BLASTX nr result
ID: Lithospermum22_contig00004994
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00004994
(1731 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi... 717 0.0
ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containi... 494 e-137
ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group] g... 491 e-136
dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare] 483 e-134
ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea ma... 483 e-134
>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 717 bits (1850), Expect = 0.0
Identities = 344/562 (61%), Positives = 442/562 (78%), Gaps = 9/562 (1%)
Frame = +3
Query: 51 KKNYFDFKNH---------LNSCSSLSELKCIHAIIIITGSSQNLFVVTKLVSLACSLSH 203
K+ FDF+ + LN CSSL +L IHA+++ G QNL + TKL+ AC L+
Sbjct: 17 KRVLFDFRTNYHSRSFNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAP 76
Query: 204 TMYYARKVFDELPHCRKDVFLWNNVIRGYANLGPCQESIVLYREMHREGVFPDNYTYPFV 383
TM YARK+FD++P ++DVFLWN +IRGYA+ GPC+E++ LY MH G+FPDNYT+PFV
Sbjct: 77 TMDYARKMFDQMP--KRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFV 134
Query: 384 VRSCAVIAAAVEGREVHCSVIKRALDCDVFVQSALITMYAQCGVMLDARLVFCEMGVRNI 563
VRSCAV++A EG+EVHC+++K D DVFVQS+L+ MY+Q G L LVF EM VRNI
Sbjct: 135 VRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNI 194
Query: 564 VSWTAMISGYVQNGMLEEGLDTLRELVVAGDNKPNAITLASALPACSLSKYFYLGMVIHC 743
VSWTA+I+GYVQN +EGL RE+V +G +PNA+TL S LPAC+ ++ LG +IH
Sbjct: 195 VSWTAVIAGYVQNRYFKEGLGVFREMVGSG-TQPNAVTLVSVLPACAGLEFLNLGKLIHG 253
Query: 744 YGVKLGLEKDVTLVNGLIAFYGKCGNVKKARSLFHNMEVRSLVSWNAMIAAYEQNDAGSS 923
YG+KLG++ DV+L N LIA YGKCGNV+ ARSLF M V++LVSWNAMIAAYEQN+AG++
Sbjct: 254 YGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGAN 313
Query: 924 AIKLFRRMLKERSEFDHITMVSVISACTSLGALGTGEWAYELIKRRELENNVAVINALVD 1103
A+KLFRRM E+ +FD+ITMVSVISAC SLGAL TG W +EL+KR+ LE NV++ NAL+D
Sbjct: 314 AVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALID 373
Query: 1104 MYAKCGNLDFAKEVFSKLPYRTVVSWTAIIGAFASHGRGEEALNLFQQMKGEGIRPNSLT 1283
MYAKCGN+D A+EVF +LP R+VVSWT++IGA ASHG GE+AL LF +MK EG++PNS T
Sbjct: 374 MYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFT 433
Query: 1284 FISVLTACRHSGLVEEGRQHYESMIEDYSLTPCLEHCACMVDLLGRAGKLIEAYEFIGNM 1463
F +V TACRHSGLVEEGR+H+ESM+ DYS+ P +EHCACMVDLLGRAG L+EAYEFI M
Sbjct: 434 FAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKM 493
Query: 1464 PIQPNAGIWEALLGACRIHSNVELAELIAKQLIRQNCDKISLYVLMKNIYAEAGRWENAT 1643
P++P+ +W ALLG+CRIHSN+ELAEL+A++L + ++ YVLM NIYAEAGRWE+A
Sbjct: 494 PVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAA 553
Query: 1644 RVRMMLEEKELKRTAGRSFVEM 1709
R+R ++EE+ELK+ G S VE+
Sbjct: 554 RLRKLMEERELKKIPGHSLVEV 575
>ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
[Brachypodium distachyon]
Length = 710
Score = 494 bits (1272), Expect = e-137
Identities = 260/546 (47%), Positives = 352/546 (64%), Gaps = 6/546 (1%)
Frame = +3
