BLASTX nr result

ID: Lithospermum22_contig00004889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004889
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264817.2| PREDICTED: uncharacterized protein LOC100267...   234   3e-59
ref|XP_002530443.1| structural constituent of ribosome, putative...   233   6e-59
ref|XP_004167412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   225   2e-56
ref|XP_004152189.1| PREDICTED: uncharacterized protein LOC101212...   225   2e-56
ref|NP_563982.1| S15/NS1, RNA-binding protein [Arabidopsis thali...   224   4e-56

>ref|XP_002264817.2| PREDICTED: uncharacterized protein LOC100267570 [Vitis vinifera]
          Length = 443

 Score =  234 bits (597), Expect = 3e-59
 Identities = 128/209 (61%), Positives = 149/209 (71%), Gaps = 1/209 (0%)
 Frame = -1

Query: 1019 YNYEDLGKKLMNLRPEKKKDERNWFSLQELSERLHKLRANDVNDMKSA-PKNLFIEIRSC 843
            Y  E+LGKKL  LRPE   +  + FSL+EL+ERL KLR  +  + +S+ P   F ++R  
Sbjct: 241  YGPEELGKKLRELRPETGAE--SCFSLKELNERLMKLREMEEKETESSIPGVSFKDLRES 298

Query: 842  MAKWXXXXXXXXXXXXXXXVQRIDMLNNLGAEQDFMLSPPKEHLVEKYFHPDNMSSAEKL 663
            + +                   +D+L  LG    FML+PPKEHLVE+YFHPDNMSSAEKL
Sbjct: 299  LVR----LRMADDEKTKKSSSELDILGRLGGTPSFMLAPPKEHLVEQYFHPDNMSSAEKL 354

Query: 662  KIELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLSTALHKKDKHSLKGLQAMVQXXXXX 483
            K+ELKKVRDEFKMSESDCGSARVQVAQLTTKIKHL++ALHKKDKHS KGLQAMVQ     
Sbjct: 355  KVELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLNSALHKKDKHSRKGLQAMVQRRKKL 414

Query: 482  XXXXXRTDWDSYCLVLSKLGLRDNPDYKN 396
                 RTDWDSYCLVLSKLGLRDNP+YKN
Sbjct: 415  LKYLRRTDWDSYCLVLSKLGLRDNPNYKN 443


>ref|XP_002530443.1| structural constituent of ribosome, putative [Ricinus communis]
            gi|223529988|gb|EEF31913.1| structural constituent of
            ribosome, putative [Ricinus communis]
          Length = 461

 Score =  233 bits (594), Expect = 6e-59
 Identities = 125/208 (60%), Positives = 142/208 (68%)
 Frame = -1

Query: 1022 AYNYEDLGKKLMNLRPEKKKDERNWFSLQELSERLHKLRANDVNDMKSAPKNLFIEIRSC 843
            AY+Y +LG+KLM+LR E K+ E+ WFSL+EL+ERL KLR  +  + +S     +  IR  
Sbjct: 256  AYSYGELGEKLMSLRSEVKEGEKGWFSLEELNERLRKLREIEEKEYESRIGGYYSGIRES 315

Query: 842  MAKWXXXXXXXXXXXXXXXVQRIDMLNNLGAEQDFMLSPPKEHLVEKYFHPDNMSSAEKL 663
            + K                   I  LN      DFM  PPKEHLVEKYFHPDNMSSAEK+
Sbjct: 316  LIKLKDEKAEKSSIP-------IQRLNLFSTTPDFMQYPPKEHLVEKYFHPDNMSSAEKM 368

Query: 662  KIELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLSTALHKKDKHSLKGLQAMVQXXXXX 483
            KI L KVR+EFKMSESDCGSARVQVAQLTTKIKHLS+ LHKKDKHS KGLQ MVQ     
Sbjct: 369  KIGLSKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQKRKKL 428

Query: 482  XXXXXRTDWDSYCLVLSKLGLRDNPDYK 399
                 RTDWDSYC VLSKLGLRDNPD+K
Sbjct: 429  LKYLRRTDWDSYCFVLSKLGLRDNPDFK 456


>ref|XP_004167412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229401
            [Cucumis sativus]
          Length = 449

 Score =  225 bits (573), Expect = 2e-56
 Identities = 120/221 (54%), Positives = 151/221 (68%), Gaps = 1/221 (0%)
 Frame = -1

Query: 1058 GGDEALEGEPFLAYNYEDLGKKLMNLRPEKKKDERNWFSLQELSERLHKLRANDVNDMKS 879
            G +  L+ E    Y+Y++LG KL NLRP+K+K  +NWFSL EL++RL KLR  +  + +S
Sbjct: 231  GKNVGLKTEFVKMYSYDELGNKLRNLRPDKEKG-KNWFSLTELNDRLVKLRTMEEKETES 289

