BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004641
         (1363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   200   6e-49
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...   190   6e-46
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           184   4e-44
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   184   4e-44
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   184   5e-44

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  200 bits (509), Expect = 6e-49
 Identities = 105/310 (33%), Positives = 172/310 (55%), Gaps = 10/310 (3%)
 Frame = +1

Query: 7    LVDKIRSKIEGWSSKHISYAGKLVLINSVFFDLVNYWCQSVFIPEVVCKEIEKIIRSFLW 186
            LVD+I SK+  W+ + +SYAG++ LINSV F +  YW     +P  V K +E+I++SFLW
Sbjct: 76   LVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLW 135

Query: 187  RG---KSESNGVSWKTVILPKKEGGLGVKSIAEWNLTCMSQHILNIYRNKEG-MWIKWIN 354
             G   ++    V+W  V LPKKEGGLG+KSI EWN   + +HI N+  + +G +W  WI 
Sbjct: 136  SGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIR 195

Query: 355  TYMMKGKSVWGVKPKRTDSWTWIELLKIRVSLKPFIQYAVGNGENVSFLFDSWHKLGFLN 534
            + +++G++ W +K  +  SW W ++LK+R    P ++Y +G+G   S  FD+WH    L 
Sbjct: 196  SNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLA 255

Query: 535  ENMSIRDISLLRIDPNDSVARALKKIKWPR------GRHATEMLSVCEGGLPELNPDCSH 696
            ++   R I    +  N  V   ++  +W        G H   + ++     P++      
Sbjct: 256  DSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPI-IEAIPSNSNPKMGQKDEL 314

Query: 697  VVL*NGALNVSSSVIWNVIRRN*PKPAWYNLVWFKGSIPKYSFILWLLCNGKMQTKDKLC 876
            V L +     S  V W  +RR+     W+++VWFK ++P++SF+LW+    K+ T+DKL 
Sbjct: 315  VWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLH 374

Query: 877  S*GVVEDSKC 906
              G+   ++C
Sbjct: 375  RFGIHGPNRC 384


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  190 bits (483), Expect = 6e-46
 Identities = 110/319 (34%), Positives = 165/319 (51%), Gaps = 13/319 (4%)
 Frame = +1

Query: 4   PLVDKIRSKIEGWSSKHISYAGKLVLINSVFFDLVNYWCQSVFIPEVVCKEIEKIIRSFL 183
           PL+++IR +I  W+++H+S+AG+L LI+SV   L N+W  +  +P    KEI+ +  +FL
Sbjct: 8   PLIERIRERISCWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLPNACIKEIDGLCSAFL 67

Query: 184 WRG---KSESNGVSWKTVILPKKEGGLGVKSIAEWNLTCMSQHILNIYRNKEGMWIKWIN 354
           W G     +   VSW  V +PK+EGGLG++S+ E N  C  + I  +  +   +W++W+ 
Sbjct: 68  WSGPELNRKKAKVSWNDVCMPKEEGGLGLRSLTEANKVCCLKLIWRLL-SSSSLWVQWLR 126

Query: 355 TYMMKGKSVWGVKPKRT-DSWTWIELLKIRVSLKPFIQYAVGNGENVSFLFDSWHKLGFL 531
            Y+++  S W ++   T  SW W +LLK R     F QY + NG+ VSF  D+W  LG L
Sbjct: 127 QYVIRKGSFWSLRDTSTLGSWMWRKLLKYRHLASGFTQYEIRNGKGVSFWHDNWSPLGPL 186

Query: 532 NENMSIRDISLLRIDPNDSVARALKKIKWPRGRHATEMLSVCEGGLPELNP----DCSHV 699
                 R    + ID + +VA AL      R RH  + L+  E  L EL      +   V
Sbjct: 187 IAISGTRGCIDMGIDIHATVAEALTH---RRRRHRADHLNQMEAQLEELRTKGLVETEDV 243

Query: 700 VL*NG-----ALNVSSSVIWNVIRRN*PKPAWYNLVWFKGSIPKYSFILWLLCNGKMQTK 864
           VL  G       + S+   W   R   P+  WY  +WF  + PKYSFI WL    ++ T 
Sbjct: 244 VLWKGKGGRFKPSFSTKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTG 303

Query: 865 DKLCS*GVVEDSKCVFYDE 921
           D++ S     +  CVF  E
Sbjct: 304 DRMMSWNAGVNLSCVFCQE 322


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  184 bits (468), Expect = 4e-44
 Identities = 107/312 (34%), Positives = 160/312 (51%), Gaps = 11/312 (3%)
 Frame = +1

Query: 4    PLVDKIRSKIEGWSSKHISYAGKLVLINSVFFDLVNYWCQSVFIPEVVCKEIEKIIRSFL 183
            PL++K+ +++  W SK +S+AG+  LI+SV F L+N+W  +  +P+   K+IE +   FL
Sbjct: 641  PLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFL 700

Query: 184  WRGKSE---SNGVSWKTVILPKKEGGLGVKSIAEWNLTCMSQHILNIYRNKEGMWIKWIN 354
            W G  +   S+ VSW    LPK EGGLG +S  EWN T + + I  ++     +W +W  
Sbjct: 701  WAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQR 760

