BLASTX nr result

ID: Lithospermum22_contig00004706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004706
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246...   104   5e-22
ref|XP_002523099.1| conserved hypothetical protein [Ricinus comm...   105   3e-21
ref|XP_002321001.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20
ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II tra...    99   2e-20
ref|XP_003630135.1| hypothetical protein MTR_8g092180 [Medicago ...   102   6e-20

>ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246950 [Vitis vinifera]
          Length = 139

 Score =  104 bits (259), Expect(2) = 5e-22
 Identities = 51/74 (68%), Positives = 59/74 (79%)
 Frame = +1

Query: 4   KSEMIQCVAAMETALLPCLPAGELQAIDRSSRPSLQIDVERHASDFMEAAKKLQLYLTAL 183
           + +MI CV A+E ALLPCLPA ELQAIDRS  PS QIDVERHA DFMEAAKKLQ+Y  +L
Sbjct: 22  RQDMIACVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQVYFISL 81

Query: 184 QHEDKPNMAGTLKR 225
           Q ED+P  A TL++
Sbjct: 82  QREDQPTKAETLRK 95



 Score = 25.8 bits (55), Expect(2) = 5e-22
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +3

Query: 315 DKLIQGWRKDVQAQL 359
           ++LIQGWRK+++ QL
Sbjct: 115 ERLIQGWRKELKDQL 129


>ref|XP_002523099.1| conserved hypothetical protein [Ricinus communis]
           gi|223537661|gb|EEF39284.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  105 bits (262), Expect(2) = 3e-21
 Identities = 52/72 (72%), Positives = 58/72 (80%)
 Frame = +1

Query: 10  EMIQCVAAMETALLPCLPAGELQAIDRSSRPSLQIDVERHASDFMEAAKKLQLYLTALQH 189
           +MI+CV A+E ALLPCLPA ELQAIDRS  PS QIDVERHA DFMEAAKKLQLY   LQ 
Sbjct: 25  DMIECVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQR 84

Query: 190 EDKPNMAGTLKR 225
           ED+P  A TL++
Sbjct: 85  EDQPTAAETLRK 96



 Score = 21.9 bits (45), Expect(2) = 3e-21
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 315 DKLIQGWRKDVQAQL 359
           ++LIQ WRK++  QL
Sbjct: 116 ERLIQEWRKELTDQL 130


>ref|XP_002321001.1| predicted protein [Populus trichocarpa] gi|222861774|gb|EEE99316.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  104 bits (259), Expect(2) = 1e-20
 Identities = 52/71 (73%), Positives = 57/71 (80%)
 Frame = +1

Query: 13  MIQCVAAMETALLPCLPAGELQAIDRSSRPSLQIDVERHASDFMEAAKKLQLYLTALQHE 192
           MI CV A+E ALLPCLPA ELQAIDRS  PS QIDVERHA DFMEAAKKLQLY   LQ E
Sbjct: 1   MIGCVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQRE 60

Query: 193 DKPNMAGTLKR 225
           D+P M+ TL++
Sbjct: 61  DQPTMSETLRK 71



 Score = 21.2 bits (43), Expect(2) = 1e-20
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 315 DKLIQGWRKDVQAQ 356
           ++LIQGW K+++ Q
Sbjct: 91  ERLIQGWWKELKDQ 104


>ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           28-like [Cucumis sativus]
           gi|449484322|ref|XP_004156851.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 28-like [Cucumis
           sativus]
          Length = 141

 Score = 99.0 bits (245), Expect(2) = 2e-20
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = +1

Query: 4   KSEMIQCVAAMETALLPCLPAGELQAIDRSSRPSLQIDVERHASDFMEAAKKLQLYLTAL 183
           + +MI  V A+E ALLPCLPA ELQAIDRS  PS Q+DVERHA DFMEAAKKLQLY   L
Sbjct: 24  REDMIAYVMALEAALLPCLPARELQAIDRSPHPSHQVDVERHARDFMEAAKKLQLYFIGL 83

Query: 184 QHEDKPNMAGTLKR 225
           Q ED+P    TL++
Sbjct: 84  QREDQPTKVETLRK 97



 Score = 26.2 bits (56), Expect(2) = 2e-20
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +3

Query: 315 DKLIQGWRKDVQAQL 359
           +KLI+GW+KD++ QL
Sbjct: 117 EKLIEGWKKDLKDQL 131


>ref|XP_003630135.1| hypothetical protein MTR_8g092180 [Medicago truncatula]
           gi|355524157|gb|AET04611.1| hypothetical protein
           MTR_8g092180 [Medicago truncatula]
          Length = 115

 Score =  102 bits (254), Expect = 6e-20
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = +1

Query: 13  MIQCVAAMETALLPCLPAGELQAIDRSSRPSLQIDVERHASDFMEAAKKLQLYLTALQHE 192
           MI CV A+E ALLPCLPA ELQAIDRS  PS QIDV+RHA DFMEAAKKLQLY  +LQ E
Sbjct: 1   MISCVMALEAALLPCLPARELQAIDRSPHPSHQIDVDRHARDFMEAAKKLQLYFISLQRE 60

Query: 193 DKPNMAGTLKR 225
           DKP  A  L++
Sbjct: 61  DKPTKAEMLRK 71


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