Query: 878  APKNL-FIEIRSCMAKWXXXXXXXXXXXXXXXVQRIDMLNNLGAEQDFMLSPPKEHLVEK 702
                + F ++R+ + +                 QR+D++  L    ++ML PP EHLVEK
Sbjct: 290  RIGGISFQDLRASLMQMKISDDEREKKRHVI--QRLDIMGQLVRTPNYMLEPPNEHLVEK 347

Query: 701  YFHPDNMSSAEKLKIELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLSTALHKKDKHSL 522
            YFHPDNMSSAEK+KIEL KVR++FKMSESDCGSARVQVAQLTTKI HL+  LHKKDKHS 
Sbjct: 348  YFHPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSK 407

Query: 521  KGLQAMVQXXXXXXXXXXRTDWDSYCLVLSKLGLRDNPDYK 399
            KGL  MVQ          RTDWDSYC++L+ LGLRDNPDYK
Sbjct: 408  KGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 448


>ref|XP_004152189.1| PREDICTED: uncharacterized protein LOC101212028 [Cucumis sativus]
          Length = 449

 Score =  225 bits (573), Expect = 2e-56
 Identities = 120/221 (54%), Positives = 151/221 (68%), Gaps = 1/221 (0%)
 Frame = -1

Query: 1058 GGDEALEGEPFLAYNYEDLGKKLMNLRPEKKKDERNWFSLQELSERLHKLRANDVNDMKS 879
            G +  L+ E    Y+Y++LG KL NLRP+K+K  +NWFSL EL++RL KLR  +  + +S
Sbjct: 232  GKNVGLKTEFVKMYSYDELGNKLRNLRPDKEKG-KNWFSLTELNDRLVKLRTMEEKETES 290

Query: 878  APKNL-FIEIRSCMAKWXXXXXXXXXXXXXXXVQRIDMLNNLGAEQDFMLSPPKEHLVEK 702
                + F ++R+ + +                 QR+D++  L    ++ML PP EHLVEK
Sbjct: 291  RIGGISFQDLRASLMQMKISDDEREKKATL---QRLDIMGQLVRTPNYMLEPPNEHLVEK 347

Query: 701  YFHPDNMSSAEKLKIELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLSTALHKKDKHSL 522
            YFHPDNMSSAEK+KIEL KVR++FKMSESDCGSARVQVAQLTTKI HL+  LHKKDKHS 
Sbjct: 348  YFHPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSK 407

Query: 521  KGLQAMVQXXXXXXXXXXRTDWDSYCLVLSKLGLRDNPDYK 399
            KGL  MVQ          RTDWDSYC++L+ LGLRDNPDYK
Sbjct: 408  KGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 448


>ref|NP_563982.1| S15/NS1, RNA-binding protein [Arabidopsis thaliana]
            gi|8927660|gb|AAF82151.1|AC034256_15 Contains similarity
            to an unknown protein T21F11.5 gi|6730725 from
            Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains
            a Ribosomal Protein S15 PF|00312 domain [Arabidopsis
            thaliana] gi|13605577|gb|AAK32782.1|AF361614_1
            At1g15810/F7H2_23 [Arabidopsis thaliana]
            gi|22137170|gb|AAM91430.1| At1g15810/F7H2_23 [Arabidopsis
            thaliana] gi|332191247|gb|AEE29368.1| S15/NS1,
            RNA-binding protein [Arabidopsis thaliana]
          Length = 419

 Score =  224 bits (570), Expect = 4e-56
 Identities = 123/220 (55%), Positives = 150/220 (68%)
 Frame = -1

Query: 1058 GGDEALEGEPFLAYNYEDLGKKLMNLRPEKKKDERNWFSLQELSERLHKLRANDVNDMKS 879
            G  E    E  + YN E+LG+KL  LRPE +K E  WFSL+EL++RL KLR  +  + + 
Sbjct: 207  GETEEAMTEFLMFYNEEELGEKLRTLRPEGEKKE-GWFSLEELNQRLVKLRQVEEKEAQY 265

Query: 878  APKNLFIEIRSCMAKWXXXXXXXXXXXXXXXVQRIDMLNNLGAEQDFMLSPPKEHLVEKY 699
              KN F ++R+ ++ +                Q + ++ +LG   ++ L PPKE LV+ Y
Sbjct: 266  RTKN-FAQLRNVISSFKNENSEASSQ------QNVAIMGHLGGIPEYKLLPPKEDLVDTY 318

Query: 698  FHPDNMSSAEKLKIELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLSTALHKKDKHSLK 519
            FHPDNMSSAEK+KIEL KVR+EFKMSESDCGSARVQVAQLTTKIKHLS++LHKKDKHS K
Sbjct: 319  FHPDNMSSAEKMKIELSKVREEFKMSESDCGSARVQVAQLTTKIKHLSSSLHKKDKHSRK 378

Query: 518  GLQAMVQXXXXXXXXXXRTDWDSYCLVLSKLGLRDNPDYK 399
            GL  MVQ          RTDWDSYCLVLSKL LRDNPDYK
Sbjct: 379  GLLGMVQKRKKLLKYLRRTDWDSYCLVLSKLSLRDNPDYK 418


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