BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004483
         (1880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21248.3| unnamed protein product [Vitis vinifera]              681   0.0  
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   681   0.0  
ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|2...   679   0.0  
ref|XP_004150202.1| PREDICTED: transcription-repair-coupling fac...   665   0.0  
ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arab...   664   0.0  

>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  681 bits (1757), Expect = 0.0
 Identities = 342/421 (81%), Positives = 376/421 (89%)
 Frame = +1

Query: 1    QRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIRTHLS 180
            QRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPI THLS
Sbjct: 220  QRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIITHLS 279

Query: 181  AFIKEKVKLAIKHELDRDGQVFYVLPRIKGLEEVREFLEESFPNIDIAIAHGKQYSKQLE 360
            A+ KEK+  AIK EL R GQ+FYVLPRIKGLEEV EFLE SFP+++IAIAHGKQYSKQLE
Sbjct: 280  AYNKEKIISAIKFELGRGGQIFYVLPRIKGLEEVMEFLECSFPDVEIAIAHGKQYSKQLE 339

Query: 361  DTMERFAQGEIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAH 540
            +TM+RFAQGEIKILICTNIVESGLDIQNANTII+Q+VQQFGLAQLYQLRGRVGRADKEAH
Sbjct: 340  ETMDRFAQGEIKILICTNIVESGLDIQNANTIIIQEVQQFGLAQLYQLRGRVGRADKEAH 399

Query: 541  AYLFYPDKSMLTDQXXXXXXXXXXXXXXGQGFQLAERDMAIRGFGNIFGEQQTGDVGNVG 720
            AYLFYPDKS+L+DQ              GQGFQLAERDM IRGFGNIFGEQQTGDVGNVG
Sbjct: 400  AYLFYPDKSLLSDQALERLSALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVG 459

Query: 721  IDLFFEMLFESLSKVDEHRIISVPYQSVQLELNINPHLPSEYINYLENPIEIINEAERTA 900
            IDLFFEMLFESLSKV+EHR+ISVPYQSVQ ++NINPHLPSEYINYLENP+EII+EAE++A
Sbjct: 460  IDLFFEMLFESLSKVEEHRLISVPYQSVQFDININPHLPSEYINYLENPMEIISEAEKSA 519

Query: 901  EEDIWSLMQFTENLRRHYGKEPFSMEILLKKLYVKRMSADLGITRIYASRKMVVMETNIN 1080
            EEDIWSLMQFTENLRR YGKEP+SME+LLKKLYVKRM+ADLGITRIYAS K V+M T +N
Sbjct: 520  EEDIWSLMQFTENLRRQYGKEPYSMEVLLKKLYVKRMAADLGITRIYASGKTVIMRTKMN 579

Query: 1081 KKVFRLIIDSLSSDMYRNSLVFEDGQIKAXXXXXXXXXXXXNWIFQCLAELYAALPALIK 1260
            KKVF+LI DS++SD+ RNSLVFE+ QIKA            NW+FQCLAEL+A+LPALIK
Sbjct: 580  KKVFKLITDSMASDIIRNSLVFEENQIKAELLLELPREQFLNWVFQCLAELHASLPALIK 639

Query: 1261 Y 1263
            Y
Sbjct: 640  Y 640


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis vinifera]
          Length = 823

 Score =  681 bits (1757), Expect = 0.0
 Identities = 342/421 (81%), Positives = 376/421 (89%)
 Frame = +1

Query: 1    QRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIRTHLS 180
            QRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPI THLS
Sbjct: 403  QRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIITHLS 462

Query: 181  AFIKEKVKLAIKHELDRDGQVFYVLPRIKGLEEVREFLEESFPNIDIAIAHGKQYSKQLE 360
            A+ KEK+  AIK EL R GQ+FYVLPRIKGLEEV EFLE SFP+++IAIAHGKQYSKQLE
Sbjct: 463  AYNKEKIISAIKFELGRGGQIFYVLPRIKGLEEVMEFLECSFPDVEIAIAHGKQYSKQLE 522

Query: 361  DTMERFAQGEIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAH 540
            +TM+RFAQGEIKILICTNIVESGLDIQNANTII+Q+VQQFGLAQLYQLRGRVGRADKEAH
Sbjct: 523  ETMDRFAQGEIKILICTNIVESGLDIQNANTIIIQEVQQFGLAQLYQLRGRVGRADKEAH 582

Query: 541  AYLFYPDKSMLTDQXXXXXXXXXXXXXXGQGFQLAERDMAIRGFGNIFGEQQTGDVGNVG 720
            AYLFYPDKS+L+DQ              GQGFQLAERDM IRGFGNIFGEQQTGDVGNVG
Sbjct: 583  AYLFYPDKSLLSDQALERLSALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVG 642

