BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004691
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X9A0.1|RCA1_LARTR RecName: Full=Ribulose bisphosphate carbo...   112   1e-37
sp|Q7X999.1|RCA2_LARTR RecName: Full=Ribulose bisphosphate carbo...   112   1e-37
gb|AAG61121.1|AF329935_1 ribulose-1,5-bisphosphate carboxylase/o...   108   3e-37
sp|O98997.2|RCA_PHAAU RecName: Full=Ribulose bisphosphate carbox...   103   5e-37
gb|AAG61120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase a...   103   5e-37

>sp|Q7X9A0.1|RCA1_LARTR RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase
           1, chloroplastic; Short=RA 1; Short=RuBisCO activase 1;
           AltName: Full=RuBisCO activase alpha form; Flags:
           Precursor gi|32481065|gb|AAP83929.1| Rubisco activase
           alpha form precursor [Larrea tridentata]
          Length = 476

 Score =  112 bits (279), Expect(2) = 1e-37
 Identities = 59/97 (60%), Positives = 69/97 (71%)
 Frame = +2

Query: 110 ASLIPTSAFFGXXXXXXXXXXXXXXASGSFKVSANATDPGNEQVQTSKDKWKGLAYDISD 289
           ASL+P++AFFG              +SG+FK+ A      +E  QT KDKWKGLAYDISD
Sbjct: 25  ASLVPSTAFFGSSLKKSAAKFPKA-SSGNFKIVAQEI---SEDQQTDKDKWKGLAYDISD 80

Query: 290 DQQDITRGKGMVDTLFQAPMGDGTHVPVLNSYEYISQ 400
           DQQDITRGKGMVDTLFQAPM  GTH  V++SY+YISQ
Sbjct: 81  DQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQ 117



 Score = 70.1 bits (170), Expect(2) = 1e-37
 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 2/46 (4%)
 Frame = +1

Query: 451 EYISQGLR--TLDNRTKDGFYIAPAFMDKLIVHITKNFMTLPNIKV 582
           +YISQGLR   LDN   DGFYIAPAFMDKL+VHITKNF++LPNIK+
Sbjct: 113 DYISQGLRQYNLDNNM-DGFYIAPAFMDKLVVHITKNFLSLPNIKI 157


>sp|Q7X999.1|RCA2_LARTR RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase
           2, chloroplastic; Short=RA 2; Short=RuBisCO activase 2;
           AltName: Full=RuBisCO activase beta form; Flags:
           Precursor gi|32481067|gb|AAP83930.1| Rubisco activase
           beta form precursor [Larrea tridentata]
          Length = 435

 Score =  112 bits (279), Expect(2) = 1e-37
 Identities = 59/97 (60%), Positives = 69/97 (71%)
 Frame = +2

Query: 110 ASLIPTSAFFGXXXXXXXXXXXXXXASGSFKVSANATDPGNEQVQTSKDKWKGLAYDISD 289
           ASL+P++AFFG              +SG+FK+ A      +E  QT KDKWKGLAYDISD
Sbjct: 25  ASLVPSTAFFGSSLKKSAAKFPKA-SSGNFKIVAQEI---SEDQQTDKDKWKGLAYDISD 80

Query: 290 DQQDITRGKGMVDTLFQAPMGDGTHVPVLNSYEYISQ 400
           DQQDITRGKGMVDTLFQAPM  GTH  V++SY+YISQ
Sbjct: 81  DQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQ 117



 Score = 70.1 bits (170), Expect(2) = 1e-37
 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 2/46 (4%)
 Frame = +1

Query: 451 EYISQGLR--TLDNRTKDGFYIAPAFMDKLIVHITKNFMTLPNIKV 582
           +YISQGLR   LDN   DGFYIAPAFMDKL+VHITKNF++LPNIK+
Sbjct: 113 DYISQGLRQYNLDNNM-DGFYIAPAFMDKLVVHITKNFLSLPNIKI 157


>gb|AAG61121.1|AF329935_1 ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2
           [Gossypium hirsutum]
          Length = 435

