BLASTX nr result

ID: Lithospermum22_contig00004648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004648
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543249.1| PREDICTED: nucleolar GTP-binding protein 2-l...   111   7e-23
ref|XP_002528567.1| GTP-binding protein, putative [Ricinus commu...   111   7e-23
ref|XP_003540457.1| PREDICTED: nucleolar GTP-binding protein 2-l...   109   2e-22
emb|CBI20326.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002284849.1| PREDICTED: nucleolar GTP-binding protein 2-l...   109   2e-22

>ref|XP_003543249.1| PREDICTED: nucleolar GTP-binding protein 2-like [Glycine max]
          Length = 549

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   LNDHQKQARVHLLDTQPFADAFGPKNKRKRPNLVASDYEALLKKADSSQDAFEKKHVDSP 180
           LNDHQKQARVHLLD +PF DAFGPK KRKRP+L+A+DYE+LLKKAD SQDAFE+K+  S 
Sbjct: 117 LNDHQKQARVHLLDREPFQDAFGPKTKRKRPSLMAADYESLLKKADGSQDAFEQKYGSSV 176

Query: 181 STDGN-EDGFRD 213
           S + N EDGFRD
Sbjct: 177 SAEANDEDGFRD 188


>ref|XP_002528567.1| GTP-binding protein, putative [Ricinus communis]
           gi|223532011|gb|EEF33822.1| GTP-binding protein,
           putative [Ricinus communis]
          Length = 559

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   LNDHQKQARVHLLDTQPFADAFGPKNKRKRPNLVASDYEALLKKADSSQDAFEKKH-VDS 177
           LNDHQKQARVHLLDT+PF DAFGPK KRKRP L+A+DYE+LLKKAD SQD FE KH  D+
Sbjct: 116 LNDHQKQARVHLLDTEPFEDAFGPKRKRKRPKLLAADYESLLKKADGSQDVFETKHGTDA 175

Query: 178 PSTDGNEDGFRD 213
           P+     DGFRD
Sbjct: 176 PAEGSEGDGFRD 187


>ref|XP_003540457.1| PREDICTED: nucleolar GTP-binding protein 2-like [Glycine max]
          Length = 549

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/72 (75%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   LNDHQKQARVHLLDTQPFADAFGPKNKRKRPNLVASDYEALLKKADSSQDAFEKKHVDSP 180
           LNDHQKQARVHLLD +PF DAFGPK KRKRP L+A+DYE+LLKKAD SQDAFE+K+  S 
Sbjct: 117 LNDHQKQARVHLLDREPFQDAFGPKTKRKRPILLAADYESLLKKADGSQDAFEEKYGSSV 176

Query: 181 STDGN-EDGFRD 213
           S + N EDGFRD
Sbjct: 177 SAEANDEDGFRD 188


>emb|CBI20326.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   LNDHQKQARVHLLDTQPFADAFGPKNKRKRPNLVASDYEALLKKADSSQDAFEKKHVDSP 180
           LNDHQKQARVHLLDT+PF DAFGPK KR RP L+A DYE+L+KKAD SQDAFE+KH  S 
Sbjct: 76  LNDHQKQARVHLLDTEPFEDAFGPKKKRIRPKLMAMDYESLVKKADGSQDAFEQKHAGSA 135

Query: 181 STDGNE-DGFRD 213
             +G+E DGFRD
Sbjct: 136 YAEGSEGDGFRD 147


>ref|XP_002284849.1| PREDICTED: nucleolar GTP-binding protein 2-like [Vitis vinifera]
          Length = 530

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   LNDHQKQARVHLLDTQPFADAFGPKNKRKRPNLVASDYEALLKKADSSQDAFEKKHVDSP 180
           LNDHQKQARVHLLDT+PF DAFGPK KR RP L+A DYE+L+KKAD SQDAFE+KH  S 
Sbjct: 116 LNDHQKQARVHLLDTEPFEDAFGPKKKRIRPKLMAMDYESLVKKADGSQDAFEQKHAGSA 175

Query: 181 STDGNE-DGFRD 213
             +G+E DGFRD
Sbjct: 176 YAEGSEGDGFRD 187


Top