BLASTX nr result
ID: Lithospermum22_contig00004649
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00004649
(1107 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast... 122 3e-29
sp|Q43364.1|EFTUB_NICSY RecName: Full=Elongation factor TuB, chl... 123 4e-29
dbj|BAA01975.1| chloroplast elongation factor TuB (EF-TuB) [Nico... 123 4e-29
ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplast... 122 7e-29
ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|2... 123 7e-29
>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1 [Vitis
vinifera] gi|359488736|ref|XP_003633809.1| PREDICTED:
elongation factor Tu, chloroplastic-like isoform 2 [Vitis
vinifera] gi|359488738|ref|XP_003633810.1| PREDICTED:
elongation factor Tu, chloroplastic-like isoform 3 [Vitis
vinifera]
Length = 487
Score = 122 bits (306), Expect(3) = 3e-29
Identities = 75/134 (55%), Positives = 82/134 (61%), Gaps = 31/134 (23%)
Frame = -3
Query: 1018 MMGYVDSYIPIRQRQTDLRFLMAIEDMFSIR------------------DIVDIVGXXXX 893
+M VDSYIPI QRQTDL FL+A+ED+FSI + VD+VG
Sbjct: 280 LMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLRET 339
Query: 892 XXXXXXXVEMFQKTLDEALAVDNVGLLLRGIQKMDIQRGMVL-------------AIVYV 752
VEMFQK LDEALA DNVGLLLRGIQK DIQRGMVL AIVY+
Sbjct: 340 RATTVTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMVLAKPGTITPHTKFSAIVYI 399
Query: 751 LKKEEGGRHFPFFA 710
LKKEEGGRH PFFA
Sbjct: 400 LKKEEGGRHSPFFA 413
Score = 29.3 bits (64), Expect(3) = 3e-29
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1
Query: 717 FLRYRRQFYMRTTDTDVTGK 658
F YR QFYMRT TDVTGK
Sbjct: 412 FAGYRPQFYMRT--TDVTGK 429
Score = 24.3 bits (51), Expect(3) = 3e-29
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 1094 IPIVSGSXXXXXXXXXXKSGIKRGDND 1014
IPIVSGS IKRG+N+
Sbjct: 246 IPIVSGSALLALEALMANPSIKRGENE 272
>sp|Q43364.1|EFTUB_NICSY RecName: Full=Elongation factor TuB, chloroplastic; Short=EF-TuB;
Flags: Precursor gi|459241|dbj|BAA02028.1| chloroplast
elongation factor TuB(EF-TuB) [Nicotiana sylvestris]
Length = 485
Score = 123 bits (308), Expect(3) = 4e-29
Identities = 76/134 (56%), Positives = 83/134 (61%), Gaps = 31/134 (23%)
Frame = -3
Query: 1018 MMGYVDSYIPIRQRQTDLRFLMAIEDMFSIR------------------DIVDIVGXXXX 893
+M VD YIPI QRQT+L FLMAIED+FSI +IVDIVG
Sbjct: 278 LMDNVDEYIPIPQRQTELPFLMAIEDVFSITGRGTVATGRVERGTVKVGEIVDIVGLKDT 337
Query: 892 XXXXXXXVEMFQKTLDEALAVDNVGLLLRGIQKMDIQRGMVL-------------AIVYV 752
VEMFQK LDEA+A DNVGLLLRGIQK+DIQRGMVL A+VYV
Sbjct: 338 RNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFEALVYV 397
Query: 751 LKKEEGGRHFPFFA 710
LKKEEGGRH PFFA
Sbjct: 398 LKKEEGGRHSPFFA 411
Score = 29.3 bits (64), Expect(3) = 4e-29
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1
Query: 717 FLRYRRQFYMRTTDTDVTGK 658
F YR QFYMRT TDVTGK
Sbjct: 410 FAGYRPQFYMRT--TDVTGK 427
Score = 23.1 bits (48), Expect(3) = 4e-29
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 1094 IPIVSGSXXXXXXXXXXKSGIKRGDN 1017
IPI+SGS IKRG+N
Sbjct: 244 IPIISGSALLALEALMANPSIKRGEN 269
>dbj|BAA01975.1| chloroplast elongation factor TuB (EF-TuB) [Nicotiana sylvestris]
Length = 425
Score = 123 bits (308), Expect(3) = 4e-29
