BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004492
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17281.3| unnamed protein product [Vitis vinifera]              418   e-115
ref|XP_004139015.1| PREDICTED: small subunit processome componen...   364   2e-98
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm...   359   6e-97
ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated...   355   1e-95
ref|XP_003601650.1| Small subunit processome component-like prot...   345   7e-93

>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  418 bits (1075), Expect = e-115
 Identities = 209/321 (65%), Positives = 253/321 (78%)
 Frame = +2

Query: 2    PVKAEPSQGSSFFLDCLVECRELNTAEDFISFYEEMLPLVQTLPQIILQKEVILSKLLCR 181
            P+K EPS+GSSFF DCLV+ RELNTAEDFISFYEEM+PLVQTLPQ++L KE+I+SK+L R
Sbjct: 44   PLKTEPSEGSSFFRDCLVQWRELNTAEDFISFYEEMMPLVQTLPQVLLHKELIISKVLAR 103

Query: 182  MQMRGRLSLEPILRLIAALSRDLLADFLPFLRKIADSLVSLLESGADREPEIIEQIFTSW 361
            ++M  RLSLEP+LRLI ALSRDLL DF PFL+++  SLVSLL+SGADREPEIIEQIFTSW
Sbjct: 104  LEMTARLSLEPMLRLIGALSRDLLEDFFPFLQRVVGSLVSLLKSGADREPEIIEQIFTSW 163

Query: 362  SYILMYLQKYLTRDVIRVLKVTVKLRYYPKDYIQEFMAESVSFLLRNVPLEQLKEGIKKV 541
            SYI+MYLQKYL RD++ VLKVTVKLRYYPKDY+QEFMAE+VSFLLRN P+EQL +G++K+
Sbjct: 164  SYIMMYLQKYLIRDIVHVLKVTVKLRYYPKDYVQEFMAEAVSFLLRNAPVEQLIKGVRKI 223

Query: 542  IYEVSKKPLTMRKSAVSALLWYTMRGTGLRFHSGAKQVLMLLLDSSIFGIGDRIMEGSST 721
            + E  KKPL MRKS V AL +Y MRGT  RFHS A++VL LL+DSSI GIGD   +GS +
Sbjct: 224  MLEAVKKPLLMRKSGVCALFYYAMRGTSSRFHSRAEKVLRLLMDSSIVGIGDEFTQGSDS 283

Query: 722  VLEVLVVAFQRLCEEMDSSELCLMWDCLYEEIVESVSKPDIXXXXXXXXXXXXXXQNGYV 901
            V EV++  FQRLCEE++S EL L+WDC YE+I E V+                  Q    
Sbjct: 284  VAEVIITVFQRLCEELESKELNLLWDCFYEDITECVTNGCSMHLTRLLFLLVSTLQIDNG 343

Query: 902  RKISDYEQMLKVIGLLVERFI 964
             KISDY+ ML+++ LLV  FI
Sbjct: 344  LKISDYQPMLELVRLLVRTFI 364


>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
            sativus]
          Length = 2696

 Score =  364 bits (934), Expect = 2e-98
 Identities = 194/336 (57%), Positives = 238/336 (70%), Gaps = 17/336 (5%)
 Frame = +2

Query: 5    VKAEPSQGSSFFLDCLVECRELNTAEDFISFYEEMLPLVQTLPQIILQKEVILSKLLCRM 184
            VK+EPS+GSSFF DCL+E RELNTAEDFIS YEE++PLVQTLP +IL KE I S LL R+
Sbjct: 45   VKSEPSEGSSFFRDCLIEWRELNTAEDFISCYEEIIPLVQTLPLVILHKESIFSNLLSRV 104

Query: 185  QMRGRLSLEPILRLIAALSRDLLADFLPFLRKIADSLVSLLESGADREPEIIEQIFTSWS 364
            Q++ RLSLEPILRLIAAL+RDLL DFLPFL ++ D+LVSLLE GA REPEIIE IFTSWS
Sbjct: 105  QIKARLSLEPILRLIAALARDLLEDFLPFLSQLTDALVSLLEGGAAREPEIIEPIFTSWS 164

Query: 365  YILMYLQKYLTRDVIRVLKVTVKLRYYPKDYIQEFMAESVSFLLRNVPLEQLKEGIKKVI 544
            YI+MYLQKYLTR++  +L+VTV LRYY KDYIQ+FMAE+ SFLLRN P++QLK GIK++I
Sbjct: 165  YIMMYLQKYLTRNITDLLRVTVSLRYYSKDYIQDFMAEATSFLLRNAPVDQLKNGIKRII 224

