BLASTX nr result
ID: Lithospermum22_contig00005034
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00005034
(1849 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 410 e-129
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 416 e-128
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 403 e-127
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 403 e-126
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 408 e-126
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 410 bits (1055), Expect(2) = e-129
Identities = 210/446 (47%), Positives = 288/446 (64%)
Frame = +1
Query: 106 EPYLFKQANGSVEWRQAIQEEIAILEKNHTWEVVDLPTGHNPIGCKWIYKVKCKKDGSVE 285
EP +A G W++A+ E L KN TW +V G N I CKW+YKVK K DGS++
Sbjct: 923 EPQTLHEALGDKNWKEAMDSEYQALMKNKTWHLVPSKKGQNIIDCKWVYKVKRKADGSLD 982
Query: 286 RLKAKFVAKGYNQIDGVDYFDSFSHVAKMVTVKILLTMTAAKG*NLYQLDINNVFLYGFL 465
R KA+ VAKG+ Q G+DY D+F+ V K T++ +L++ ++G L QLD+ N FL+G L
Sbjct: 983 RYKARVVAKGFKQRYGIDYEDTFNPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVL 1042
Query: 466 DEDVYIDLPQGYNKAASPKVCHLKKSLYGLKQALRAWFNCLQEFLLSYGFLQSKADTSLF 645
+EDV++ P GY + VC L K+LYGLKQA RAW++ L L GF SK+DTSLF
Sbjct: 1043 EEDVFMRQPPGYEQKDG-YVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLF 1101
Query: 646 VFSRAGTCLVMLVYVDDILVTGNRLSDVNSFISTLCSRFVNRDLGEFNFFLGIEAVKQSD 825
+S+ + MLVYVDDI+V + + N+ + L F +DLG ++FLGIE VK+ +
Sbjct: 1102 FYSKGDVAMFMLVYVDDIIVASSSIDATNALLKNLNQEFALKDLGRLHYFLGIE-VKEVN 1160
Query: 826 GSLLLSQKQYMLDLLKKANMLNYKXXXXXXXXXXXXXXXXXXXXFASVDPTLYRQLVGSL 1005
++L+Q++Y +D+LK+ NM + K F D T YR LVG+L
Sbjct: 1161 NGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNP-FGPEDSTRYRSLVGAL 1219
Query: 1006 QYLTLTRLDLSYAVNRVCQHMHAPTAEHFGLVKRILRYVKSTIALGLIITPSRDFTIQAF 1185
QYLTLTR DLS++VN+VCQ++HAPT +H+ KRILRY+K T+ LGL I+ S + AF
Sbjct: 1220 QYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAF 1279
Query: 1186 SDADWAGFSSDRRSTGGYAVYLGSNIVSRQSKKQRTVTRSSTESEYKALANCSAEISWLV 1365
SDADWAG DR STGG+AV++G N+VS ++KQ TV+RSSTE+EYKALAN +AEI W+
Sbjct: 1280 SDADWAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQ 1339
Query: 1366 PLFGELHFSPSKSPILWCNNLGAMYL 1443
L EL K +WC+N+GA Y+
Sbjct: 1340 TLLHELGIQAPKIAKVWCDNIGAKYM 1365
Score = 80.9 bits (198), Expect(2) = e-129
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +3
Query: 1434 YVSANPICHARTKHIKIDFHFVLEKVAHKELQVQFISTKDQIADILTKPLRTTRFVFFRS 1613
Y++ANP+ HARTKHI++D+HFV E+VA K LQV++ISTKDQ+AD TK L + FR+
Sbjct: 1364 YMTANPVFHARTKHIEVDYHFVRERVARKFLQVEYISTKDQVADGFTKTLSVRQLEMFRN 1423
Query: 1614 KLRL 1625
L L
Sbjct: 1424 NLNL 1427
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 416 bits (1068), Expect(2) = e-128
Identities = 218/447 (48%), Positives = 289/447 (64%), Gaps = 1/447 (0%)
Frame = +1
