BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005028
         (1567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   447   e-123
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              444   e-122
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   403   e-110
ref|XP_002524432.1| transcription initiation factor ia, putative...   402   e-109
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   400   e-109

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  447 bits (1150), Expect = e-123
 Identities = 241/427 (56%), Positives = 295/427 (69%), Gaps = 4/427 (0%)
 Frame = +1

Query: 1    MLRLENGDLGPLVGRMMLVAIVDFLVSLDEQIPWDDIPEDDFTKGIFDMELGEFEGVGDD 180
            MLRLE G +  LVG MMLVA++D LV LD +I W+++ +DD +KGIF+MEL + E   DD
Sbjct: 211  MLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADD 270

Query: 181  VEHDSDEM-KESWIQKYLGGNKFAMKLDNLLVLIFDHLKLCCESGRLTQVFEILLQSFQK 357
            VE+D  E+ + S  +K LGGN  A KLD+L+VL F+HL+ C   GRL +VFE L+ SFQ 
Sbjct: 271  VENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQT 330

Query: 358  TVLPIYKSRFTQFVMFYACSLDPENCGKKFATMLLDVFM-NTVHPENRMSAVAYLASYLS 534
            TVL  +KS+F QFVMFYAC+LDPENCG +FA +L D F+ +T  P NRMSAVAYLASYLS
Sbjct: 331  TVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLS 390

Query: 535  RAKFVSASSVATMLGSLVDWCSDYCKNQDGGINPKVHKVFYAGCQAIMYVLCFRMRSMVL 714
            R KF++AS VA +L  LV WC +YCK  DG INPK H+VFY+GCQAIMYVLCFRMRSM+ 
Sbjct: 391  RGKFLTASFVANILERLVVWCLEYCKIHDGDINPKAHQVFYSGCQAIMYVLCFRMRSMMN 450

Query: 715  IPRXXXXXXXXNIGEILRHPLSPLKVCLPLIVEEFFHVVSEAQLFTFPEMQKADGSLESE 894
            +P          +  IL+HPLSPLKVCLP IVEEF      A+LFT  E       LESE
Sbjct: 451  VPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESE 510

Query: 895  LSRAFGGVEGLDMFFPFDPCLLKKSDSFIRPNYVYWSMVKSTPXXXXXXXXXXXXXXXXX 1074
            LSRAFGG+E LDMFFPFDPCLLKK D FIRPN+VYWSM+++T                  
Sbjct: 511  LSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDGEDSSDEEPAEDYEA 570

Query: 1075 XXXGIDMVDRG-GRSFENHAFD-DGFDRSFDAMSITPKESLLHKFVAKHSRMQMPSKIRP 1248
                  M D    RS+++H  + D FD S + MSITPK SL ++F     ++QMPS+IRP
Sbjct: 571  SHPDDVMNDDAMARSYDSHDLELDEFDHSMNKMSITPKNSLYYRF-GDELKVQMPSRIRP 629

Query: 1249 STSPESL 1269
            STSPESL
Sbjct: 630  STSPESL 636


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  444 bits (1143), Expect = e-122
 Identities = 239/425 (56%), Positives = 290/425 (68%), Gaps = 2/425 (0%)
 Frame = +1

Query: 1    MLRLENGDLGPLVGRMMLVAIVDFLVSLDEQIPWDDIPEDDFTKGIFDMELGEFEGVGDD 180
            MLRLE G +  LVG MMLVA++D LV LD +I W+++ +DD +KGIF+MEL + E   DD
Sbjct: 202  MLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADD 261

Query: 181  VEHDSDEM-KESWIQKYLGGNKFAMKLDNLLVLIFDHLKLCCESGRLTQVFEILLQSFQK 357
            VE+D  E+ + S  +K LGGN  A KLD+L+VL F+HL+ C   GRL +VFE L+ SFQ 
Sbjct: 262  VENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQT 321

Query: 358  TVLPIYKSRFTQFVMFYACSLDPENCGKKFATMLLDVFM-NTVHPENRMSAVAYLASYLS 534
            TVL  +KS+F QFVMFYAC+LDPENCG +FA +L D F+ +T  P NRMSAVAYLASYLS
Sbjct: 322  TVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLS 381

Query: 535  RAKFVSASSVATMLGSLVDWCSDYCKNQDGGINPKVHKVFYAGCQAIMYVLCFRMRSMVL 714
            R KF++AS VA +L  LV WC +YCK  DG INPK H+VFY+GCQAIMYVLCFRMRSM+ 
Sbjct: 382  RGKFLTASFVANILERLVVWCLEYCKIHDGDINPKAHQVFYSGCQAIMYVLCFRMRSMMN 441

Query: 715  IPRXXXXXXXXNIGEILRHPLSPLKVCLPLIVEEFFHVVSEAQLFTFPEMQKADGSLESE 894
            +P          +  IL+HPLSPLKVCLP IVEEF      A+LFT  E       LESE
Sbjct: 442  VPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESE 501