Query: 84 NSCSSLSELKCIHAIIIITGSSQNLFVVTKLVSLA--CSLSHTMYYARKVFDELPHCRKD 257
+S SSL L IHA ++ G + N T L+++A CSL+ YAR+VFD PH +D
Sbjct: 160 SSSSSLRALLPIHARAVVLGIATNPAFATSLLAVAAPCSLA----YARRVFDAAPH--RD 213
Query: 258 VFLWNNVIRGYAN--LGPCQESIVLYREMHREGVFPDNYTYPFVVRSCAVIAAAVEGREV 431
V++WN ++R +A+ P ++ LY+ M GV PD+YTYP V+ +CA A GR
Sbjct: 214 VYMWNTLLRVHAHSHAEPQSSALSLYKRMRAAGVAPDHYTYPIVLPACAAARAPRLGRAA 273
Query: 432 HCSVIKRALDCDVFVQSALITMYAQCGVMLDARLVFCEMG--VRNIVSWTAMISGYVQNG 605
H ++ AL D FV SALI MY Q G + DA VF R +VSWTAM++GYVQN
Sbjct: 274 HGDAVRFALAGDCFVHSALIAMYCQDGDVADAEQVFLGTAGASRTVVSWTAMVAGYVQNC 333
Query: 606 MLEEGLDTLRELVVAGDNKPNAITLASALPACSLSKYFYLGMVIHCYGVKLGLEKDVTLV 785
E + +V G PN ITL S LP ++ G ++H + +KL + +V L+
Sbjct: 334 FFGEAIAVFGAVVAEGV-LPNEITLISFLPCLQGQEWLTAGEMVHGFALKLRFDANVPLL 392
Query: 786 NGLIAFYGKCGNVKKARSLFHNMEVRSLVSWNAMIAAYEQNDAGSSAIKLFRRMLKERSE 965
N L+A YGKCG+V A+ LF M R+LVSWN M+A YEQN G AIK FRRML E+
Sbjct: 393 NALVAMYGKCGSVLSAKGLFDGMATRTLVSWNTMVAMYEQNSDGVQAIKFFRRMLTEKVG 452
Query: 966 FDHITMVSVISACTSLGALGTGEWAYELIKRRELENNVAVINALVDMYAKCGNLDFAKEV 1145
FD +T+VSV+SAC GAL TG+W +EL + L+N+ + N LVDMYAKCG + +A+EV
Sbjct: 453 FDCVTLVSVLSACARSGALETGKWVHELARSHGLDNDARIGNVLVDMYAKCGEIAYAREV 512
Query: 1146 FSKLPYRTVVSWTAIIGAFASHGRGEEALNLFQQMKGEGIRPNSLTFISVLTACRHSGLV 1325
F L VVSW+A+I A+A+HG +EAL LF MKGEG++PNS T +VL AC HSGLV
Sbjct: 513 FDSLREPGVVSWSAMISAYANHGEHQEALKLFSLMKGEGVKPNSFTVTAVLVACGHSGLV 572
Query: 1326 EEGRQHYESMIEDYSLTPCLEHCACMVDLLGRAGKLIEAYEFIGNMPIQPNAGIWEALLG 1505
+EG +H+ S+ +Y ++P LEH ACM+D+LGRAG+L+EAYE I M +QP+ +W A LG
Sbjct: 573 DEGLKHFNSIAMEYQMSPTLEHYACMLDMLGRAGRLVEAYEIIRGMSVQPDKCVWGAFLG 632
Query: 1506 ACRIHSNVELAELIAKQLIRQNCDKISLYVLMKNIYAEAGRWENATRVRMMLEEKELKRT 1685
CR+H N+ELAE +A L + + ++ YVLM N+Y EAG E+A R+R ++E ELK+T
Sbjct: 633 GCRLHCNLELAEFVANDLFQSGSNDVTFYVLMANMYFEAGMLEDAERMRRAMKEMELKKT 692
Query: 1686 AGRSFV 1703
AG S V
Sbjct: 693 AGHSSV 698
>ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group] gi|62734753|gb|AAX96862.1|
Similar to selenium-binding protein [Oryza sativa
Japonica Group] gi|77549625|gb|ABA92422.1|
pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa
Japonica Group] gi|125597201|gb|EAZ36981.1| hypothetical
protein OsJ_21321 [Oryza sativa Japonica Group]
Length = 582
Score = 491 bits (1264), Expect = e-136
Identities = 258/544 (47%), Positives = 352/544 (64%), Gaps = 4/544 (0%)
Frame = +3
Query: 84 NSCSSLSELKCIHAIIIITGSSQNLFVVTKLVSLACSLSHTMYYARKVFDELPHCRKDVF 263
++ +SL L IHA ++ G S N T L++ + YAR+VFD P +D +
Sbjct: 33 SAAASLRALLPIHARAVVLGISANPAFATSLITAVAPAC--LAYARRVFDAAPS--RDAY 88
Query: 264 LWNNVIRGYANL-GPCQESIVLYREMHREGVFPDNYTYPFVVRSCAVIAAAVEGREVHCS 440
+WN ++R +A+ ++++ LY M GV PD+YTYP V+ +CA A GR H
Sbjct: 89 MWNTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGD 148
Query: 441 VIKRALDCDVFVQSALITMYAQCGVMLDARLVFCEMG-VRNIVSWTAMISGYVQNGMLEE 617
