BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005027
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   357   3e-96
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              349   9e-94
ref|XP_002524432.1| transcription initiation factor ia, putative...   327   3e-87
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   321   3e-85
ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|2...   316   6e-84

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  357 bits (916), Expect = 3e-96
 Identities = 186/334 (55%), Positives = 230/334 (68%), Gaps = 5/334 (1%)
 Frame = +2

Query: 86   TFEHLKLCYKSGRLTQVFKILLRSFQTTVLTAYKSKFTQFVVFYACSLDPVKCGKKFATV 265
            TFEHL+ C   GRL +VF+ L+ SFQTTVL A+KSKF QFV+FYAC+LDP  CG +FA V
Sbjct: 304  TFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARV 363

Query: 266  LLNIFIYDIYP-LGRMIAVAYLASYLSRAVFMSASFVATMLECLAKWCSDYCKNQDRALN 442
            L + F+   +P L RM AVAYLASYLSR  F++ASFVA +LE L  WC +YCK  D  +N
Sbjct: 364  LADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGDIN 423

Query: 443  PELHKVFYAGCQAIMYLLCFRMRSMVXXXXXXXXXXXXXXXXXXMHPLSALKVCLPSIVK 622
            P+ H+VFY+GCQAIMY+LCFRMRSM+                   HPLS LKVCLPSIV+
Sbjct: 424  PKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVE 483

Query: 623  EFLHSVRETQLFVVPEKQEADELLESELSRAFGGVERLDMFFPFDPCLLRKSDSFIRPNF 802
            EFL   +  +LF V E     +LLESELSRAFGG+ERLDMFFPFDPCLL+K D FIRPNF
Sbjct: 484  EFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNF 543

Query: 803  VYWSMVKSTPDDDEEFSSDYDIAEVGADEGIDIVGG---GRSF*AHPFD-DEFGCSFDKM 970
            VYWSM+++T DD E+ S +    +  A    D++      RS+ +H  + DEF  S +KM
Sbjct: 544  VYWSMIRTTYDDGEDSSDEEPAEDYEASHPDDVMNDDAMARSYDSHDLELDEFDHSMNKM 603

Query: 971  SVTPKEYLLHKCASRNFHMQMPSKIRPSTSPESL 1072
            S+TPK  L ++       +QMPS+IRPSTSPESL
Sbjct: 604  SITPKNSLYYRFGD-ELKVQMPSRIRPSTSPESL 636


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  349 bits (895), Expect = 9e-94
 Identities = 183/330 (55%), Positives = 224/330 (67%), Gaps = 1/330 (0%)
 Frame = +2

Query: 86   TFEHLKLCYKSGRLTQVFKILLRSFQTTVLTAYKSKFTQFVVFYACSLDPVKCGKKFATV 265
            TFEHL+ C   GRL +VF+ L+ SFQTTVL A+KSKF QFV+FYAC+LDP  CG +FA V
Sbjct: 295  TFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARV 354

Query: 266  LLNIFIYDIYP-LGRMIAVAYLASYLSRAVFMSASFVATMLECLAKWCSDYCKNQDRALN 442
            L + F+   +P L RM AVAYLASYLSR  F++ASFVA +LE L  WC +YCK  D  +N
Sbjct: 355  LADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGDIN 414

Query: 443  PELHKVFYAGCQAIMYLLCFRMRSMVXXXXXXXXXXXXXXXXXXMHPLSALKVCLPSIVK 622
            P+ H+VFY+GCQAIMY+LCFRMRSM+                   HPLS LKVCLPSIV+
Sbjct: 415  PKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVE 474

Query: 623  EFLHSVRETQLFVVPEKQEADELLESELSRAFGGVERLDMFFPFDPCLLRKSDSFIRPNF 802
            EFL   +  +LF V E     +LLESELSRAFGG+ERLDMFFPFDPCLL+K D FIRPNF
Sbjct: 475  EFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNF 534

Query: 803  VYWSMVKSTPDDDEEFSSDYDIAEVGADEGIDIVGGGRSF*AHPFDDEFGCSFDKMSVTP 982
            VYWSM+++T DD E+ S +    +  A              +HP  D+F  S +KMS+TP
Sbjct: 535  VYWSMIRTTYDDGEDSSDEEPAEDYEA--------------SHP--DDFDHSMNKMSITP 578

