BLASTX nr result

ID: Lithospermum22_contig00004907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004907
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB29933.1| P0 ribosomal protein-like [Solanum tuberosum] gi|...   487   e-135
ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycin...   481   e-133
ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [...   480   e-133
ref|NP_187531.1| 60S acidic ribosomal protein P0-2 [Arabidopsis ...   478   e-132
ref|XP_002884720.1| 60S acidic ribosomal protein P0 [Arabidopsis...   477   e-132

>gb|ABB29933.1| P0 ribosomal protein-like [Solanum tuberosum]
            gi|82623393|gb|ABB87111.1| P0 ribosomal protein-like
            [Solanum tuberosum]
          Length = 320

 Score =  487 bits (1253), Expect = e-135
 Identities = 246/278 (88%), Positives = 263/278 (94%)
 Frame = -3

Query: 1143 MAPKQTKAEKKIAYDEKLCKLLDEYTQILVAAADNVGSKQLQGIRKGLRGDSVVLMGKNT 964
            MAPK TKAEKKIAYD K+C+LLD++TQ+LVAAADNVGS QLQ IRKGLRGDSVVLMGKNT
Sbjct: 1    MAPKATKAEKKIAYDTKMCQLLDDFTQVLVAAADNVGSNQLQSIRKGLRGDSVVLMGKNT 60

Query: 963  MMKRTVRVHSQNTGNNTILNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 784
            MMKRT+RVH++ TGN TILNLIPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRTIRVHAEKTGNETILNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 783  PIDVVVEPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 604
            P+DVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121  PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 603  LAIRPFSYGLVIESVYDNGSVFSPEVLDLTEEDLIEKFAVGVSMVMSLSLAISYPTLAAA 424
            L IRPFSYGLV+ SVYDNGSVFSPEVLDLTE+DLIEKFA+GVSMV SL+LAISYPTLAAA
Sbjct: 181  LGIRPFSYGLVVVSVYDNGSVFSPEVLDLTEDDLIEKFAMGVSMVTSLALAISYPTLAAA 240

Query: 423  PHMLINGYKNLLAVAVETEFSFPLADKVKEYLKDPSKF 310
            PHM  N YKN+LA+AVET++SFPLADKVKEYL DPSKF
Sbjct: 241  PHMFTNAYKNVLAIAVETDYSFPLADKVKEYLADPSKF 278


>ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycine max]
            gi|255641162|gb|ACU20858.1| unknown [Glycine max]
          Length = 319

 Score =  481 bits (1237), Expect = e-133
 Identities = 246/278 (88%), Positives = 259/278 (93%)
 Frame = -3

Query: 1143 MAPKQTKAEKKIAYDEKLCKLLDEYTQILVAAADNVGSKQLQGIRKGLRGDSVVLMGKNT 964
            MAPKQTKAEKKIAYD KLC L++EY QILV  +DNVGS QLQ IRKGLRGDSVVLMGKNT
Sbjct: 1    MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 963  MMKRTVRVHSQNTGNNTILNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 784
            MMKR+VR+H++ TGNN  LNLIPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 783  PIDVVVEPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 604
            PIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 603  LAIRPFSYGLVIESVYDNGSVFSPEVLDLTEEDLIEKFAVGVSMVMSLSLAISYPTLAAA 424
            L IRPFSYGLV+ SVYDNGSVFSPEVLDLTE+DLIEKFA GVSMV SLSLAISYPTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 423  PHMLINGYKNLLAVAVETEFSFPLADKVKEYLKDPSKF 310
            PHM +N YKN+LAVAVET++SFP ADKVKEYLKDPSKF
Sbjct: 241  PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKF 278


>ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  480 bits (1236), Expect = e-133
 Identities = 245/278 (88%), Positives = 260/278 (93%)
 Frame = -3