Query: 895  LSRAFGGVEGLDMFFPFDPCLLKKSDSFIRPNYVYWSMVKSTPXXXXXXXXXXXXXXXXX 1074
            LSRAFGG+E LDMFFPFDPCLLKK D FIRPN+VYWSM+++T                  
Sbjct: 502  LSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTT------------------ 543

Query: 1075 XXXGIDMVDRGGRSFENHAFDDGFDRSFDAMSITPKESLLHKFVAKHSRMQMPSKIRPST 1254
               G D  D         +  D FD S + MSITPK SL ++F     ++QMPS+IRPST
Sbjct: 544  YDDGEDSSDEEPAEDYEASHPDDFDHSMNKMSITPKNSLYYRF-GDELKVQMPSRIRPST 602

Query: 1255 SPESL 1269
            SPESL
Sbjct: 603  SPESL 607


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 626

 Score =  403 bits (1036), Expect = e-110
 Identities = 220/429 (51%), Positives = 277/429 (64%), Gaps = 8/429 (1%)
 Frame = +1

Query: 1    MLRLENGDLGPLVGRMMLVAIVDFLVSLDEQIPWDDIPEDDFTKGIFDMELGEFEGVGDD 180
            MLRLE G L   VGR +L A+VD L+ LD +I WDDI +DDF+KGIF+MEL + +   DD
Sbjct: 202  MLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDDTTDD 261

Query: 181  VEHDSDEMKESWIQKYLGGNKFAMKLDNLLVLIFDHLKLCCESGRLTQVFEILLQSFQKT 360
            +  DS E+     ++ LGGN  A  LD+L+VL F+HL+ C   GRL +VF+ILL SFQ+T
Sbjct: 262  INEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRT 321

Query: 361  VLPIYKSRFTQFVMFYACSLDPENCGKKFATMLLDVFMNTVHPEN-RMSAVAYLASYLSR 537
            VL  YKS+F QF++FYACSLDPE CG +FA  L D+F++   P   RMSAV+YLAS+LSR
Sbjct: 322  VLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSR 381

Query: 538  AKFVSASSVATMLGSLVDWCSDYCKNQDGGINPKVHKVFYAGCQAIMYVLCFRMRSMVLI 717
             KF++ S V T+L  LVDWC +Y K  +   NPK HKVFY+GCQAIMYVLCFRMRS++ I
Sbjct: 382  GKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEI 441

Query: 718  PRXXXXXXXXNIGEILRHPLSPLKVCLPLIVEEFFHVVSEAQLFTFPEMQKADGSLESEL 897
            PR         IG +L H LSPLKVCLP IVEEF      A LFT  E    +G LES+ 
Sbjct: 442  PRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDY 501

Query: 898  SRAFGGVEGLDMFFPFDPCLLKKSDSFIRPNYVYWSMVKSTPXXXXXXXXXXXXXXXXXX 1077
            SR+FGG+E LDMFFPFDPCLLKK D ++RP++VYWSMV+ T                   
Sbjct: 502  SRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYDEEEEEEEDDGGSSDEDA 561

Query: 1078 XXGIDMVDRG-------GRSFENHAFDDGFDRSFDAMSITPKESLLHKFVAKHSRMQMPS 1236
                D +D           S+++  FD   D   + MSITP+ SL ++       +QMPS
Sbjct: 562  EIFPDRIDENLMDDEAMAISYDDQDFD--LDSGLNKMSITPRNSLQYRC----DFVQMPS 615

Query: 1237 KIRPSTSPE 1263
            +IRPS SPE
Sbjct: 616  RIRPSMSPE 624


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
            gi|223536316|gb|EEF37967.1| transcription initiation
            factor ia, putative [Ricinus communis]
          Length = 640

 Score =  402 bits (1032), Expect = e-109
 Identities = 223/427 (52%), Positives = 273/427 (63%), Gaps = 4/427 (0%)
 Frame = +1

Query: 1    MLRLENGDLGPLVGRMMLVAIVDFLVSLDEQIPWDDIPEDDFTKGIFDMELGEFEGVGDD 180
            MLRLE+G +   VG  ML+A+VD L+ LD  I WDDI  DD  KGIF +EL + + V DD
Sbjct: 217  MLRLESGAIREFVGSRMLMAVVDKLIDLDVAIGWDDILRDDSCKGIFAIELEDADEVSDD 276

Query: 181  VEH-DSDEMKESWIQKYLGGNKFAMKLDNLLVLIFDHLKLCCESGRLTQVFEILLQSFQK 357
             E+ D  E+  +   K LG N  A  LD+L+V IF+HL+LC  + RL  VFE LL SF  
Sbjct: 277  DEYNDYGELPRTLSHKSLGENVAADLLDSLMVRIFEHLELCANNKRLNDVFETLLDSFML 336

