BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005077
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198917.1| DNA-directed RNA Polymerase II subunit K [Arabi...   100   3e-19
ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I...   100   5e-19
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I...    99   1e-18
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp....    99   1e-18
ref|XP_002317630.1| predicted protein [Populus trichocarpa] gi|3...    98   2e-18

>ref|NP_198917.1| DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana]
           gi|9759147|dbj|BAB09703.1| unnamed protein product
           [Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
           unknown protein [Arabidopsis thaliana]
           gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
           thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
           polymerase II polypeptide K [Arabidopsis thaliana]
           gi|332007242|gb|AED94625.1| DNA-directed RNA Polymerase
           II subunit K [Arabidopsis thaliana]
          Length = 51

 Score =  100 bits (249), Expect = 3e-19
 Identities = 44/49 (89%), Positives = 46/49 (93%)
 Frame = +2

Query: 146 MDAQPEPVTYICGDCGQENTLKSQDVIQCRECGYRILYKKRTRRIVQYE 292
           MD  PEPVTY+CGDCGQENTLKS DVIQCRECGYRILYKKRTRR+VQYE
Sbjct: 1   MDPAPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYE 49


>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Vitis vinifera]
           gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4 [Vitis
           vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
           product [Vitis vinifera]
          Length = 51

 Score =  100 bits (248), Expect = 5e-19
 Identities = 45/49 (91%), Positives = 46/49 (93%)
 Frame = +2

Query: 146 MDAQPEPVTYICGDCGQENTLKSQDVIQCRECGYRILYKKRTRRIVQYE 292
           MD QPEPV+YICGDCGQENTLK  DVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 49


>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Cucumis sativus]
           gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Cucumis sativus]
          Length = 51

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = +2

Query: 146 MDAQPEPVTYICGDCGQENTLKSQDVIQCRECGYRILYKKRTRRIVQYE 292
           MD QPEPV+YICGDCG ENTLK  DVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYE 49


>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316495|gb|EFH46918.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 52

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 152 AQPEPVTYICGDCGQENTLKSQDVIQCRECGYRILYKKRTRRIVQYE 292
           AQPEPVTY+CGDCGQENTLK  DVIQCRECGYRILYKKRTRR+VQYE
Sbjct: 4   AQPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYE 50


>ref|XP_002317630.1| predicted protein [Populus trichocarpa]
           gi|356531072|ref|XP_003534102.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Glycine max] gi|356560019|ref|XP_003548293.1|
           PREDICTED: DNA-directed RNA polymerases I, II, and III
           subunit RPABC4 [Glycine max] gi|222860695|gb|EEE98242.1|
           predicted protein [Populus trichocarpa]
           gi|255630274|gb|ACU15492.1| unknown [Glycine max]
          Length = 51

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = +2

Query: 146 MDAQPEPVTYICGDCGQENTLKSQDVIQCRECGYRILYKKRTRRIVQYE 292
           MD QPEPV+YICGDCG ENTLK  DVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 49