Query: 355  TYMMKGKSVWGVKPKRTDSWTWIELLKIRVSLKPFIQYAVGNGENVSFLFDSWHKLGFLN 534
             + +   S W V   +TD WTW  LL +R   + FI+  VGNG  VSF FD W  LG L 
Sbjct: 761  HHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLI 820

Query: 535  ENMSIRDISLLRIDPNDSVARALKKIKW--PRGRHAT-EMLSVCEGGLPELNP-----DC 690
            + +       LRI  +  VA A+    W  P  R  T + +      LP  +P       
Sbjct: 821  KYLGDVGSRPLRIPFSAKVADAIDGSGWRLPLSRSLTADSILSHLASLPPPSPLMVSDSY 880

Query: 691  SHVVL*NGALNVSSSVIWNVIRRN*PKPAWYNLVWFKGSIPKYSFILWLLCNGKMQTKDK 870
            S  V        S++  W V+R   P   W   VWFKG++PK++F  W     ++ T+ +
Sbjct: 881  SWCVDDVDCQGFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQR 940

Query: 871  LCS*GVVEDSKC 906
            L S G+V  ++C
Sbjct: 941  LVSWGLVSSAEC 952


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  184 bits (468), Expect = 4e-44
 Identities = 107/312 (34%), Positives = 160/312 (51%), Gaps = 11/312 (3%)
 Frame = +1

Query: 4    PLVDKIRSKIEGWSSKHISYAGKLVLINSVFFDLVNYWCQSVFIPEVVCKEIEKIIRSFL 183
            PL++K+ +++  W SK +S+AG+  LI+SV F L+N+W  +  +P+   K+IE +   FL
Sbjct: 641  PLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFL 700

Query: 184  WRGKSE---SNGVSWKTVILPKKEGGLGVKSIAEWNLTCMSQHILNIYRNKEGMWIKWIN 354
            W G  +   S+ VSW    LPK EGGLG +S  EWN T + + I  ++     +W +W  
Sbjct: 701  WAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQR 760

Query: 355  TYMMKGKSVWGVKPKRTDSWTWIELLKIRVSLKPFIQYAVGNGENVSFLFDSWHKLGFLN 534
             + +   S W V   +TD WTW  LL +R   + FI+  VGNG  VSF FD W  LG L 
Sbjct: 761  HHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLI 820

Query: 535  ENMSIRDISLLRIDPNDSVARALKKIKW--PRGRHAT-EMLSVCEGGLPELNP-----DC 690
            + +       LRI  +  VA A+    W  P  R  T + +      LP  +P       
Sbjct: 821  KYLGDVGSRPLRIPFSAKVADAIDGSGWRLPLSRSLTADSILSHLASLPPPSPLMVSDSY 880

Query: 691  SHVVL*NGALNVSSSVIWNVIRRN*PKPAWYNLVWFKGSIPKYSFILWLLCNGKMQTKDK 870
            S  V        S++  W V+R   P   W   VWFKG++PK++F  W     ++ T+ +
Sbjct: 881  SWCVDDVDCQGFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQR 940

Query: 871  LCS*GVVEDSKC 906
            L S G+V  ++C
Sbjct: 941  LVSWGLVSSAEC 952


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  184 bits (467), Expect = 5e-44
 Identities = 107/316 (33%), Positives = 162/316 (51%), Gaps = 13/316 (4%)
 Frame = +1

Query: 4    PLVDKIRSKIEGWSSKHISYAGKLVLINSVFFDLVNYWCQSVFIPEVVCKEIEKIIRSFL 183
            PL ++IR++I  W+S+++S+AG+L LI+SV +  +N+W  +  +P    KEI  I  +FL
Sbjct: 193  PLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFL 252

Query: 184  WRGKS---ESNGVSWKTVILPKKEGGLGVKSIAEWNLTCMSQHILNIYRNKEGMWIKWIN 354
            W G         VSW  +  PK+EGGLG++S+ E N+  + + I  +  N + +W+KW  
Sbjct: 253  WSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSK 312

Query: 355  TYMMKGKSVWGVKPKRT-DSWTWIELLKIRVSLKPFIQYAVGNGENVSFLFDSWHKLGFL 531
              ++K +S W + P  +  SW W ++LK R + KPF +  V NG   SF FD+W  +G L
Sbjct: 313  MNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMGHL 372

Query: 532  NENMSIRDISLLRIDPNDSVARALKKIKWPRGRHATEMLSVCEGGLPE----LNPDCSHV 699
             +    R    L I  N +VA A    +  R +H TE L+  E  L +     N      
Sbjct: 373  MDVTGQRGQIDLGISRNKTVAEAWSNRR--RRKHRTEQLNDIEAALNQKYQTRNLLREDA 430

Query: 700  VL*NGALNV-----SSSVIWNVIRRN*PKPAWYNLVWFKGSIPKYSFILWLLCNGKMQTK 864
             L  G  +V     S+   WN +R+   + AWY  VWF  S PKY F  WL    ++ T 
Sbjct: 431  TLWRGKGDVFKTSFSTKDTWNQVRKKSNEVAWYKGVWFSHSTPKYQFCTWLALRNRLSTG 490

Query: 865  DKLCS*GVVEDSKCVF 912
             ++       D KC F
Sbjct: 491  YRMQLWNNGSDVKCTF 506