Query: 358  TVLPIYKSRFTQFVMFYACSLDPENCGKKFATMLLDVFMNTVHPENRMSAVAYLASYLSR 537
            T+L  YKS+F QFVMFYAC+LDPENCG +FA  L D F    +P  RMSAVAYLASYL+R
Sbjct: 337  TILNTYKSKFAQFVMFYACALDPENCGVEFAERLRDRFTYGENPLTRMSAVAYLASYLAR 396

Query: 538  AKFVSASSVATMLGSLVDWCSDYCKNQDGGINPKVHKVFYAGCQAIMYVLCFRMRSMVLI 717
            AKF+  + VA+ L  LVDWCS+YC+NQDG +NPK H+VFY+GCQAI+YVLCFRM SM+ I
Sbjct: 397  AKFLPIAFVASTLKRLVDWCSEYCRNQDGDMNPKAHRVFYSGCQAILYVLCFRMSSMMDI 456

Query: 718  PRXXXXXXXXNIGEILRHPLSPLKVCLPLIVEEFFHVVSEAQLFTFPEMQKADGSLESEL 897
            P          + +I++H L PLKVCLP IVEEF      A LFT  +    +  LESE 
Sbjct: 457  PWLKSQLLHMPLEQIMKHKLGPLKVCLPSIVEEFLKQAKAAHLFTTSQTSSFEDVLESEF 516

Query: 898  SRAFGGVEGLDMFFPFDPCLLKKSD-SFIRPNYVYWSMVKSTPXXXXXXXXXXXXXXXXX 1074
            S+ FGG+E LDMFFPFDPCLL+  D SFIRPN+VYW  V++T                  
Sbjct: 517  SKDFGGLERLDMFFPFDPCLLRTCDRSFIRPNFVYWKDVRTTYGSDEEDSSDEDIAEDFT 576

Query: 1075 XXXGIDMVDRG-GRSFENHAFD-DGFDRSFDAMSITPKESLLHKFVAKHSRMQMPSKIRP 1248
               G   ++ G   S +    D D FD + + MSITPK     +F     RMQMPSKIRP
Sbjct: 577  DINGGSYMEEGMATSLDGQHLDLDEFDYAMNKMSITPKNRFGIRF---GERMQMPSKIRP 633

Query: 1249 STSPESL 1269
            STSPESL
Sbjct: 634  STSPESL 640


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  400 bits (1028), Expect = e-109
 Identities = 220/429 (51%), Positives = 277/429 (64%), Gaps = 8/429 (1%)
 Frame = +1

Query: 1    MLRLENGDLGPLVGRMMLVAIVDFLVSLDEQIPWDDIPEDDFTKGIFDMELGEFEGVGDD 180
            MLRLE G L   VGR +L A+VD L+ LD +I WDDI +DDF+KGIF+MEL + +   DD
Sbjct: 202  MLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDDTTDD 261

Query: 181  VEHDSDEMKESWIQKYLGGNKFAMKLDNLLVLIFDHLKLCCESGRLTQVFEILLQSFQKT 360
            +  DS E+     ++ LGGN  A  LD+L+VL F+HL+ C   GRL +VF+ILL SFQ+T
Sbjct: 262  INEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRT 321

Query: 361  VLPIYKSRFTQFVMFYACSLDPENCGKKFATMLLDVFMNTVHPEN-RMSAVAYLASYLSR 537
            VL  YKS+F QF++FYACSLDPE CG +FA  L D+F++   P   RMSAV+YLAS+LSR
Sbjct: 322  VLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSR 381

Query: 538  AKFVSASSVATMLGSLVDWCSDYCKNQDGGINPKVHKVFYAGCQAIMYVLCFRMRSMVLI 717
             KF++ S V T+L  LVDWC +Y K  +   NPK HKVFY+GCQAIMYVLCFRMRS++ I
Sbjct: 382  GKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEI 441

Query: 718  PRXXXXXXXXNIGEILRHPLSPLKVCLPLIVEEFFHVVSEAQLFTFPEMQKADGSLESEL 897
            PR         IG +L H LSPLKVCLP IVEEF      A LFT  E    +G LES+ 
Sbjct: 442  PRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDY 501

Query: 898  SRAFGGVEGLDMFFPFDPCLLKKSDSFIRPNYVYWSMVKSTPXXXXXXXXXXXXXXXXXX 1077
            SR+FGG+E LDMFFPFDPCLLKK D ++RP++VYWSMV+ T                   
Sbjct: 502  SRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYDEEEEEEDDGGSSDEDAE 561

Query: 1078 XXGIDMVDRG-------GRSFENHAFDDGFDRSFDAMSITPKESLLHKFVAKHSRMQMPS 1236
                D +D           S+++  FD   D   + MSITP+ SL ++       +QMPS
Sbjct: 562  IFP-DRIDENLMDDEAMAISYDDQDFD--LDSGLNKMSITPRNSLQYRC----DFVQMPS 614

Query: 1237 KIRPSTSPE 1263
            +IRPS SPE
Sbjct: 615  RIRPSMSPE 623