Identities = 76/134 (56%), Positives = 83/134 (61%), Gaps = 31/134 (23%)
Frame = -3
Query: 1018 MMGYVDSYIPIRQRQTDLRFLMAIEDMFSIR------------------DIVDIVGXXXX 893
+M VD YIPI QRQT+L FLMAIED+FSI +IVDIVG
Sbjct: 218 LMDNVDEYIPIPQRQTELPFLMAIEDVFSITGRGTVATGRVERGTVKVGEIVDIVGLKDT 277
Query: 892 XXXXXXXVEMFQKTLDEALAVDNVGLLLRGIQKMDIQRGMVL-------------AIVYV 752
VEMFQK LDEA+A DNVGLLLRGIQK+DIQRGMVL A+VYV
Sbjct: 278 RNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFEALVYV 337
Query: 751 LKKEEGGRHFPFFA 710
LKKEEGGRH PFFA
Sbjct: 338 LKKEEGGRHSPFFA 351
Score = 29.3 bits (64), Expect(3) = 4e-29
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1
Query: 717 FLRYRRQFYMRTTDTDVTGK 658
F YR QFYMRT TDVTGK
Sbjct: 350 FAGYRPQFYMRT--TDVTGK 367
Score = 23.1 bits (48), Expect(3) = 4e-29
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 1094 IPIVSGSXXXXXXXXXXKSGIKRGDN 1017
IPI+SGS IKRG+N
Sbjct: 184 IPIISGSALLALEALMANPSIKRGEN 209
>ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplastic-like [Vitis vinifera]
Length = 486
Score = 122 bits (307), Expect(3) = 7e-29
Identities = 76/134 (56%), Positives = 82/134 (61%), Gaps = 31/134 (23%)
Frame = -3
Query: 1018 MMGYVDSYIPIRQRQTDLRFLMAIEDMFSIR------------------DIVDIVGXXXX 893
+M VDSYIPI QRQTDL FL+AIED+FSI + VDIVG
Sbjct: 279 LMDSVDSYIPIPQRQTDLPFLLAIEDVFSITGRGTVATGRVERGTIKVGETVDIVGLKDT 338
Query: 892 XXXXXXXVEMFQKTLDEALAVDNVGLLLRGIQKMDIQRGMVL-------------AIVYV 752
VEMFQK LDEALA DNVG+LLRG+QK DIQRGMVL AIVYV
Sbjct: 339 RSTTVTGVEMFQKILDEALAGDNVGILLRGVQKADIQRGMVLAKPGTITPHTKFAAIVYV 398
Query: 751 LKKEEGGRHFPFFA 710
LKKEEGGRH PFFA
Sbjct: 399 LKKEEGGRHSPFFA 412
Score = 29.3 bits (64), Expect(3) = 7e-29
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1
Query: 717 FLRYRRQFYMRTTDTDVTGK 658
F YR QFYMRT TDVTGK
Sbjct: 411 FAGYRPQFYMRT--TDVTGK 428
Score = 22.7 bits (47), Expect(3) = 7e-29
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 1094 IPIVSGSXXXXXXXXXXKSGIKRGDN 1017
+PI+SGS IKRG+N
Sbjct: 245 VPIISGSALLALEALMANPSIKRGEN 270
>ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|222845322|gb|EEE82869.1|
predicted protein [Populus trichocarpa]
Length = 483
Score = 123 bits (309), Expect(3) = 7e-29
Identities = 76/134 (56%), Positives = 82/134 (61%), Gaps = 31/134 (23%)
Frame = -3
Query: 1018 MMGYVDSYIPIRQRQTDLRFLMAIEDMFSIR------------------DIVDIVGXXXX 893
+M VD+YIPI QRQTDL FL+A+ED+FSI D VDIVG
Sbjct: 276 LMDNVDNYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIRTGDTVDIVGLRET 335
Query: 892 XXXXXXXVEMFQKTLDEALAVDNVGLLLRGIQKMDIQRGMVL-------------AIVYV 752
VEMFQK LDEALA DNVGLLLRG+QK DIQRGMVL AIVYV
Sbjct: 336 RNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGMVLSKPGSITPHTKFEAIVYV 395
Query: 751 LKKEEGGRHFPFFA 710
LKKEEGGRH PFFA
Sbjct: 396 LKKEEGGRHSPFFA 409
Score = 28.1 bits (61), Expect(3) = 7e-29
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 717 FLRYRRQFYMRTTDTDVTGK 658
F YR QFYMRT TDVTG+
Sbjct: 408 FAGYRPQFYMRT--TDVTGR 425
Score = 23.1 bits (48), Expect(3) = 7e-29
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 1094 IPIVSGSXXXXXXXXXXKSGIKRGDN 1017
IPI+SGS IKRG+N
Sbjct: 242 IPIISGSALLALEALMENPAIKRGEN 267