Query: 983  KEYLLHKCASRNFHMQMPSKIRPSTSPESL 1072
            K  L ++       +QMPS+IRPSTSPESL
Sbjct: 579  KNSLYYRFGD-ELKVQMPSRIRPSTSPESL 607


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
            gi|223536316|gb|EEF37967.1| transcription initiation
            factor ia, putative [Ricinus communis]
          Length = 640

 Score =  327 bits (839), Expect = 3e-87
 Identities = 180/337 (53%), Positives = 217/337 (64%), Gaps = 9/337 (2%)
 Frame = +2

Query: 89   FEHLKLCYKSGRLTQVFKILLRSFQTTVLTAYKSKFTQFVVFYACSLDPVKCGKKFATVL 268
            FEHL+LC  + RL  VF+ LL SF  T+L  YKSKF QFV+FYAC+LDP  CG +FA  L
Sbjct: 311  FEHLELCANNKRLNDVFETLLDSFMLTILNTYKSKFAQFVMFYACALDPENCGVEFAERL 370

Query: 269  LNIFIYDIYPLGRMIAVAYLASYLSRAVFMSASFVATMLECLAKWCSDYCKNQDRALNPE 448
             + F Y   PL RM AVAYLASYL+RA F+  +FVA+ L+ L  WCS+YC+NQD  +NP+
Sbjct: 371  RDRFTYGENPLTRMSAVAYLASYLARAKFLPIAFVASTLKRLVDWCSEYCRNQDGDMNPK 430

Query: 449  LHKVFYAGCQAIMYLLCFRMRSMVXXXXXXXXXXXXXXXXXXMHPLSALKVCLPSIVKEF 628
             H+VFY+GCQAI+Y+LCFRM SM+                   H L  LKVCLPSIV+EF
Sbjct: 431  AHRVFYSGCQAILYVLCFRMSSMMDIPWLKSQLLHMPLEQIMKHKLGPLKVCLPSIVEEF 490

Query: 629  LHSVRETQLFVVPEKQEADELLESELSRAFGGVERLDMFFPFDPCLLRKSD-SFIRPNFV 805
            L   +   LF   +    +++LESE S+ FGG+ERLDMFFPFDPCLLR  D SFIRPNFV
Sbjct: 491  LKQAKAAHLFTTSQTSSFEDVLESEFSKDFGGLERLDMFFPFDPCLLRTCDRSFIRPNFV 550

Query: 806  YWSMVKSTPDDDEEFSSDYDIAEVGADEGIDIVGG-------GRSF*AHPFD-DEFGCSF 961
            YW  V++T   DEE SSD DIAE    +  DI GG         S      D DEF  + 
Sbjct: 551  YWKDVRTTYGSDEEDSSDEDIAE----DFTDINGGSYMEEGMATSLDGQHLDLDEFDYAM 606

Query: 962  DKMSVTPKEYLLHKCASRNFHMQMPSKIRPSTSPESL 1072
            +KMS+TPK     +   R   MQMPSKIRPSTSPESL
Sbjct: 607  NKMSITPKNRFGIRFGER---MQMPSKIRPSTSPESL 640


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 627

 Score =  321 bits (822), Expect = 3e-85
 Identities = 170/335 (50%), Positives = 222/335 (66%), Gaps = 7/335 (2%)
 Frame = +2

Query: 89   FEHLKLCYKSGRLTQVFKILLRSFQTTVLTAYKSKFTQFVVFYACSLDPVKCGKKFATVL 268
            F HL+ C  SGRLT+VF  LL SFQ TVL AYKSKFTQ+V+FYAC+LDP  CG KFA VL
Sbjct: 295  FLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVL 354

Query: 269  LNIFIYDIYP-LGRMIAVAYLASYLSRAVFMSASFVATMLECLAKWCSDYCKNQDRALNP 445
             ++F  D+ P + RM A AYLASYL+RA F+SA+ V  +++ L  WC  YCK +D  +NP
Sbjct: 355  ADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFDMNP 414