Query: 721  IDLFFEMLFESLSKVDEHRIISVPYQSVQLELNINPHLPSEYINYLENPIEIINEAERTA 900
            IDLFFEMLFESLSKV+EHR+ISVPYQSVQ ++NINPHLPSEYINYLENP+EII+EAE++A
Sbjct: 643  IDLFFEMLFESLSKVEEHRLISVPYQSVQFDININPHLPSEYINYLENPMEIISEAEKSA 702

Query: 901  EEDIWSLMQFTENLRRHYGKEPFSMEILLKKLYVKRMSADLGITRIYASRKMVVMETNIN 1080
            EEDIWSLMQFTENLRR YGKEP+SME+LLKKLYVKRM+ADLGITRIYAS K V+M T +N
Sbjct: 703  EEDIWSLMQFTENLRRQYGKEPYSMEVLLKKLYVKRMAADLGITRIYASGKTVIMRTKMN 762

Query: 1081 KKVFRLIIDSLSSDMYRNSLVFEDGQIKAXXXXXXXXXXXXNWIFQCLAELYAALPALIK 1260
            KKVF+LI DS++SD+ RNSLVFE+ QIKA            NW+FQCLAEL+A+LPALIK
Sbjct: 763  KKVFKLITDSMASDIIRNSLVFEENQIKAELLLELPREQFLNWVFQCLAELHASLPALIK 822

Query: 1261 Y 1263
            Y
Sbjct: 823  Y 823


>ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|222861200|gb|EEE98742.1|
            predicted protein [Populus trichocarpa]
          Length = 817

 Score =  679 bits (1751), Expect = 0.0
 Identities = 338/421 (80%), Positives = 376/421 (89%)
 Frame = +1

Query: 1    QRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIRTHLS 180
            QRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPI+THLS
Sbjct: 397  QRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTHLS 456

Query: 181  AFIKEKVKLAIKHELDRDGQVFYVLPRIKGLEEVREFLEESFPNIDIAIAHGKQYSKQLE 360
            A+ K+K+  AIK+ELDR GQVFYVLPRIKGLEEV++FLE+SFPN++IA+AHG+QYSKQLE
Sbjct: 457  AYNKDKLISAIKYELDRGGQVFYVLPRIKGLEEVKDFLEQSFPNVEIAVAHGQQYSKQLE 516

Query: 361  DTMERFAQGEIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAH 540
            DTME+FAQGEIKILICTNIVESGLDIQNANTII+QDVQ FGLAQLYQLRGRVGRADKEAH
Sbjct: 517  DTMEQFAQGEIKILICTNIVESGLDIQNANTIIIQDVQLFGLAQLYQLRGRVGRADKEAH 576

Query: 541  AYLFYPDKSMLTDQXXXXXXXXXXXXXXGQGFQLAERDMAIRGFGNIFGEQQTGDVGNVG 720
            A+LFYPDKSMLTDQ              GQGFQLAERDM IRGFG IFGEQQTGDVGNVG
Sbjct: 577  AHLFYPDKSMLTDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVG 636

Query: 721  IDLFFEMLFESLSKVDEHRIISVPYQSVQLELNINPHLPSEYINYLENPIEIINEAERTA 900
            +D FFEMLFESLSKVDEHR+ISVPYQSVQ++LNINPHLPS+YINYLENP+EIINEAE+ A
Sbjct: 637  VDFFFEMLFESLSKVDEHRVISVPYQSVQIDLNINPHLPSDYINYLENPMEIINEAEKAA 696

Query: 901  EEDIWSLMQFTENLRRHYGKEPFSMEILLKKLYVKRMSADLGITRIYASRKMVVMETNIN 1080
            E DIWSLMQFTENLRR YGKEP SMEI+LKKLYV+RM+AD+GITRIYAS KMV METN++
Sbjct: 697  ETDIWSLMQFTENLRRQYGKEPSSMEIILKKLYVRRMAADIGITRIYASGKMVGMETNMS 756

Query: 1081 KKVFRLIIDSLSSDMYRNSLVFEDGQIKAXXXXXXXXXXXXNWIFQCLAELYAALPALIK 1260
            KKVF+L+ DS+SS+M+RNSL F+  +IKA            NWIFQC+AEL+A LPALIK
Sbjct: 757  KKVFKLMTDSMSSEMHRNSLFFDGNEIKAELLLELPRAQLLNWIFQCIAELHACLPALIK 816

Query: 1261 Y 1263
            Y
Sbjct: 817  Y 817


>ref|XP_004150202.1| PREDICTED: transcription-repair-coupling factor-like [Cucumis
            sativus] gi|449515466|ref|XP_004164770.1| PREDICTED:
            transcription-repair-coupling factor-like [Cucumis
            sativus]
          Length = 827

 Score =  665 bits (1715), Expect = 0.0
 Identities = 331/421 (78%), Positives = 374/421 (88%)
 Frame = +1

Query: 1    QRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIRTHLS 180
            QRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPERVPI+THLS
Sbjct: 407  QRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLS 466

