BLASTX nr result

ID: Lithospermum22_contig00005085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005085
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031514.2| PsbP-like protein 2 [Arabidopsis thaliana] g...   160   8e-37
ref|NP_001078022.1| PsbP-like protein 2 [Arabidopsis thaliana] g...   160   8e-37
ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplasti...   159   1e-36
ref|NP_565906.1| PsbP-like protein 2 [Arabidopsis thaliana] gi|7...   156   1e-35
ref|XP_002879800.1| photosystem II reaction center PsbP family p...   155   3e-35

>ref|NP_001031514.2| PsbP-like protein 2 [Arabidopsis thaliana]
           gi|330254589|gb|AEC09683.1| PsbP-like protein 2
           [Arabidopsis thaliana]
          Length = 230

 Score =  160 bits (404), Expect = 8e-37
 Identities = 78/139 (56%), Positives = 94/139 (67%)
 Frame = +1

Query: 208 PSITIKASMQLPQSSITGDGEGNFKRRXXXXXXXXXXXXXXXXTSIFAEEIPESYSAFVD 387
           P+ ++KA   L   +       N+KRR                T + AEEIP+SYS FVD
Sbjct: 26  PNPSLKACCLLSSGAYQKGSGNNWKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVD 85

Query: 388 KRDGYSYVYPSDWREFDFRGHDSAFKDRYLQLQNVRLSFIPTENSDIHDLGPLSEVVPQL 567
           + DGYSY YPSDWREFDFR HDSAFKDRYLQLQNVR+ FIPTE +DIH++GP+ EVV  L
Sbjct: 86  REDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDL 145

Query: 568 VKHVYAAPNQIVDIMEMKE 624
           VKH +AAPNQ+  I +MKE
Sbjct: 146 VKHKFAAPNQVATIYDMKE 164



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 44/72 (61%), Positives = 60/72 (83%)
 Frame = +3

Query: 777 IMEMKEKIVDGKSYCTFEYVLTSPNFARSAFATIAIANGRFYTLIVGANERRWRKVRNKM 956
           I +MKE++ DGK+Y TFEY L +P +A ++FAT+A+ N R+YTLIVGANERRWRKV+ ++
Sbjct: 159 IYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQL 218

Query: 957 KVVADSFKVLDI 992
           +VVADS K+L I
Sbjct: 219 QVVADSLKILQI 230


>ref|NP_001078022.1| PsbP-like protein 2 [Arabidopsis thaliana]
           gi|330254590|gb|AEC09684.1| PsbP-like protein 2
           [Arabidopsis thaliana]
          Length = 174

 Score =  160 bits (404), Expect = 8e-37
 Identities = 78/139 (56%), Positives = 94/139 (67%)
 Frame = +1

Query: 208 PSITIKASMQLPQSSITGDGEGNFKRRXXXXXXXXXXXXXXXXTSIFAEEIPESYSAFVD 387
           P+ ++KA   L   +       N+KRR                T + AEEIP+SYS FVD
Sbjct: 26  PNPSLKACCLLSSGAYQKGSGNNWKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVD 85

Query: 388 KRDGYSYVYPSDWREFDFRGHDSAFKDRYLQLQNVRLSFIPTENSDIHDLGPLSEVVPQL 567
           + DGYSY YPSDWREFDFR HDSAFKDRYLQLQNVR+ FIPTE +DIH++GP+ EVV  L
Sbjct: 86  REDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDL 145

Query: 568 VKHVYAAPNQIVDIMEMKE 624
           VKH +AAPNQ+  I +MKE
Sbjct: 146 VKHKFAAPNQVATIYDMKE 164


>ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplastic [Vitis vinifera]
           gi|296086288|emb|CBI31729.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  159 bits (402), Expect = 1e-36
 Identities = 77/124 (62%), Positives = 90/124 (72%)
 Frame = +1

Query: 262 DGEGNFKRRXXXXXXXXXXXXXXXXTSIFAEEIPESYSAFVDKRDGYSYVYPSDWREFDF 441
           D E + +RR                +S+ AEEIP +Y AFVD  DGYSY YP DWREF+F
Sbjct: 49  DEESHLERRSLLLGVGLLAANLFPASSLHAEEIPANYKAFVDLSDGYSYYYPLDWREFEF 108

Query: 442 RGHDSAFKDRYLQLQNVRLSFIPTENSDIHDLGPLSEVVPQLVKHVYAAPNQIVDIMEMK 621
           RGHDSAFKDRYLQLQNVR+SFIPT+  DIHDLGP+ EVVP LVK+VYAAPNQI  I++M+
Sbjct: 109 RGHDSAFKDRYLQLQNVRVSFIPTDKRDIHDLGPMEEVVPNLVKNVYAAPNQIATILDMQ 168

