  DSGAAHSSQESECEPVICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEF 180

Query: 371  DTFALQVSIPPLVLDNQKAVWLYIKTKWSSQLEFLE--LSK--STKDVFKMAITNTLETS 538
            D F+L+VSIPP++ +N+  V LY+K K+ S+L F E  LS+  S KD  K+++ N LE  
Sbjct: 181  DNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKL 240

Query: 539  LGVKSTETS-FQIRLTYTLAHTSASTQDTSDTNGFSKRRKTGNVEGIRTVQSCTAAGEAS 715
            L VKS+ +S F+IRLTY     S   Q+ ++ +   KRR+TG      TV      G   
Sbjct: 241  LDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIEC 300

Query: 716  ADGLKKYIDSEAVSNELQVQGINN---FKIPLEKVNQPCCLTYLCYRNPIFIGGRYLKFS 886
            +D      D+        +Q   N   FK PLEKVNQPC L +LCYR  I+IGGRYLK+S
Sbjct: 301  SDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKYS 360

Query: 887  RNVSQSRWIIDDERMGEASVEEIIGNIVLPMSKGDTYKFHAAGREDIDVRMLGTG 1051
            RNVSQ+RWIIDDERMGEASVEEIIG  +LPM  GD YKFHAAGREDI+VRMLG+G
Sbjct: 361  RNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSG 415


>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
            vinifera]
          Length = 578

 Score =  273 bits (698), Expect = 5e-71
 Identities = 167/373 (44%), Positives = 219/373 (58%), Gaps = 36/373 (9%)
 Frame = +2

Query: 41   MGGRQEADVLK-AVGSLPINAVKDLVSLGVCHRCILSLFGCYDCICSSPSI--------- 190
            + G  +  +L  AV  +  +AVKDL+SLG+C  CI  L G    I S PS+         
Sbjct: 30   IAGEDDMRILNDAVSKVSPHAVKDLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVI 89

Query: 191  --PTSALARAFNQVLPQGD----YADQ-------VCSVCLGILQFAYMDNNGVFVKNESA 331
              PT +    +  +    D    ++ Q       +CS+CLG+LQF Y D+  + VK +SA
Sbjct: 90   GEPTDSSTHRYTGIGGNEDSGAAHSSQESECEPVICSICLGVLQFTYFDDKKMLVKKDSA 149

Query: 332  SELAATIIT-----DHQLDTFALQVSIPPLVLDNQKAVWLYIKTKWSSQLEFLE--LSK- 487
             ELA +I        H+ D F+L+VSIPP++ +N+  V LY+K K+ S+L F E  LS+ 
Sbjct: 150  DELAVSIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQEKFLSER 209

Query: 488  -STKDVFKMAITNTLETSLGVKSTETS-FQIRLTYTLAHTSASTQDTSDTNGFSKRRKTG 661
             S KD  K+++ N LE  L VKS+ +S F+IRLTY     S   Q+ ++ +   KRR+TG
Sbjct: 210  ISAKDALKLSLCNPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTG 269

Query: 662  NVEGIRTVQSCTAAGEASADGLKKYIDSEAVSNELQVQGINN---FKIPLEKVNQPCCLT 832
                  TV      G   +D      D+        +Q   N   FK PLEKVNQPC L 
Sbjct: 270  TENIFSTVHGSVVDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLA 329

Query: 833  YLCYRNPIFIGGRYLKFSRNVSQSRWIIDDERMGEASVEEIIGNIVLPMSKGDTYKFHAA 1012
            +LCYR  I+IGGRYLK+SRNVSQ+RWIIDDERMGEASVEEIIG  +LPM  GD YKFHAA
Sbjct: 330  FLCYRTHIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAA 389

Query: 1013 GREDIDVRMLGTG 1051
            GREDI+VRMLG+G
Sbjct: 390  GREDINVRMLGSG 402


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
            gi|223551325|gb|EEF52811.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 565

 Score =  260 bits (664), Expect = 5e-67
 Identities = 156/354 (44%), Positives = 208/354 (58%), Gaps = 27/354 (7%)
 Frame = +2