Query: 181  AFIKEKVKLAIKHELDRDGQVFYVLPRIKGLEEVREFLEESFPNIDIAIAHGKQYSKQLE 360
            +F KEKVK AIK+EL+R GQVFYVLPRIKGLEEV+EFLE SFP+I+IA+AHGKQYSKQLE
Sbjct: 467  SFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLE 526

Query: 361  DTMERFAQGEIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAH 540
            +TME FA G+IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+
Sbjct: 527  ETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAY 586

Query: 541  AYLFYPDKSMLTDQXXXXXXXXXXXXXXGQGFQLAERDMAIRGFGNIFGEQQTGDVGNVG 720
            AYLFYPDKS+L+D               GQGFQLAERDM IRGFG IFGEQQTGDVGNVG
Sbjct: 587  AYLFYPDKSLLSDDALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVG 646

Query: 721  IDLFFEMLFESLSKVDEHRIISVPYQSVQLELNINPHLPSEYINYLENPIEIINEAERTA 900
            IDLFFEMLF+SLSKVDEHR++SVPYQSV+++++INPHLPSEYINYLENP++I+N AER A
Sbjct: 647  IDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAERAA 706

Query: 901  EEDIWSLMQFTENLRRHYGKEPFSMEILLKKLYVKRMSADLGITRIYASRKMVVMETNIN 1080
            E DIW+LMQFTENLRRH+GKEP+SMEILLKKLYV+RM+ADLGI+RIYAS K V METN+N
Sbjct: 707  ETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETNMN 766

Query: 1081 KKVFRLIIDSLSSDMYRNSLVFEDGQIKAXXXXXXXXXXXXNWIFQCLAELYAALPALIK 1260
            KKVF+LI DS++S+++RN L FE+ QIKA            NWIF+CL EL+A+ PALIK
Sbjct: 767  KKVFKLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASFPALIK 826

Query: 1261 Y 1263
            Y
Sbjct: 827  Y 827


>ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arabidopsis lyrata subsp.
            lyrata] gi|297330086|gb|EFH60505.1| hypothetical protein
            ARALYDRAFT_477305 [Arabidopsis lyrata subsp. lyrata]
          Length = 823

 Score =  664 bits (1713), Expect = 0.0
 Identities = 331/421 (78%), Positives = 374/421 (88%)
 Frame = +1

Query: 1    QRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIRTHLS 180
            QRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLISTPPPER+PI+THLS
Sbjct: 403  QRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERIPIKTHLS 462

Query: 181  AFIKEKVKLAIKHELDRDGQVFYVLPRIKGLEEVREFLEESFPNIDIAIAHGKQYSKQLE 360
            +F KEKV  AIK+ELDR GQVFYVLPRIKGLEEV +FLEE+FP+IDIA+AHGKQYSKQLE
Sbjct: 463  SFRKEKVIEAIKNELDRGGQVFYVLPRIKGLEEVMDFLEEAFPDIDIAMAHGKQYSKQLE 522

Query: 361  DTMERFAQGEIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAH 540
            +TMERFAQG+IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAH
Sbjct: 523  ETMERFAQGKIKILICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAH 582

Query: 541  AYLFYPDKSMLTDQXXXXXXXXXXXXXXGQGFQLAERDMAIRGFGNIFGEQQTGDVGNVG 720
            AYLFYPDKS+L+DQ              GQGFQLAERDM IRGFG IFGEQQTGDVGNVG
Sbjct: 583  AYLFYPDKSLLSDQALERLSALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVG 642

Query: 721  IDLFFEMLFESLSKVDEHRIISVPYQSVQLELNINPHLPSEYINYLENPIEIINEAERTA 900
            IDLFFEMLFESLSKV+E RI SVPY  V++++NINP LPSEY+NYLENP+EIINEAE+ A
Sbjct: 643  IDLFFEMLFESLSKVEELRIFSVPYDLVKIDININPRLPSEYVNYLENPMEIINEAEKAA 702

Query: 901  EEDIWSLMQFTENLRRHYGKEPFSMEILLKKLYVKRMSADLGITRIYASRKMVVMETNIN 1080
            E+D+WSLMQFTENLRR YGKEP+SMEI+LKKLYV+RM+ADLG+ RIYAS KMVVM+TN++
Sbjct: 703  EKDMWSLMQFTENLRRQYGKEPYSMEIILKKLYVRRMAADLGVNRIYASGKMVVMKTNMS 762

Query: 1081 KKVFRLIIDSLSSDMYRNSLVFEDGQIKAXXXXXXXXXXXXNWIFQCLAELYAALPALIK 1260
            KKVF+LI DS++ D+YR+SL++E  QI A            NW+FQCL+EL+A+LPALIK
Sbjct: 763  KKVFKLITDSMTCDVYRSSLIYEGDQIMAELLLELPREQLLNWMFQCLSELHASLPALIK 822

Query: 1261 Y 1263
            Y
Sbjct: 823  Y 823