Query: 622 EVYV 633
           E  V
Sbjct: 169 EKVV 172



 Score =  110 bits (276), Expect = 6e-22
 Identities = 51/72 (70%), Positives = 64/72 (88%)
 Frame = +3

Query: 777 IMEMKEKIVDGKSYCTFEYVLTSPNFARSAFATIAIANGRFYTLIVGANERRWRKVRNKM 956
           I++M+EK+VDGK+Y T EY LTS NF+R++F  +AI NGRFYTL VGANERRW++VRNK+
Sbjct: 164 ILDMQEKVVDGKNYYTVEYELTSANFSRASFVILAIGNGRFYTLNVGANERRWKRVRNKL 223

Query: 957 KVVADSFKVLDI 992
           KVVADSFKVLD+
Sbjct: 224 KVVADSFKVLDM 235


>ref|NP_565906.1| PsbP-like protein 2 [Arabidopsis thaliana]
           gi|75099839|sp|O80634.2|PPL2_ARATH RecName:
           Full=PsbP-like protein 2, chloroplastic; Flags:
           Precursor gi|14532688|gb|AAK64145.1| unknown protein
           [Arabidopsis thaliana] gi|20197110|gb|AAC27838.2| PsbP
           domain protein, putative [Arabidopsis thaliana]
           gi|21553760|gb|AAM62853.1| unknown [Arabidopsis
           thaliana] gi|22136776|gb|AAM91732.1| unknown protein
           [Arabidopsis thaliana] gi|330254588|gb|AEC09682.1|
           PsbP-like protein 2 [Arabidopsis thaliana]
          Length = 238

 Score =  156 bits (394), Expect = 1e-35
 Identities = 74/117 (63%), Positives = 86/117 (73%)
 Frame = +1

Query: 274 NFKRRXXXXXXXXXXXXXXXXTSIFAEEIPESYSAFVDKRDGYSYVYPSDWREFDFRGHD 453
           N+KRR                T + AEEIP+SYS FVD+ DGYSY YPSDWREFDFR HD
Sbjct: 56  NWKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHD 115

Query: 454 SAFKDRYLQLQNVRLSFIPTENSDIHDLGPLSEVVPQLVKHVYAAPNQIVDIMEMKE 624
           SAFKDRYLQLQNVR+ FIPTE +DIH++GP+ EVV  LVKH +AAPNQ+  I +MKE
Sbjct: 116 SAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 172



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 44/72 (61%), Positives = 60/72 (83%)
 Frame = +3

Query: 777 IMEMKEKIVDGKSYCTFEYVLTSPNFARSAFATIAIANGRFYTLIVGANERRWRKVRNKM 956
           I +MKE++ DGK+Y TFEY L +P +A ++FAT+A+ N R+YTLIVGANERRWRKV+ ++
Sbjct: 167 IYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQL 226

Query: 957 KVVADSFKVLDI 992
           +VVADS K+L I
Sbjct: 227 QVVADSLKILQI 238


>ref|XP_002879800.1| photosystem II reaction center PsbP family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297325639|gb|EFH56059.1|
           photosystem II reaction center PsbP family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  155 bits (391), Expect = 3e-35
 Identities = 81/158 (51%), Positives = 100/158 (63%), Gaps = 9/158 (5%)
 Frame = +1

Query: 178 SSMNVHMLQPPSITIKASMQLPQSSITG--------DGEG-NFKRRXXXXXXXXXXXXXX 330
           SS+++     P+I+ K  +  P  S+           G G N+KRR              
Sbjct: 5   SSLSIRYGVSPTISHKTEILCPNPSLKACLLSSAYQKGSGSNWKRRQALVGVGTLVATSI 64

Query: 331 XXTSIFAEEIPESYSAFVDKRDGYSYVYPSDWREFDFRGHDSAFKDRYLQLQNVRLSFIP 510
               + AEEIP+SYS FVD+ DGYSY YPSDWREFDFR HDSAFKDRYLQLQNVR+ FIP
Sbjct: 65  PAALLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIP 124

Query: 511 TENSDIHDLGPLSEVVPQLVKHVYAAPNQIVDIMEMKE 624
           TE +DI ++GP+ EVV  LVKH +AAPNQ+  I +MKE
Sbjct: 125 TEKNDIREVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 162



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 43/72 (59%), Positives = 61/72 (84%)
 Frame = +3

Query: 777 IMEMKEKIVDGKSYCTFEYVLTSPNFARSAFATIAIANGRFYTLIVGANERRWRKVRNKM 956
           I +MKE++ DG++Y TFEY L +P +A ++FAT+A+ N R+YTLIVGANERRWRKV+ ++
Sbjct: 157 IYDMKERVEDGRNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQL 216

Query: 957 KVVADSFKVLDI 992
           +VVADS K+L+I
Sbjct: 217 QVVADSLKILEI 228


Top