Query: 71   KAVGSLPINAVKDLVSLGVCHRCILSLFGCYDCICSSPSIPTSALARAFNQ--------- 223
            +AV SLP +AVK L+  G+C RCI  L G    I  +  +  S +     +         
Sbjct: 40   EAVRSLPSHAVKGLLRNGICMRCIFRLLGVQGHIFFTYPLSRSLMHNILGESWKDDEDMK 99

Query: 224  ---VLPQGDYADQVCSVCLGILQFAYMDNNGVFVKNESASELAATIIT-----DHQLDTF 379
                  +     ++C+VCLGILQF + D+ GV VK  +A  L  +I        HQ+D+F
Sbjct: 100  GCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVNLCVSIAELIKQEGHQIDSF 159

Query: 380  ALQVSIPPLVLDNQKAVWLYIKTKWSSQLEFLE-LSKS--TKDVFKMAITNTLETSLGVK 550
            +L+VSI P++ +N++ + LY++ K+ S+L F E +SK   TK+  K AI N LE  L VK
Sbjct: 160  SLEVSIAPIIQENERVIRLYMERKYRSELWFQESVSKCICTKEALKFAIANPLERMLDVK 219

Query: 551  STETSFQIRLTYTLAHTSASTQDTSDTNGFSKRRKTGNVEGIRTVQS--CTAAGEASADG 724
            S  +S +IRLTYT A  S    ++       KRRKTG  +   +V +    A        
Sbjct: 220  SGPSSCRIRLTYTQAKPSGIAPNSVPGGEGCKRRKTGITDAPESVNNELINARNGCFDSS 279

Query: 725  LKKYIDSEAVSNELQVQGINNFK-----IPLEKVNQPCCLTYLCYRNPIFIGGRYLKFSR 889
            + K IDS    +E    G+ N +      P EKV +PC L +LCYR PI+ GGRYLKFSR
Sbjct: 280  MYKGIDS----SESSFCGLENHESSECIFPKEKVKEPCNLLFLCYRTPIYFGGRYLKFSR 335

Query: 890  NVSQSRWIIDDERMGEASVEEIIGNIVLPMSKGDTYKFHAAGREDIDVRMLGTG 1051
            NVSQ+RWIIDDERMGEAS+EEIIG  + PM +GD+YKFHAAGREDIDVRMLG+G
Sbjct: 336  NVSQTRWIIDDERMGEASIEEIIGGSIFPMCQGDSYKFHAAGREDIDVRMLGSG 389


>ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|222857212|gb|EEE94759.1|
            predicted protein [Populus trichocarpa]
          Length = 520

 Score =  253 bits (647), Expect = 4e-65
 Identities = 160/343 (46%), Positives = 204/343 (59%), Gaps = 17/343 (4%)
 Frame = +2

Query: 74   AVGSLPINAVKDLVSLGVCHRCILSLFGCYDCICSSPSIPTSALARAFNQVLPQGDYADQ 253
            AV SLP +AVKDL+S G                 SS S+              + +   +
Sbjct: 41   AVRSLPSHAVKDLLSAG-------------GDSSSSESM--------------ESELKPE 73

Query: 254  VCSVCLGILQFAYMDNNGVFVKNESASELAATIIT-----DHQLDTFALQVSIPPLVLDN 418
            VC +CLGILQF Y D   + VK ++  ELAA+I        HQ+D F+L+VSIPP++ +N
Sbjct: 74   VCRICLGILQFIYRDEKEMLVKRKNGDELAASIAELTRQEGHQIDGFSLEVSIPPIIFEN 133

Query: 419  QKAVWLYIKTKWSSQLEFLE-LSK--STKDVFKMAITNTLETSLGVKSTETSFQIRLTYT 589
            ++AV LY+K K+ S+L F E LS+  STKD  K AI N LE  L VKS  +  +IRLTYT
Sbjct: 134  EQAVRLYMKKKYGSELWFQERLSECISTKDALKFAIVNPLEIILDVKSGPSYVRIRLTYT 193

