BLASTX nr result
ID: Lithospermum22_contig00005020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00005020
(2049 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 124 5e-40
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 124 5e-40
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 117 6e-40
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 95 1e-35
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 95 1e-35
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 124 bits (312), Expect(2) = 5e-40
Identities = 91/309 (29%), Positives = 142/309 (45%), Gaps = 12/309 (3%)
Frame = +2
Query: 620 SSEWLLSMRSCSVHIPAPTESDHWYLDVSVLDKLSQGPKPFKYMPFWSQYSDSLRIINEE 799
+ EW S P +SDH + + ++ K FKY F S + L ++
Sbjct: 251 NGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTA 310
Query: 800 IE-----GNDMDMLHIRLKNDRGRLKALNNEEFSNIDTRVIE---KGHELECECSN*MGI 955
E G+ M L LK + + LN FSNI R + + +++ E
Sbjct: 311 WEENTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRTAQSLTRLEDIQVELLTSPSD 370
Query: 956 KICSEARCSDK**I*NVLQSRKAVCQCKSRQTWDKDGDANTNFFHKSLKLHHMQNRISTM 1135
+ + K I + ++ + KSR W +GDANT FFH+++ H N I +
Sbjct: 371 TLFRREHVARKQWI-FFAAALESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFL 429
Query: 1136 HNKDGVIVKDFDQVKSIVIDFYKELFATPQEDTSIAATLNKFISDNIEDSDRSFLDQPFT 1315
DG V++ DQ+K ++I +Y L P E+ + + + I + SFL T
Sbjct: 430 RGDDGFRVENVDQIKGMLIAYYSHLLGIPSENVTPFSV--EKIKGLLPFRCDSFLASQLT 487
Query: 1316 A----EEIEGAMLGMKLGETPGPDGFPLEFYKATWSTVREFVVEAVKTFFATCSMPRYFN 1483
EEI + M + PGPDGFP+EF+ W+ V+ VV A++ FF + ++PR FN
Sbjct: 488 TIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFN 547
Query: 1484 STIIALIPK 1510
+T I LIPK
Sbjct: 548 ATAITLIPK 556
Score = 68.6 bits (166), Expect(2) = 5e-40
Identities = 38/145 (26%), Positives = 72/145 (49%)
Frame = +1
Query: 1534 ISCCNTIYKCVTTILANRLKTTLSKVIGTEQTAYVPGRCISGGILLMQDLSVWL**ELRC 1713
++CC TIYK +T I++ RLK + + + Q ++ GR + +LL +L +
Sbjct: 569 VACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGET 628
Query: 1714 A*MCLDS*YNEGL*HCVGVFLGKQ*SSLDIHVDLLSGLKPV*ALLGFQLQSMGSKDGFFK 1893
CL ++ + FL +LD+ + + + + + + G GFF+
Sbjct: 629 TRGCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQ 688
Query: 1894 SSKGLRHGDPLSPYLFIIIMECFSR 1968
KG+R GDP+S +LF+++M+ S+
Sbjct: 689 GKKGIRQGDPMSSHLFVLVMDVLSK 713
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 124 bits (312), Expect(2) = 5e-40
Identities = 90/309 (29%), Positives = 142/309 (45%), Gaps = 12/309 (3%)
Frame = +2
Query: 620 SSEWLLSMRSCSVHIPAPTESDHWYLDVSVLDKLSQGPKPFKYMPFWSQYSDSLRIINEE 799
+ EW S P +SDH + + ++ K FKY F S + L ++
Sbjct: 208 NGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTA 267
Query: 800 IEGNDMDMLHI-----RLKNDRGRLKALNNEEFSNIDTRVIE---KGHELECECSN*MGI 955
E N + H+ LK + + LN FSNI R + + +++ E
Sbjct: 268 WEANTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRTAQSLTRLEDIQVELLTSPSD 327
Query: 956 KICSEARCSDK**I*NVLQSRKAVCQCKSRQTWDKDGDANTNFFHKSLKLHHMQNRISTM 1135
+ + K I + ++ + KSR W +GDANT FFH+++ H N I +
Sbjct: 328 TLFRREHVARKQWI-FFAAALESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFL 386
Query: 1136 HNKDGVIVKDFDQVKSIVIDFYKELFATPQEDTSIAATLNKFISDNIEDSDRSFLDQPFT 1315
DG V++ DQ+K ++I +Y L P E+ + + + I + SFL T
Sbjct: 387 RGDDGFRVENVDQIKGMLIAYYSHLLGIPSENVTPFSV--EKIKGLLPFRCDSFLASQLT 444
