BLASTX nr result

ID: Lithospermum22_contig00005021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00005021
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617941.1| 40S ribosomal protein [Medicago truncatula] ...   143   3e-32
gb|ACU18961.1| unknown [Glycine max]                                  141   1e-31
ref|XP_003524666.1| PREDICTED: 40S ribosomal protein S26-1-like ...   140   2e-31
ref|XP_003550031.1| PREDICTED: 40S ribosomal protein S26-1-like ...   140   2e-31
ref|NP_001237066.1| uncharacterized protein LOC100499862 [Glycin...   140   2e-31

>ref|XP_003617941.1| 40S ribosomal protein [Medicago truncatula]
           gi|355519276|gb|AET00900.1| 40S ribosomal protein
           [Medicago truncatula]
          Length = 230

 Score =  143 bits (360), Expect = 3e-32
 Identities = 71/97 (73%), Positives = 73/97 (75%)
 Frame = +3

Query: 66  PPPTSATMTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIIEQAAVRDV 245
           P   S TMTF              VKFIRCSNCGKCCPKDKAIKRFLVRNI+EQAAVRDV
Sbjct: 94  PWRASTTMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDV 153

Query: 246 QEACAMESYVLPKLYVKMQYCVSCAIHSKVVRVRSVT 356
           QEAC  + Y LPKLYVKMQYCVSCAIHS VVRVRS T
Sbjct: 154 QEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRT 190


>gb|ACU18961.1| unknown [Glycine max]
          Length = 129

 Score =  141 bits (355), Expect = 1e-31
 Identities = 69/90 (76%), Positives = 70/90 (77%)
 Frame = +3

Query: 87  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIIEQAAVRDVQEACAME 266
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNI+EQAAVRDVQEAC  E
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 267 SYVLPKLYVKMQYCVSCAIHSKVVRVRSVT 356
            Y LPKLYVKMQYCVSCAIHS VVRVRS T
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSCT 90


>ref|XP_003524666.1| PREDICTED: 40S ribosomal protein S26-1-like [Glycine max]
          Length = 129

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/90 (76%), Positives = 70/90 (77%)
 Frame = +3

Query: 87  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIIEQAAVRDVQEACAME 266
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNI+EQAAVRDVQEAC  E
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 267 SYVLPKLYVKMQYCVSCAIHSKVVRVRSVT 356
            Y LPKLYVKMQYCVSCAIHS VVRVRS T
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRT 90


>ref|XP_003550031.1| PREDICTED: 40S ribosomal protein S26-1-like [Glycine max]
          Length = 129

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/90 (76%), Positives = 70/90 (77%)
 Frame = +3

Query: 87  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIIEQAAVRDVQEACAME 266
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNI+EQAAVRDVQEAC  E
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 267 SYVLPKLYVKMQYCVSCAIHSKVVRVRSVT 356
            Y LPKLYVKMQYCVSCAIHS VVRVRS T
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRT 90


>ref|NP_001237066.1| uncharacterized protein LOC100499862 [Glycine max]
           gi|255627229|gb|ACU13959.1| unknown [Glycine max]
          Length = 130

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/90 (76%), Positives = 70/90 (77%)
 Frame = +3

Query: 87  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIIEQAAVRDVQEACAME 266
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNI+EQAAVRDVQEAC  E
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 267 SYVLPKLYVKMQYCVSCAIHSKVVRVRSVT 356
            Y LPKLYVKMQYCVSCAIHS VVRVRS T
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRT 90


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