BLASTX nr result

ID: Lithospermum22_contig00004958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004958
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487...   116   1e-23
dbj|BAA88671.1| histone H1 [Nicotiana tabacum]                        114   4e-23
gb|AAC41651.1| histone H1 [Nicotiana tabacum]                         111   4e-22
sp|P37218.1|H1_SOLLC RecName: Full=Histone H1 gi|424100|gb|AAA50...   102   2e-19
sp|Q9M5W4.1|H1_EUPES RecName: Full=Histone H1 gi|6752901|gb|AAF2...   102   2e-19

>ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487|emb|CAA12232.1|
           histone H1 [Solanum lycopersicum]
          Length = 271

 Score =  116 bits (290), Expect = 1e-23
 Identities = 64/126 (50%), Positives = 76/126 (60%)
 Frame = +2

Query: 44  MATEEPIINTPEVKADEAIVDPPVEDKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 223
           MATEEP++    V     + +P  E+ P                               H
Sbjct: 1   MATEEPVVAIEPVNEPMVVAEPATEENPPAETDEPKKEKEIKAKKSSAPRKRNPPT---H 57

Query: 224 PSYFEMIEEAIVTLKDRTGSSQQAIQKFIEQKQKNLPTNFRKMLLFHLKKLVASDKLIKI 403
           PSYFEMI+EAIVTLKD+TGSSQ AI KFIE KQKNLP+NFRKMLL  LKKLVAS KL+K+
Sbjct: 58  PSYFEMIKEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKMLLAQLKKLVASGKLVKV 117

Query: 404 KASYKI 421
           K+SYK+
Sbjct: 118 KSSYKL 123


>dbj|BAA88671.1| histone H1 [Nicotiana tabacum]
          Length = 279

 Score =  114 bits (286), Expect = 4e-23
 Identities = 66/128 (51%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
 Frame = +2

Query: 44  MATEEPIINTPEVKADEAIVD--PPVEDKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
           MATEEP++ T E+  + A+V+  P  ED P                              
Sbjct: 1   MATEEPVVAT-EIVTEPAVVEAEPAKEDNPPAVESDEPKKEKETKAKKPAAPRKRNPPT- 58

Query: 218 XHPSYFEMIEEAIVTLKDRTGSSQQAIQKFIEQKQKNLPTNFRKMLLFHLKKLVASDKLI 397
            HPSYFEMI++AIVTLKD+TGSSQ AI KFIE KQKNLP+NFRK+LL  LKKLVAS KL+
Sbjct: 59  -HPSYFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLV 117

Query: 398 KIKASYKI 421
           K+K+SYK+
Sbjct: 118 KVKSSYKL 125


>gb|AAC41651.1| histone H1 [Nicotiana tabacum]
          Length = 282

 Score =  111 bits (278), Expect = 4e-22
 Identities = 61/126 (48%), Positives = 78/126 (61%)
 Frame = +2

Query: 44  MATEEPIINTPEVKADEAIVDPPVEDKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 223
           MATEEP++ T E+  +  +V+     + +                              H
Sbjct: 1   MATEEPLVVT-EIVTEAVVVEAEPAKEENSPAAEPDEPKKEKEIEAKKPAAPRKRNPPTH 59

Query: 224 PSYFEMIEEAIVTLKDRTGSSQQAIQKFIEQKQKNLPTNFRKMLLFHLKKLVASDKLIKI 403
           PSYFEMI++AIVTLKD+TGSSQ AI KFIE KQKNLP+NFRK+LL  LKKLVAS KL+K+
Sbjct: 60  PSYFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKV 119

Query: 404 KASYKI 421
           K+SYK+
Sbjct: 120 KSSYKL 125


>sp|P37218.1|H1_SOLLC RecName: Full=Histone H1 gi|424100|gb|AAA50578.1| histone H1
           [Solanum lycopersicum]
          Length = 287

 Score =  102 bits (255), Expect = 2e-19
 Identities = 59/126 (46%), Positives = 74/126 (58%)
 Frame = +2

Query: 44  MATEEPIINTPEVKADEAIVDPPVEDKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 223
           MATEEP+I    V+   A    P   K +                              H
Sbjct: 1   MATEEPVIVNEVVEEQAA----PETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTH 56

Query: 224 PSYFEMIEEAIVTLKDRTGSSQQAIQKFIEQKQKNLPTNFRKMLLFHLKKLVASDKLIKI 403
           P YFEMI++AIVTLK+RTGSSQ AI KFIE+KQK+LP+NF+K+LL  LKK VAS+KL+K+
Sbjct: 57  PPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKV 116

Query: 404 KASYKI 421
           K SYK+
Sbjct: 117 KNSYKL 122


>sp|Q9M5W4.1|H1_EUPES RecName: Full=Histone H1 gi|6752901|gb|AAF27930.1|AF222804_1
           histone H1 [Euphorbia esula]
          Length = 229

 Score =  102 bits (255), Expect = 2e-19
 Identities = 48/67 (71%), Positives = 58/67 (86%)
 Frame = +2

Query: 221 HPSYFEMIEEAIVTLKDRTGSSQQAIQKFIEQKQKNLPTNFRKMLLFHLKKLVASDKLIK 400
           HPS+FEMI +AI TLK+RTGSSQ AI KF+E K K LP+NFRK+LLFHLKKLVAS KL+K
Sbjct: 51  HPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVK 110

Query: 401 IKASYKI 421
           +K S+K+
Sbjct: 111 VKNSFKL 117


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