Query: 1316 A----EEIEGAMLGMKLGETPGPDGFPLEFYKATWSTVREFVVEAVKTFFATCSMPRYFN 1483
EEI + M + PGPDGFP+EF+ W+ V+ VV A++ FF + ++PR FN
Sbjct: 445 TIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFN 504
Query: 1484 STIIALIPK 1510
+T I LIPK
Sbjct: 505 ATAITLIPK 513
Score = 68.6 bits (166), Expect(2) = 5e-40
Identities = 38/145 (26%), Positives = 72/145 (49%)
Frame = +1
Query: 1534 ISCCNTIYKCVTTILANRLKTTLSKVIGTEQTAYVPGRCISGGILLMQDLSVWL**ELRC 1713
++CC TIYK +T I++ RLK + + + Q ++ GR + +LL +L +
Sbjct: 526 VACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGET 585
Query: 1714 A*MCLDS*YNEGL*HCVGVFLGKQ*SSLDIHVDLLSGLKPV*ALLGFQLQSMGSKDGFFK 1893
CL ++ + FL +LD+ + + + + + + G GFF+
Sbjct: 586 TRGCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQ 645
Query: 1894 SSKGLRHGDPLSPYLFIIIMECFSR 1968
KG+R GDP+S +LF+++M+ S+
Sbjct: 646 GKKGIRQGDPMSSHLFVLVMDVLSK 670
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 117 bits (293), Expect(2) = 6e-40
Identities = 83/330 (25%), Positives = 156/330 (47%), Gaps = 16/330 (4%)
Frame = +2
Query: 620 SSEWLLSMRSCSVHIPAPTESDHWYLDVSVLDKLSQGPKPFKYMPFWS---QYSDSLRII 790
+ WL++ A SDH V++ ++ KPFK F ++ + +R+
Sbjct: 207 NDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVT 266
Query: 791 NEEI--EGNDMDMLHIRLKNDRGRLKALNNEEFSNIDTRVIEKGHELECECSN*M----- 949
+ + +G+ M L + K +G ++ N E +S ++ RV++ L+ C N +
Sbjct: 267 WDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAAQNLKT-CQNNLLAAPS 325
Query: 950 ----GIKICSEARCSDK**I*NVLQSRKAVCQCKSRQTWDKDGDANTNFFHKSLKLHHMQ 1117
G++ + ++ L + +CQ KSR W K GD+NT FFH+ +
Sbjct: 326 SYLAGLEKEAHRSWAEL-----ALAEERFLCQ-KSRVLWLKCGDSNTTFFHRMMTARRAI 379
Query: 1118 NRISTMHNKDGVIVKDFDQVKSIVIDFYKELFATPQEDTSIA--ATLNKFISDNIEDSDR 1291
N I + ++ G +++ D++++ +DF+KELF + S + +N +++ R
Sbjct: 380 NEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEGISQINSLTRFKCDENTR 439
Query: 1292 SFLDQPFTAEEIEGAMLGMKLGETPGPDGFPLEFYKATWSTVREFVVEAVKTFFATCSMP 1471
L+ + +I+ + ++PGPDG+ EF+K TWS V ++ AV+ FF + +
Sbjct: 440 QLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLL 499
Query: 1472 RYFNSTIIALIPKKQEPVHITFLAAIPYIN 1561
+NST + ++PKK IT I N
Sbjct: 500 GQWNSTAVTMVPKKPNADRITEFRPISCCN 529
Score = 75.5 bits (184), Expect(2) = 6e-40
Identities = 50/152 (32%), Positives = 76/152 (50%)
Frame = +1
Query: 1534 ISCCNTIYKCVTTILANRLKTTLSKVIGTEQTAYVPGRCISGGILLMQDLSVWL**ELRC 1713
ISCCN IYK ++ +LA RL+ L I Q+A+V GR ++ +LL +L
Sbjct: 525 ISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANIS 584
Query: 1714 A*MCLDS*YNEGL*HCVGVFLGKQ*SSLDIHVDLLSGLKPV*ALLGFQLQSMGSKDGFFK 1893
+ L + F+ + + + ++ +K F + GS G+FK
Sbjct: 585 SRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFK 644
Query: 1894 SSKGLRHGDPLSPYLFIIIMECFSRMVKFQIS 1989
SKGLR GDPLSP LF+I ME SR+++ + S
Sbjct: 645 GSKGLRQGDPLSPSLFVIAMEILSRLLENKFS 676
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 94.7 bits (234), Expect(2) = 1e-35
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 19/333 (5%)
Frame = +2
Query: 620 SSEWLLSMRSCSVHIPAPTESDHWYLDVSVLDKLSQGPKPFKYMPFWSQYSDSLRIINEE 799
+ W S + P SDH +V + + + +PF++ ++ D L++I E
Sbjct: 206 NDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIREN 265
Query: 800 -----IEGNDMDMLHIRLKNDRGRLKALNNEEFSNIDTRVIEKG----HELECECSN*MG 952
+ G+ M + +LK+ + + + E +S+I+ RV E H +N
Sbjct: 266 WYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITLTNPSV 325