Query: 446  ELHKVFYAGCQAIMYLLCFRMRSMVXXXXXXXXXXXXXXXXXXMHPLSALKVCLPSIVKE 625
              H+VFY+GCQAIMY+LCFRMRS++                   H LS LKVCLP++V E
Sbjct: 415  RAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVE 474

Query: 626  FLHSVRETQLFVVPEKQEADELLESELSRAFGGVERLDMFFPFDPCLLRKSDSFIRPNFV 805
            FL   +  QLF+  E    D++LES+LS+AFGG++RLDMFFPFDPCLL+KS+S+IRP+FV
Sbjct: 475  FLRQAKAAQLFMASESFVFDDMLESDLSKAFGGIDRLDMFFPFDPCLLKKSESYIRPHFV 534

Query: 806  YWSMVKSTPDDDEEFSSDYDIAEVGADEGI-----DIVGGGRSF*AHPFDDEFGCSFDKM 970
             WS V++T DDD+        +EV  D+ I     D++          FD  F    +KM
Sbjct: 535  RWSKVRTTYDDDDNDELSDSGSEVSDDDFIDRNTKDMIDDDMMVSVEGFD--FNPDLNKM 592

Query: 971  SVTPKEYLLHKCASR-NFHMQMPSKIRPSTSPESL 1072
            S+TP++   H   ++ N   +MP++IRPSTSPESL
Sbjct: 593  SITPRKSFKHGFETQLNQCKRMPARIRPSTSPESL 627


>ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|222856647|gb|EEE94194.1|
            predicted protein [Populus trichocarpa]
          Length = 635

 Score =  316 bits (810), Expect = 6e-84
 Identities = 172/335 (51%), Positives = 216/335 (64%), Gaps = 8/335 (2%)
 Frame = +2

Query: 92   EHLKLCYKSGRLTQVFKILLRSFQTTVLTAYKSKFTQFVVFYACSLDPVKCGKKFATVLL 271
            EHL+ C    RL++VF+ LL SF  T+L  YKSKF+QF +FYAC+LDP  CG KFA  L+
Sbjct: 308  EHLEACADKKRLSEVFETLLSSFMATILNTYKSKFSQFTIFYACALDPENCGVKFAQTLV 367

Query: 272  NIFIYDIYP-LGRMIAVAYLASYLSRAVFMSASFVATMLECLAKWCSDYCKNQDRALNPE 448
            ++FI    P + RM AVAYL+SYL+R  F+SA+FV  ML+ L  WC  YC+ QD  +NP+
Sbjct: 368  DLFISTCNPPVTRMSAVAYLSSYLARGKFLSAAFVMNMLKRLVDWCLRYCEEQDSDMNPK 427

Query: 449  LHKVFYAGCQAIMYLLCFRMRSMVXXXXXXXXXXXXXXXXXXMHPLSALKVCLPSIVKEF 628
             H+VFY+ CQ IMY+LCF M+S++                   H L  L+VCLPSIV EF
Sbjct: 428  AHQVFYSACQGIMYVLCFHMKSIMNVPTLKSQLLLMPIEPILKHKLGPLEVCLPSIVNEF 487

Query: 629  LHSVRETQLFVVPEKQEADELLESELSRAFGGVERLDMFFPFDPCLLRKSD-SFIRPNFV 805
            L   +   LF + +    ++LLES+LSR FGG+ERLDMFFPFDPCLL+K D  FIRPNF+
Sbjct: 488  LKQAKAAHLFTISKAFIFEDLLESDLSRDFGGLERLDMFFPFDPCLLKKCDRGFIRPNFI 547

Query: 806  YWSMVKSTPDDDEEFSSDYDIAE---VGADEGIDIVGGGRSF*AHPFDDEFGCSFDKMSV 976
            YW+ VK+T DDDEE SSD DIA+   V  +E     G  RSF      DEF    +KMS+
Sbjct: 548  YWNHVKTTYDDDEEDSSDEDIADDFGVLNEENFMEEGMARSFDQDIDLDEFDYVMNKMSI 607

Query: 977  TPKEYLLHKCASRNFHM---QMPSKIRPSTSPESL 1072
            TPK        +  FH    +MPSKIRPSTSPESL
Sbjct: 608  TPKN-------TSGFHFGGERMPSKIRPSTSPESL 635