Query: 545  YEVSKKPLTMRKSAVSALLWYTMRGTGLRFHSGAKQVLMLLLDSSIFGIGDRIME----- 709
             EV KKPL  R+   SALL++TMRGT  RFHS A+ V   L+   IF IG    +     
Sbjct: 225  LEVVKKPLATREYGTSALLFHTMRGTSSRFHSRAELVFRFLISGPIFEIGRDSSQVTAIS 284

Query: 710  ------------GSSTVLEVLVVAFQRLCEEMDSSELCLMWDCLYEEIVESVSKPDIXXX 853
                        GS  +LEVL    QRLCEEMD  EL ++W CL+EEI  ++S   +   
Sbjct: 285  IALIVSVRLSIPGSDAILEVLKCVCQRLCEEMDPQELEVIWKCLFEEITVAISNDYMVHI 344

Query: 854  XXXXXXXXXXXQNGYVRKISDYEQMLKVIGLLVERF 961
                       QN   +K+ DY+ ML+++ LLV +F
Sbjct: 345  NHLLMLLASAAQNVNWKKLHDYKPMLELVDLLVMKF 380


>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
           gi|223542637|gb|EEF44174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2535

 Score =  359 bits (921), Expect = 6e-97
 Identities = 189/320 (59%), Positives = 235/320 (73%)
 Frame = +2

Query: 5   VKAEPSQGSSFFLDCLVECRELNTAEDFISFYEEMLPLVQTLPQIILQKEVILSKLLCRM 184
           VK++PS+GSSFF DCLVE RELNTAEDFISFYE+M+PLVQTLP I+L KE I S+LL R+
Sbjct: 45  VKSQPSEGSSFFRDCLVEWRELNTAEDFISFYEKMMPLVQTLPLILLHKESIFSELLSRL 104

Query: 185 QMRGRLSLEPILRLIAALSRDLLADFLPFLRKIADSLVSLLESGADREPEIIEQIFTSWS 364
           QM+ RLSLEPILRLIAALSRDLL DF+ FL KI DS   LLE+GADREPEIIEQIFTSWS
Sbjct: 105 QMKARLSLEPILRLIAALSRDLLEDFIFFLPKIVDSFSFLLENGADREPEIIEQIFTSWS 164

Query: 365 YILMYLQKYLTRDVIRVLKVTVKLRYYPKDYIQEFMAESVSFLLRNVPLEQLKEGIKKVI 544
           YILMYLQKYL +DV+ VLKVT KLRYYPK Y+QEFMA + SFLLR+ P EQLK+GI+K++
Sbjct: 165 YILMYLQKYLVKDVVHVLKVTEKLRYYPKVYVQEFMAAATSFLLRSAPNEQLKKGIRKIM 224

Query: 545 YEVSKKPLTMRKSAVSALLWYTMRGTGLRFHSGAKQVLMLLLDSSIFGIGDRIMEGSSTV 724
           +EV KKPL +RK  VS LL++TMRGT  RFHS A +VL LL +S               +
Sbjct: 225 FEVVKKPLLVRKPGVSGLLYHTMRGTPSRFHSRADRVLQLLTES------------VDVI 272

Query: 725 LEVLVVAFQRLCEEMDSSELCLMWDCLYEEIVESVSKPDIXXXXXXXXXXXXXXQNGYVR 904
           +EV+  AFQR CE+M+  EL ++W+CLY++I E     D                     
Sbjct: 273 IEVITSAFQRECEDMEPKELAMLWNCLYQKI-EKALNDDYRHLSCLLSLLISTVSIHDGA 331

Query: 905 KISDYEQMLKVIGLLVERFI 964
           K+SDY+ M++++  +V++F+
Sbjct: 332 KVSDYQPMIELVRSIVQKFV 351


>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine
            max]
          Length = 2653

 Score =  355 bits (910), Expect = 1e-95
 Identities = 180/320 (56%), Positives = 240/320 (75%)
 Frame = +2

Query: 5    VKAEPSQGSSFFLDCLVECRELNTAEDFISFYEEMLPLVQTLPQIILQKEVILSKLLCRM 184
            VKAEPS+GSSFF DCL+E RELNTAEDFIS YEE++P  QTLP ++L KE ++SKLL R+
Sbjct: 45   VKAEPSEGSSFFRDCLIEWRELNTAEDFISLYEEIMPYTQTLPLVLLHKESLISKLLSRL 104

Query: 185  QMRGRLSLEPILRLIAALSRDLLADFLPFLRKIADSLVSLLESGADREPEIIEQIFTSWS 364
             ++ RLSLEPILRLIAALSRDLL +F+P L +I DSLVSLLESG DREP+IIEQIF SWS
Sbjct: 105  HIKARLSLEPILRLIAALSRDLLEEFVPLLPRIVDSLVSLLESGGDREPDIIEQIFMSWS 164