Query: 953 IKICSEARCSDK**I*NVLQSRKAVCQCKSRQTWDKDGDANTNFFHKSLKLHHMQNRIST 1132
+ E + K I + ++ ++ KS +W +GD NT +FHK + N I+
Sbjct: 326 VHATLELEATRKWQI--LAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINF 383
Query: 1133 MHNKDGVIVKDFDQVKSIV----IDFYKELFATPQEDTSIAAT-LNKFIS-----DNIED 1282
+ + G ++ +K + +F++ L + + S+A + +N +S D I D
Sbjct: 384 LIDDFGERIETQQGIKEGIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQIND 443
Query: 1283 SDRSFLDQPFTAEEIEGAMLGMKLGETPGPDGFPLEFYKATWSTVREFVVEAVKTFFATC 1462
+RSF D +I+ A + + GPDG+ EF+K W V V EAV+ FF +
Sbjct: 444 LERSFSDL-----DIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSG 498
Query: 1463 SMPRYFNSTIIALIPKKQEPVHITFLAAIPYIN 1561
+ + +N+T + LIPK +T I +N
Sbjct: 499 QLLKQWNATTLVLIPKITNSSKMTDFRPISCLN 531
Score = 83.6 bits (205), Expect(2) = 1e-35
Identities = 51/148 (34%), Positives = 79/148 (53%)
Frame = +1
Query: 1534 ISCCNTIYKCVTTILANRLKTTLSKVIGTEQTAYVPGRCISGGILLMQDLSVWL**ELRC 1713
ISC NT+YK + +L +RLK L++VI Q+A++PGR +S +LL ++ +
Sbjct: 527 ISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNIS 586
Query: 1714 A*MCLDS*YNEGL*HCVGVFLGKQ*SSLDIHVDLLSGLKPV*ALLGFQLQSMGSKDGFFK 1893
+ L + F+ +L + + + + F + GS GFFK
Sbjct: 587 SRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFK 646
Query: 1894 SSKGLRHGDPLSPYLFIIIMECFSRMVK 1977
S+KGLR GDPLSPYLF++ ME FS ++K
Sbjct: 647 SNKGLRQGDPLSPYLFVLAMEVFSSLLK 674
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 94.7 bits (234), Expect(2) = 1e-35
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 19/333 (5%)
Frame = +2
Query: 620 SSEWLLSMRSCSVHIPAPTESDHWYLDVSVLDKLSQGPKPFKYMPFWSQYSDSLRIINEE 799
+ W S + P SDH +V + + + +PF++ ++ D L++I E
Sbjct: 206 NDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIREN 265
Query: 800 -----IEGNDMDMLHIRLKNDRGRLKALNNEEFSNIDTRVIEKG----HELECECSN*MG 952
+ G+ M + +LK+ + + + E +S+I+ RV E H +N
Sbjct: 266 WYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITLTNPSV 325
Query: 953 IKICSEARCSDK**I*NVLQSRKAVCQCKSRQTWDKDGDANTNFFHKSLKLHHMQNRIST 1132
+ E + K I + ++ ++ KS +W +GD NT +FHK + N I+
Sbjct: 326 VHATLELEATRKWQI--LAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINF 383
Query: 1133 MHNKDGVIVKDFDQVKSIV----IDFYKELFATPQEDTSIAAT-LNKFIS-----DNIED 1282
+ + G ++ +K + +F++ L + + S+A + +N +S D I D
Sbjct: 384 LIDDFGERIETQQGIKEGIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQIND 443
Query: 1283 SDRSFLDQPFTAEEIEGAMLGMKLGETPGPDGFPLEFYKATWSTVREFVVEAVKTFFATC 1462
+RSF D +I+ A + + GPDG+ EF+K W V V EAV+ FF +
Sbjct: 444 LERSFSDL-----DIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSG 498
Query: 1463 SMPRYFNSTIIALIPKKQEPVHITFLAAIPYIN 1561
+ + +N+T + LIPK +T I +N
Sbjct: 499 QLLKQWNATTLVLIPKITNSSKMTDFRPISCLN 531
Score = 83.6 bits (205), Expect(2) = 1e-35
Identities = 51/148 (34%), Positives = 79/148 (53%)
Frame = +1
Query: 1534 ISCCNTIYKCVTTILANRLKTTLSKVIGTEQTAYVPGRCISGGILLMQDLSVWL**ELRC 1713
ISC NT+YK + +L +RLK L++VI Q+A++PGR +S +LL ++ +
Sbjct: 527 ISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNIS 586
Query: 1714 A*MCLDS*YNEGL*HCVGVFLGKQ*SSLDIHVDLLSGLKPV*ALLGFQLQSMGSKDGFFK 1893
+ L + F+ +L + + + + F + GS GFFK
Sbjct: 587 SRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFK 646
Query: 1894 SSKGLRHGDPLSPYLFIIIMECFSRMVK 1977
S+KGLR GDPLSPYLF++ ME FS ++K
Sbjct: 647 SNKGLRQGDPLSPYLFVLAMEVFSSLLK 674