Query: 590  LAHTSASTQDTSDTNGFSKRR-KTGNVEGIRTVQSC--------TAAGEASADGLKKYID 742
                S     + D NG +     T +VE +     C        + A   S+ GL ++  
Sbjct: 194  ETKPSIIPSKSVDRNGGTNNGLDTVHVELVGNGTGCCDLSLGQGSPASGRSSTGLAEHES 253

Query: 743  SEAVSNELQVQGINNFKIPLEKVNQPCCLTYLCYRNPIFIGGRYLKFSRNVSQSRWIIDD 922
            SE           +NF  PLE+VN+PC L +LCYR PI+ GGRYLKFSRNVSQ+RWIIDD
Sbjct: 254  SEC----------SNF--PLERVNEPCHLVFLCYRTPIYFGGRYLKFSRNVSQTRWIIDD 301

Query: 923  ERMGEASVEEIIGNIVLPMSKGDTYKFHAAGREDIDVRMLGTG 1051
            ERMGEAS+EEIIG  +LPM +GD+YKFHAAGREDIDVRMLG+G
Sbjct: 302  ERMGEASIEEIIGGNILPMCQGDSYKFHAAGREDIDVRMLGSG 344


>ref|NP_173466.2| Pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|332191849|gb|AEE29970.1| Pseudouridine synthase family
            protein [Arabidopsis thaliana]
          Length = 504

 Score =  239 bits (611), Expect = 6e-61
 Identities = 153/355 (43%), Positives = 198/355 (55%), Gaps = 10/355 (2%)
 Frame = +2

Query: 17   GSPSPYEKMGGRQEADVLKAVGSLPINAVKDLVSLGVCHRCILSLFG--CYDCICSSPSI 190
            G P+     G  +   V +   SL   AVKDL+SLGVC RCI  L     +D   SS S 
Sbjct: 14   GLPNGLVSHGNSKTRRVYETARSLHTGAVKDLLSLGVCERCIFRLVSVEAFDSDISSVST 73

Query: 191  PT--SALARAFNQVLPQGDYADQVCSVCLGILQFAYMDNNGVFVKNESASELAATIITD- 361
             T  S L    ++          +C VCLGILQF + D     VK++S+S+  A I TD 
Sbjct: 74   STLRSWLKSGDDETSASESSCSTICIVCLGILQFVFSDVKKELVKSDSSSDYVARI-TDL 132

Query: 362  -----HQLDTFALQVSIPPLVLDNQKAVWLYIKTKWSSQLEFLELSKSTKDVFKMAITNT 526
                 H+ D+F L+VS+P  +++N++A+  Y+K K+S+++       S KD  K+ + + 
Sbjct: 133  VKQDRHEFDSFGLEVSVPSTIMENERALLSYLKGKYSTEVWLQRDKISVKDALKVLLLDQ 192

Query: 527  LETSLGVKSTETSFQIRLTYTLAHTSASTQDTSDTNGFSKRRKTGNVEGIRTVQSCTAAG 706
            L+ SLG +S  +SF IRLTYT A   A  Q  S+T   SKRRKT                
Sbjct: 193  LKASLGAESDSSSFHIRLTYTKASDEA--QGASETTHESKRRKT---------------- 234

Query: 707  EASADGLKKYIDSEAVSNELQVQGINNFKIPLEKVNQPCCLTYLCYRNPIFIGGRYLKFS 886
                       D+E  SN +     N+F    EKV +PC  +  C R PIF  GRY K+S
Sbjct: 235  -----------DAENGSNCISE---NSF----EKVYEPCIFSVHCNRMPIFFSGRYFKYS 276

Query: 887  RNVSQSRWIIDDERMGEASVEEIIGNIVLPMSKGDTYKFHAAGREDIDVRMLGTG 1051
            RNVSQSRWIIDDERMGEASVEEI+G  +LP   GD+YKFHAAGREDIDVRMLG+G
Sbjct: 277  RNVSQSRWIIDDERMGEASVEEILGGNILPACLGDSYKFHAAGREDIDVRMLGSG 331