 Score =  108 bits (271), Expect(2) = 3e-37
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = +2

Query: 188 SGSFKVSANATDPGNEQVQTSKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMGDGTHV 367
           SGSFKV A A    +E+ QT KD+WKGLAYDISDDQQDITRGKGMVD+LFQAPM DGTH 
Sbjct: 9   SGSFKVMA-AEKEIDEETQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPMNDGTHY 67

Query: 368 PVLNSYEYISQ 400
            V++SYEYISQ
Sbjct: 68  AVMSSYEYISQ 78



 Score = 72.0 bits (175), Expect(2) = 3e-37
 Identities = 37/46 (80%), Positives = 41/46 (89%), Gaps = 2/46 (4%)
 Frame = +1

Query: 451 EYISQGLRT--LDNRTKDGFYIAPAFMDKLIVHITKNFMTLPNIKV 582
           EYISQGL+T  LDN   DGFYIAPAFMDKL+VHI+KNFM+LPNIKV
Sbjct: 74  EYISQGLKTYNLDNNM-DGFYIAPAFMDKLVVHISKNFMSLPNIKV 118


>sp|O98997.2|RCA_PHAAU RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic; Short=RA; Short=RuBisCO activase; Flags:
           Precursor gi|8954287|gb|AAD20019.2| rubisco activase
           [Vigna radiata]
          Length = 439

 Score =  103 bits (257), Expect(2) = 5e-37
 Identities = 57/99 (57%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
 Frame = +2

Query: 107 AASLIPTSAFFGXXXXXXXXXXXXXX--ASGSFKVSANATDPGNEQVQTSKDKWKGLAYD 280
           A +  PTSAFFG                 +GSFK+ A A     E  QT+KD+WKGLAYD
Sbjct: 23  AGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVA-AEKEIEESQQTNKDRWKGLAYD 81

Query: 281 ISDDQQDITRGKGMVDTLFQAPMGDGTHVPVLNSYEYIS 397
           ISDDQQDITRGKGMVD LFQAPM  GTH  V++SYEY+S
Sbjct: 82  ISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLS 120



 Score = 76.6 bits (187), Expect(2) = 5e-37
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = +1

Query: 451 EYISQGLRTLDNRTKDGFYIAPAFMDKLIVHITKNFMTLPNIKV 582
           EY+S GLR LDN  KDGFYIAPAF+DKL+VHITKNFMTLPNIKV
Sbjct: 117 EYLSTGLRQLDN-IKDGFYIAPAFLDKLVVHITKNFMTLPNIKV 159


>gb|AAG61120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1
           [Gossypium hirsutum]
          Length = 438

 Score =  103 bits (258), Expect(2) = 5e-37
 Identities = 56/100 (56%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
 Frame = +2

Query: 107 AASLIPTSAFFGXXXXXXXXXXXXXXAS--GSFKVSANATDPGNEQVQTSKDKWKGLAYD 280
           A +  P+SAF G               +  GSFK+ A      +E  QT +D+WKGLAYD
Sbjct: 23  AGASAPSSAFMGNSLKKVSARFNNNGKAPVGSFKIVA--AKEIDEDTQTDQDRWKGLAYD 80

Query: 281 ISDDQQDITRGKGMVDTLFQAPMGDGTHVPVLNSYEYISQ 400
           ISDDQQDITRGKGMVD+LFQAPM DGTH  V++SYEYISQ
Sbjct: 81  ISDDQQDITRGKGMVDSLFQAPMNDGTHYAVMSSYEYISQ 120



 Score = 76.3 bits (186), Expect(2) = 5e-37
 Identities = 37/45 (82%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
 Frame = +1

Query: 451 EYISQGLRTLD-NRTKDGFYIAPAFMDKLIVHITKNFMTLPNIKV 582
           EYISQGLRT D +   DGFYIAPAFMDKL+VHITKN+MTLPNIKV
Sbjct: 116 EYISQGLRTYDLDNNMDGFYIAPAFMDKLVVHITKNYMTLPNIKV 160