Query: 106 EPYLFKQANGSVEWRQAIQEEIAILEKNHTWEVVDLPTGHNPIGCKWIYKVKCKKDGSVE 285
EPY +A G V W+ A+ E + L KN TW +V G N IGCKW+YK+K K DGS++
Sbjct: 804 EPYDLNEALGDVNWKDAMDIEYSALMKNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLD 863
Query: 286 RLKAKFVAKGYNQIDGVDYFDSFSHVAKMVTVKILLTMTAAKG*NLYQLDINNVFLYGFL 465
R KA+ VAKGY Q G+DY D+FS V K T++I+L++ ++G +L QLD+ N FL+G L
Sbjct: 864 RYKARLVAKGYKQQYGIDYDDTFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVL 923
Query: 466 DEDVYIDLPQGYNKAASPK-VCHLKKSLYGLKQALRAWFNCLQEFLLSYGFLQSKADTSL 642
+E+VY+ P GY + VC L K+LYGLKQA RAW++ L LLS GF SKADTSL
Sbjct: 924 EEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSL 983
Query: 643 FVFSRAGTCLVMLVYVDDILVTGNRLSDVNSFISTLCSRFVNRDLGEFNFFLGIEAVKQS 822
F +++ + +LVYVDDI+V + + +S L F +DLG+ N+FLGIE K
Sbjct: 984 FFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVR 1043
Query: 823 DGSLLLSQKQYMLDLLKKANMLNYKXXXXXXXXXXXXXXXXXXXXFASVDPTLYRQLVGS 1002
DG ++L+Q +Y DLLKK M + K D T YR +VG+
Sbjct: 1044 DG-IILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSP-LGEKDITQYRSIVGA 1101
Query: 1003 LQYLTLTRLDLSYAVNRVCQHMHAPTAEHFGLVKRILRYVKSTIALGLIITPSRDFTIQA 1182
LQYLTLTR D++++VN+VCQ +HAPT H+ VKRILRY+K LGL I S + A
Sbjct: 1102 LQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSA 1161
Query: 1183 FSDADWAGFSSDRRSTGGYAVYLGSNIVSRQSKKQRTVTRSSTESEYKALANCSAEISWL 1362
FSDADWAG DR+STGG+AV+LGSN+VS ++KQ TV+RSSTESEYKALAN +AE+ W+
Sbjct: 1162 FSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWV 1221
Query: 1363 VPLFGELHFSPSKSPILWCNNLGAMYL 1443
L E+ ++ LWC+NLGA YL
Sbjct: 1222 QILLTEISIKSPRAAKLWCDNLGAKYL 1248
Score = 72.0 bits (175), Expect(2) = e-128
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +3
Query: 1434 YVSANPICHARTKHIKIDFHFVLEKVAHKELQVQFISTKDQIADILTKPLRTTRFVFFRS 1613
Y+SANPI HARTKHI++D+HFV ++VA K L ++++ T DQ+AD TKPL F+
Sbjct: 1247 YLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLSVRLLENFKV 1306
Query: 1614 KLRL 1625
L L
Sbjct: 1307 NLNL 1310
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 403 bits (1035), Expect(2) = e-127
Identities = 209/446 (46%), Positives = 285/446 (63%)
Frame = +1
Query: 106 EPYLFKQANGSVEWRQAIQEEIAILEKNHTWEVVDLPTGHNPIGCKWIYKVKCKKDGSVE 285
EP +A G W++A+ E L KN TW V G N I CKW+YKVK K DGS++
Sbjct: 523 EPQTLHEALGDKNWKEAMDSEYQALMKNKTWHRVPSKKGQNIIDCKWVYKVKRKADGSLD 582
Query: 286 RLKAKFVAKGYNQIDGVDYFDSFSHVAKMVTVKILLTMTAAKG*NLYQLDINNVFLYGFL 465
R KA+ VAKG+ Q G+DY D+F V K T++ +L++ ++G L QLD+ N FL+G L
Sbjct: 583 RYKARLVAKGFKQRYGIDYEDTFRPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVL 642
Query: 466 DEDVYIDLPQGYNKAASPKVCHLKKSLYGLKQALRAWFNCLQEFLLSYGFLQSKADTSLF 645
+EDV++ P GY + VC L K+LYGLKQA RAW++ L L GF SK+DTSLF
Sbjct: 643 EEDVFMRQPPGYEQKDG-YVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLF 701