++ AL D FV SALI+MY+Q G + DA VF E R +VSWTAM++GY QN E
Sbjct: 149 AVRFALARDGFVSSALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGE 208
Query: 618 GLDTLRELVVAGDNKPNAITLASALPACSLSKYFYLGMVIHCYGVKLGLEKDVTLVNGLI 797
+ ++V AG PN ITL S LP ++ +G ++H + VKLG + +V +VN LI
Sbjct: 209 AVTLFSDMVAAGV-LPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALI 267
Query: 798 AFYGKCGNVKKARSLFHNMEVRSLVSWNAMIAAYEQNDAGSSAIKLFRRMLKERSEFDHI 977
YG+CG+ AR LF+ M R+LVSWN M+A YEQ+ G AIK FRRML E+ FD +
Sbjct: 268 TMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCV 327
Query: 978 TMVSVISACTSLGALGTGEWAYELIKRRELENNVAVINALVDMYAKCGNLDFAKEVFSKL 1157
T+VSV+SAC GALGTG+W +EL + L+ + + N LVDMYAKCG + +AKEVF
Sbjct: 328 TLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSH 387
Query: 1158 PYR--TVVSWTAIIGAFASHGRGEEALNLFQQMKGEGIRPNSLTFISVLTACRHSGLVEE 1331
R +VVSW+A+I A+A+HG EEAL LF M+ EG+RPNS TF +VL AC HSGLV+E
Sbjct: 388 GLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDE 447
Query: 1332 GRQHYESMIEDYSLTPCLEHCACMVDLLGRAGKLIEAYEFIGNMPIQPNAGIWEALLGAC 1511
G +H+ S+ DY ++P LEH ACMVD+LGRAG+L+EAY I MPI+P+ +W A LG C
Sbjct: 448 GLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCVWGAFLGGC 507
Query: 1512 RIHSNVELAELIAKQLIRQNCDKISLYVLMKNIYAEAGRWENATRVRMMLEEKELKRTAG 1691
R+H VELAE +AK+L + ++ YVLM N+Y EAG E+A R+R +++E ELK+TAG
Sbjct: 508 RLHGMVELAEYVAKELFDSGSNDVTFYVLMANMYFEAGMLEDAERIRGVMKEMELKKTAG 567
Query: 1692 RSFV 1703
S V
Sbjct: 568 HSLV 571
>dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 584
Score = 483 bits (1243), Expect = e-134
Identities = 258/555 (46%), Positives = 350/555 (63%), Gaps = 10/555 (1%)
Frame = +3
Query: 84 NSCSSLSELKCIHAIIIITGSSQNLFVVTKLVSLA--CSLSHTMYYARKVFDELPHCRKD 257
+S SSL L IHA ++ G + N T+L++ A CSL+ YAR+VFD P R+D
Sbjct: 31 SSSSSLRALLPIHARAVLLGVAANPAFATRLLAAAAPCSLA----YARRVFDAAP--RRD 84
Query: 258 VFLWNNVIRGYANL-----GPCQESIVLYREMHREGVFPDNYTYPFVVRSCAVIAAAVEG 422
++WN ++R +A+ ++ LY+ M GV PD YTYP V+ +CA A G
Sbjct: 85 AYMWNTLLRAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLG 144
Query: 423 REVHCSVIKRALDCDVFVQSALITMYAQCGVMLDARLVF---CEMGVRNIVSWTAMISGY 593
R H ++ AL D FV SALI MY Q G + DA VF +G R +VSWTAM++GY
Sbjct: 145 RAAHGDAVRFALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGY 204
Query: 594 VQNGMLEEGLDTLRELVVAGDNKPNAITLASALPACSLSKYFYLGMVIHCYGVKLGLEKD 773
QN + + + +V G PN ITL S LP + G ++H + VKLG + +
Sbjct: 205 AQNCLFGQAVTVFGAMVAQG-MLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDAN 263
Query: 774 VTLVNGLIAFYGKCGNVKKARSLFHNMEVRSLVSWNAMIAAYEQNDAGSSAIKLFRRMLK 953
+ LVN LIA YGKCG++ A+ LF M ++VSWN M+A YEQN G AIK F RML
Sbjct: 264 LPLVNALIAMYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLS 323
Query: 954 ERSEFDHITMVSVISACTSLGALGTGEWAYELIKRRELENNVAVINALVDMYAKCGNLDF 1133
E+ FD +T+VSV+SACT GAL TG+W +EL + R L+ + + N LVDMYAKCG + +
Sbjct: 324 EKVGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAY 383