Query: 1143 MAPKQTKAEKKIAYDEKLCKLLDEYTQILVAAADNVGSKQLQGIRKGLRGDSVVLMGKNT 964
            MA K +KA+KKIAYD+KLC+LLDEY+QIL+AAADNVGS QLQ IRKGLRGDSVVLMGKNT
Sbjct: 1    MAVKPSKADKKIAYDQKLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 963  MMKRTVRVHSQNTGNNTILNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 784
            MMKR++R+H++ TGN   LNLIPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSIRLHAEKTGNTAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 783  PIDVVVEPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 604
            PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121  PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 603  LAIRPFSYGLVIESVYDNGSVFSPEVLDLTEEDLIEKFAVGVSMVMSLSLAISYPTLAAA 424
            L IRPFSYGLV+ SVYDNGSVFSPEVLDLTEEDLIEKFA GVSMV SLSLAISYPTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 423  PHMLINGYKNLLAVAVETEFSFPLADKVKEYLKDPSKF 310
            PHM IN YKN+LAVAV TE+SFP ADKVKEYLKDPSKF
Sbjct: 241  PHMFINAYKNVLAVAVATEYSFPQADKVKEYLKDPSKF 278


>ref|NP_187531.1| 60S acidic ribosomal protein P0-2 [Arabidopsis thaliana]
            gi|19884289|sp|Q42112.2|RLA02_ARATH RecName: Full=60S
            acidic ribosomal protein P0-2
            gi|6478915|gb|AAF14020.1|AC011436_4 putative 60S acidic
            ribosomal protein P0 [Arabidopsis thaliana]
            gi|13877925|gb|AAK44040.1|AF370225_1 putative 60S acidic
            ribosomal protein P0 [Arabidopsis thaliana]
            gi|16323458|gb|AAL15223.1| putative 60S acidic ribosomal
            protein P0 [Arabidopsis thaliana]
            gi|332641215|gb|AEE74736.1| 60S acidic ribosomal protein
            P0-2 [Arabidopsis thaliana]
          Length = 320

 Score =  478 bits (1230), Expect = e-132
 Identities = 240/275 (87%), Positives = 259/275 (94%)
 Frame = -3

Query: 1134 KQTKAEKKIAYDEKLCKLLDEYTQILVAAADNVGSKQLQGIRKGLRGDSVVLMGKNTMMK 955
            K TKAEKKIAYD KLC+L+DEYTQILV AADNVGS QLQ IRKGLRGDSVVLMGKNTMMK
Sbjct: 3    KATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 62

Query: 954  RTVRVHSQNTGNNTILNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 775
            R+VR+HS+NTGN  ILNL+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID
Sbjct: 63   RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 122

Query: 774  VVVEPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLAI 595
            VVV+PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKL I
Sbjct: 123  VVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGI 182

Query: 594  RPFSYGLVIESVYDNGSVFSPEVLDLTEEDLIEKFAVGVSMVMSLSLAISYPTLAAAPHM 415
            RPFSYGLV++SVYDNGSVFSPEVLDLTE+ L+EKFA G+SMV SL+LA+SYPTLAAAPHM
Sbjct: 183  RPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHM 242

Query: 414  LINGYKNLLAVAVETEFSFPLADKVKEYLKDPSKF 310
             IN YKN LA+AV TE++FP A+KVKEYLKDPSKF
Sbjct: 243  FINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKF 277


>ref|XP_002884720.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
            gi|297330560|gb|EFH60979.1| 60S acidic ribosomal protein
            P0 [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score =  477 bits (1227), Expect = e-132
 Identities = 240/275 (87%), Positives = 259/275 (94%)
 Frame = -3

Query: 1134 KQTKAEKKIAYDEKLCKLLDEYTQILVAAADNVGSKQLQGIRKGLRGDSVVLMGKNTMMK 955
            K TKAEKKIAYD KLC+L+DEYTQILV AADNVGS QLQ IRKGLRGDSVVLMGKNTMMK
Sbjct: 3    KATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 62

Query: 954  RTVRVHSQNTGNNTILNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 775
            R+VR+HS+NTGN  ILNL+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID
Sbjct: 63   RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 122

Query: 774  VVVEPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLAI 595
            VVV+PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKL I
Sbjct: 123  VVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGI 182

Query: 594  RPFSYGLVIESVYDNGSVFSPEVLDLTEEDLIEKFAVGVSMVMSLSLAISYPTLAAAPHM 415
            RPFSYGLV++SVYDNGSVFSPEVLDLTE+ L+EKFA G+SMV SL+LAISYPTLAAAPHM
Sbjct: 183  RPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAISYPTLAAAPHM 242

Query: 414  LINGYKNLLAVAVETEFSFPLADKVKEYLKDPSKF 310
             IN YKN LA+AV TE++FP A+KVKE+LKDPSKF
Sbjct: 243  FINAYKNALAIAVATEYTFPQAEKVKEFLKDPSKF 277


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