Query: 646 VFSRAGTCLVMLVYVDDILVTGNRLSDVNSFISTLCSRFVNRDLGEFNFFLGIEAVKQSD 825
+S+ + MLVYVDDI+V + + N+ + L F +DLG ++FLGIE + +D
Sbjct: 702 FYSKGDVTIFMLVYVDDIIVASSSIVATNALLKNLNQEFALKDLGRLHYFLGIEVKEVND 761
Query: 826 GSLLLSQKQYMLDLLKKANMLNYKXXXXXXXXXXXXXXXXXXXXFASVDPTLYRQLVGSL 1005
G ++L+Q++Y +D+LK+ NM + K D T YR LVG+L
Sbjct: 762 G-IVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNP-LGPEDSTRYRSLVGAL 819
Query: 1006 QYLTLTRLDLSYAVNRVCQHMHAPTAEHFGLVKRILRYVKSTIALGLIITPSRDFTIQAF 1185
QYLTLTR DLS++VN+VCQ++HA T +H+ KRILRY+K T+ LGL I+ S + AF
Sbjct: 820 QYLTLTRPDLSFSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSAF 879
Query: 1186 SDADWAGFSSDRRSTGGYAVYLGSNIVSRQSKKQRTVTRSSTESEYKALANCSAEISWLV 1365
SDADWAG DRRSTGG+AV++G N+VS ++KQ TV+RSSTE+EYKALAN +AEI W+
Sbjct: 880 SDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQ 939
Query: 1366 PLFGELHFSPSKSPILWCNNLGAMYL 1443
L EL K +WC+N+GA Y+
Sbjct: 940 TLLHELGIQVPKIAKVWCDNIGAKYM 965
Score = 80.9 bits (198), Expect(2) = e-127
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +3
Query: 1434 YVSANPICHARTKHIKIDFHFVLEKVAHKELQVQFISTKDQIADILTKPLRTTRFVFFRS 1613
Y++ANP+ HARTKHI++D+HFV E+VA K LQV++ISTKDQ+AD TK L + FR+
Sbjct: 964 YMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTKTLSVRQLEMFRN 1023
Query: 1614 KLRL 1625
L L
Sbjct: 1024 NLNL 1027
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 403 bits (1036), Expect(2) = e-126
Identities = 208/447 (46%), Positives = 286/447 (63%), Gaps = 1/447 (0%)
Frame = +1
Query: 106 EPYLFKQANGSVEWRQAIQEEIAILEKNHTWEVVDLPTGHNPIGCKWIYKVKCKKDGSVE 285
EP ++A + W++A+ E L +N TW +V G N I CKW+YKVK K DGS++
Sbjct: 306 EPQSLEEAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLD 365
Query: 286 RLKAKFVAKGYNQIDGVDYFDSFSHVAKMVTVKILLTMTAAKG*NLYQLDINNVFLYGFL 465
R KA+ VAKG+ Q G+DY D+FS V K T++I+L++ ++G +L QLD+ N FL+G L
Sbjct: 366 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVL 425
Query: 466 DEDVYIDLPQGYNKAASPK-VCHLKKSLYGLKQALRAWFNCLQEFLLSYGFLQSKADTSL 642
+E+VY++ P GY K + P VC L K+LYGLKQA RAW++ L L GF+ SKADTSL
Sbjct: 426 EEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSL 485
Query: 643 FVFSRAGTCLVMLVYVDDILVTGNRLSDVNSFISTLCSRFVNRDLGEFNFFLGIEAVKQS 822
F + + + +L+YVDDI++ + ++ + L F +DLG+ ++FLGIE K
Sbjct: 486 FFYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVK 545
Query: 823 DGSLLLSQKQYMLDLLKKANMLNYKXXXXXXXXXXXXXXXXXXXXFASVDPTLYRQLVGS 1002
DG L+LSQ++Y DLL++ M K D T YR +VG+
Sbjct: 546 DG-LMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTL-LGPQDSTQYRSVVGA 603
Query: 1003 LQYLTLTRLDLSYAVNRVCQHMHAPTAEHFGLVKRILRYVKSTIALGLIITPSRDFTIQA 1182
LQYLTLTR D+S+++N+VCQ +HAPT H+ VKRILRYVK T+ GL + +
Sbjct: 604 LQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSG 663
Query: 1183 FSDADWAGFSSDRRSTGGYAVYLGSNIVSRQSKKQRTVTRSSTESEYKALANCSAEISWL 1362