Query: 1134 AKEVFSKLPYRTVVSWTAIIGAFASHGRGEEALNLFQQMKGEGIRPNSLTFISVLTACRH 1313
A++ F L VVSW+A+I A+A+HG EEALNLF MK +G++PNS T +VL AC H
Sbjct: 384 ARQAFDGLREPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGH 443
Query: 1314 SGLVEEGRQHYESMIEDYSLTPCLEHCACMVDLLGRAGKLIEAYEFIGNMPIQPNAGIWE 1493
SGLV+EG + S++ DY ++P LE+ ACMVD+LGRAG+L+EAYE I M +QP+ IW
Sbjct: 444 SGLVDEGLAIFNSIVRDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWG 503
Query: 1494 ALLGACRIHSNVELAELIAKQLIRQNCDKISLYVLMKNIYAEAGRWENATRVRMMLEEKE 1673
A LG CR+H N+ELAE +AK L + + ++ YVLM N+Y EAG E+A R R ++E E
Sbjct: 504 AFLGGCRLHGNLELAEFVAKDLFQSGSNDVTFYVLMANMYFEAGMLEDAERTRRAMKEME 563
Query: 1674 LKRTAGRSFVEMVKG 1718
LK+TAG S V +G
Sbjct: 564 LKKTAGHSLVCTSRG 578
>ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein
ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 483 bits (1242), Expect = e-134
Identities = 253/540 (46%), Positives = 346/540 (64%), Gaps = 4/540 (0%)
Frame = +3
Query: 96 SLSELKCIHAIIIITGSSQNLFVVTKLVSLACSLSHTMYYARKVFDELPHCRKDVFLWNN 275
SL L IHA I+ G S N T L++ S + YAR+VFD P +D ++WN
Sbjct: 33 SLRALLPIHARAIVLGVSANPAFATSLLAGVAPAS--LAYARRVFDATPV--RDAYMWNT 88
Query: 276 VIRGYAN--LGPCQESIVLYREMHREGVFPDNYTYPFVVRSCAVIAAAVEGREVHCSVIK 449
++R +++ L +++ LY+ M GV PD+YTYP V+ +CA GR VH V++
Sbjct: 89 LLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVR 148
Query: 450 RALDCDVFVQSALITMYAQCGVMLDARLVFCEM--GVRNIVSWTAMISGYVQNGMLEEGL 623
AL D FV SALITMY Q G + DA LVF E R +VSWT+M++GYVQN E +
Sbjct: 149 FALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAV 208
Query: 624 DTLRELVVAGDNKPNAITLASALPACSLSKYFYLGMVIHCYGVKLGLEKDVTLVNGLIAF 803
++ G PN ITL S LP ++ G ++H + ++LG + ++ L N LIA
Sbjct: 209 ALFGTMIAEGV-LPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIPLANALIAM 267
Query: 804 YGKCGNVKKARSLFHNMEVRSLVSWNAMIAAYEQNDAGSSAIKLFRRMLKERSEFDHITM 983
YGKCG++ A++LF M RSL SWN M+A YEQ+ AIK FRRML E+ FD +T+
Sbjct: 268 YGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFDCVTL 327
Query: 984 VSVISACTSLGALGTGEWAYELIKRRELENNVAVINALVDMYAKCGNLDFAKEVFSKLPY 1163
VSV+SAC GAL TG+W +EL + L+ + + N LVDMYAKCG + A+ VF L
Sbjct: 328 VSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRM 387
Query: 1164 RTVVSWTAIIGAFASHGRGEEALNLFQQMKGEGIRPNSLTFISVLTACRHSGLVEEGRQH 1343
R+VVSW+A+I A+A+HG EEAL LF MK EG+RPNS TF +VL AC HSGLVEEG +H
Sbjct: 388 RSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEEGLKH 447
Query: 1344 YESMIEDYSLTPCLEHCACMVDLLGRAGKLIEAYEFIGNMPIQPNAGIWEALLGACRIHS 1523
+ S++ DY ++P LEH ACMVD+LGRAG+LIEAYE I M + P+ +W A L C++H
Sbjct: 448 FNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCVWGAFLAGCKLHG 507
Query: 1524 NVELAELIAKQLIRQNCDKISLYVLMKNIYAEAGRWENATRVRMMLEEKELKRTAGRSFV 1703
N+ELAE +A+ L + + ++ YVLM N+Y EAG ++A R+R ++E EL +TAGRS +
Sbjct: 508 NLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKDAERMRWAMKEMELNKTAGRSAI 567