Query: 365  YILMYLQKYLTRDVIRVLKVTVKLRYYPKDYIQEFMAESVSFLLRNVPLEQLKEGIKKVI 544
            YI+MYLQKYL R+   VLKVT KLRYYPK+Y+Q+FMAE++SF+LRN P EQLK GI++VI
Sbjct: 165  YIMMYLQKYLVRNPSEVLKVTSKLRYYPKEYVQQFMAEAMSFVLRNAPDEQLKRGIRRVI 224

Query: 545  YEVSKKPLTMRKSAVSALLWYTMRGTGLRFHSGAKQVLMLLLDSSIFGIGDRIMEGSSTV 724
             +  KKP   R+S V AL++  M+G   RFHS A++VL LL   +I+ IGD+  + S  +
Sbjct: 225  DDAVKKPSLCRESGVEALVFNIMKGHSSRFHSKAERVLQLLTSEAIYPIGDKADQDSMII 284

Query: 725  LEVLVVAFQRLCEEMDSSELCLMWDCLYEEIVESVSKPDIXXXXXXXXXXXXXXQNGYVR 904
            L+++   F++LCE+M+S EL L+W+C+Y+E+ E ++  +               +    +
Sbjct: 285  LKIVKSVFKKLCEKMESKELDLVWNCIYKEVNECLNTGNSRHLRHILSVLVSAIKVQNGQ 344

Query: 905  KISDYEQMLKVIGLLVERFI 964
            K+SDY+ ML+++ LLV+ FI
Sbjct: 345  KVSDYKPMLELVLLLVQTFI 364


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
            gi|355490698|gb|AES71901.1| Small subunit processome
            component-like protein [Medicago truncatula]
          Length = 2733

 Score =  345 bits (886), Expect = 7e-93
 Identities = 182/334 (54%), Positives = 234/334 (70%), Gaps = 14/334 (4%)
 Frame = +2

Query: 5    VKAEPSQGSSFFLDCLVECRELNTAEDFISFYEEMLPLVQTLPQIILQKEVILSKLLCRM 184
            VKAEPS+GSSFF DCLVE RELNT EDFIS YEE++P  QTLP ++L KE ++SKLL R+
Sbjct: 45   VKAEPSEGSSFFRDCLVEWRELNTTEDFISLYEEVIPCTQTLPLVLLHKETLISKLLSRL 104

Query: 185  QMRGRLSLEPILRLIAALSRDLLADFLPFLRKIADSLVSLLESGADREPEIIEQIFTSWS 364
             M+ RLSLEPILRLIAALSRDLL +F+P   +I DSL SLLESGADREP+IIEQIFTSWS
Sbjct: 105  HMKARLSLEPILRLIAALSRDLLDEFIPLFPRIVDSLASLLESGADREPDIIEQIFTSWS 164

Query: 365  YILMYLQKYLTRDVIRVLKVTVKLRYYPKDYIQEFMAESVSFLLRNVPLEQLKEGIKKVI 544
            Y++MYLQKYL R+   VLKVT KLRYYPK+Y+++FMAE++SF+LRN P  QLK GI++VI
Sbjct: 165  YVMMYLQKYLIRNPSEVLKVTSKLRYYPKEYVRQFMAEAMSFVLRNAPDVQLKRGIERVI 224

Query: 545  YEVSKKPLTMRKSAVSALLWYTMRGTGLRFHSGAKQVLMLLLDSSIFGIGDRIMEG---- 712
             EV+KKP   R+S V  LL+  M+G   RFHS A++VL LL   +I+ IGD   +G    
Sbjct: 225  TEVAKKPSPFRESGVELLLYNIMKGYSSRFHSKAERVLQLLTSKTIYHIGDGDDQGKDGD 284

Query: 713  ----------SSTVLEVLVVAFQRLCEEMDSSELCLMWDCLYEEIVESVSKPDIXXXXXX 862
                      SST+L ++   F++LCE  +  EL L+W CLY E+ E V+  +I      
Sbjct: 285  DQGKDGDDQESSTILNIIKSVFKKLCETTEPKELNLVWSCLYNEVHECVTTENIGHLRRI 344

Query: 863  XXXXXXXXQNGYVRKISDYEQMLKVIGLLVERFI 964
                    +    + +SDY+ ML+++ LLV  +I
Sbjct: 345  LSVLVSAIKVQKGQNVSDYKPMLELVLLLVRSYI 378