BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004676
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]                  472   e-131
ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22...   469   e-130
gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tu...   469   e-130
sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4 gi|...   469   e-130
ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [...   468   e-130

>dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]
          Length = 264

 Score =  472 bits (1215), Expect = e-131
 Identities = 234/264 (88%), Positives = 241/264 (91%)
 Frame = -2

Query: 978 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 799
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 798 VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 619
           VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 618 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDXXXX 439
           FKLCKVRSVQFG+KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKI DFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIADFIKFDVGNV 180

Query: 438 XXXXXXXXXXXXXVIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 259
                        VIKNREKHKGSFET+H+QDS GHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETVHIQDSLGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 258 GKGIKLSIIEEARKRLAAQSAAPA 187
           GKGIKL+IIEEARKR  AQSA  A
Sbjct: 241 GKGIKLTIIEEARKRNVAQSATTA 264


>ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22138108|gb|AAM93434.1|
           40S ribosomal S4 protein [Glycine max]
           gi|255641970|gb|ACU21252.1| unknown [Glycine max]
          Length = 264

 Score =  469 bits (1208), Expect = e-130
 Identities = 231/264 (87%), Positives = 242/264 (91%)
 Frame = -2

Query: 978 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 799
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 798 VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 619
           V +ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+E+K
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 618 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDXXXX 439
           FKLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 438 XXXXXXXXXXXXXVIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 259
                        VIKNREKHKGSFETIHVQDSTGHEFATR+GNV+TIGKGTKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 258 GKGIKLSIIEEARKRLAAQSAAPA 187
           GKGIKLSIIEEARKR+AAQ A  A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQATAA 264


>gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tuberosum]
          Length = 264

 Score =  469 bits (1206), Expect = e-130
 Identities = 229/264 (86%), Positives = 243/264 (92%)
 Frame = -2

Query: 978 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 799
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 798 VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 619
           V SILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEESK
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 618 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDXXXX 439
           FKLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 438 XXXXXXXXXXXXXVIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 259
                        VIKNREKHKGSFET+H+QDS GHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 258 GKGIKLSIIEEARKRLAAQSAAPA 187
           GKGIKL+IIEEA+KRLAAQSA PA
Sbjct: 241 GKGIKLTIIEEAKKRLAAQSATPA 264


>sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4 gi|457803|emb|CAA54095.1|
           ribosomal protein S4 [Solanum tuberosum]
          Length = 264

 Score =  469 bits (1206), Expect = e-130
 Identities = 229/264 (86%), Positives = 243/264 (92%)
 Frame = -2

Query: 978 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 799
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 798 VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 619
           V SILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEESK
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 618 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDXXXX 439
           FKLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 438 XXXXXXXXXXXXXVIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 259
                        VIKNREKHKGSFET+H+QDS GHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 258 GKGIKLSIIEEARKRLAAQSAAPA 187
           GKGIKL+IIE+ARKRLAAQSA PA
Sbjct: 241 GKGIKLTIIEDARKRLAAQSATPA 264


>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  468 bits (1205), Expect = e-130
 Identities = 230/264 (87%), Positives = 242/264 (91%)
 Frame = -2

Query: 978 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 799
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 798 VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 619
           V +ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+E+K
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 618 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDXXXX 439
           FKLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 438 XXXXXXXXXXXXXVIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 259
                        VIKNREKHKGSFETIHVQD+TGHEFATR+GNV+TIGKGTKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 258 GKGIKLSIIEEARKRLAAQSAAPA 187
           GKGIKLSIIEEARKR+AAQ A  A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQATAA 264