FSDADWAG DRRSTGG+AV+LG N+VS ++KQ TV+RSSTE+EYKALAN +AEI W+
Sbjct: 664 FSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWV 723
Query: 1363 VPLFGELHFSPSKSPILWCNNLGAMYL 1443
L EL ++ LWC+NLGA YL
Sbjct: 724 QTLLQELGVESPRAAKLWCDNLGAKYL 750
Score = 78.6 bits (192), Expect(2) = e-126
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = +3
Query: 1434 YVSANPICHARTKHIKIDFHFVLEKVAHKELQVQFISTKDQIADILTKPLRTTRFVFFRS 1613
Y+SANPI HARTKHI++DFHFV E+VA K L++ +ISTKDQ+AD TK + + F++
Sbjct: 749 YLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKN 808
Query: 1614 KLRL 1625
L L
Sbjct: 809 NLNL 812
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 408 bits (1048), Expect(2) = e-126
Identities = 213/452 (47%), Positives = 290/452 (64%), Gaps = 1/452 (0%)
Frame = +1
Query: 91 LSKIQEPYLFKQANGSVEWRQAIQEEIAILEKNHTWEVVDLPTGHNPIGCKWIYKVKCKK 270
L+ EP + A + W+ A+ E L KN+TW +V G N I CKW+YK+K K+
Sbjct: 917 LTSTGEPENLQDALQNNNWKCAMDAEYMALIKNNTWHLVPPQQGRNVIDCKWVYKIKRKQ 976
Query: 271 DGSVERLKAKFVAKGYNQIDGVDYFDSFSHVAKMVTVKILLTMTAAKG*NLYQLDINNVF 450
DGS++R KA+ VAKG+ Q G+DY D+FS V K T++I+L++ ++G L QLD+ N F
Sbjct: 977 DGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQLDVQNAF 1036
Query: 451 LYGFLDEDVYIDLPQGYNKAASPK-VCHLKKSLYGLKQALRAWFNCLQEFLLSYGFLQSK 627
L+G L+E+VY+ P GY ++P VC L K+LYGLKQA RAW++ L L GF SK
Sbjct: 1037 LHGVLEEEVYMKQPPGYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDLGFKGSK 1096
Query: 628 ADTSLFVFSRAGTCLVMLVYVDDILVTGNRLSDVNSFISTLCSRFVNRDLGEFNFFLGIE 807
ADTSLF +++ + +L+YVDDI+V +R V++ + L F +DLG+ ++FLGIE
Sbjct: 1097 ADTSLFFYNKGSLTIFLLIYVDDIIVVSSRKEAVSALLQDLQKEFALKDLGDLHYFLGIE 1156
Query: 808 AVKQSDGSLLLSQKQYMLDLLKKANMLNYKXXXXXXXXXXXXXXXXXXXXFASVDPTLYR 987
K G +L+SQ++Y DLLK+ NM + K + D T YR
Sbjct: 1157 VTK-IPGGILMSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPN-DATQYR 1214
Query: 988 QLVGSLQYLTLTRLDLSYAVNRVCQHMHAPTAEHFGLVKRILRYVKSTIALGLIITPSRD 1167
+VG+LQYLTLTRLD++++VN+VCQ +H PT EH+ VKRILRY+K LGL I S
Sbjct: 1215 SIVGALQYLTLTRLDIAFSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSS 1274
Query: 1168 FTIQAFSDADWAGFSSDRRSTGGYAVYLGSNIVSRQSKKQRTVTRSSTESEYKALANCSA 1347
+ +SDADWAG DRRSTGG+AVYLG N+VS +KKQ TV+RSSTE+EYKALAN +A
Sbjct: 1275 MIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATA 1334
Query: 1348 EISWLVPLFGELHFSPSKSPILWCNNLGAMYL 1443
EI W+ L EL+ LWC+N+GA YL
Sbjct: 1335 EIMWVQTLLQELNIVSPAMAQLWCDNMGAKYL 1366
Score = 72.8 bits (177), Expect(2) = e-126
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +3
Query: 1434 YVSANPICHARTKHIKIDFHFVLEKVAHKELQVQFISTKDQIADILTKPLRTTRFVFFRS 1613
Y+S NP+ HARTKHI++D+HFV E+VA K LQV ++ST DQ+AD TK L + F+
Sbjct: 1365 YLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKALPVKQLENFKY 1424
Query: 1614 KLRL 1625
L L
Sbjct: 1425 NLNL 1428